>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular|
           protein of testis) (Proliferation potential-related
           protein) (Protein P2P-R)
          Length = 1790

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -2

Query: 348 CLLCGNRASTDLPVILCCSHSS-----ETQQMYLRDLSCPTCH 235
           CL+C +   TD  VI CC +S       T  +   + +CPTCH
Sbjct: 260 CLICKD-IMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH 301

>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular|
           protein of testis) (Proliferation potential-related
           protein) (Protein P2P-R) (Retinoblastoma-binding Q
           protein 1) (Protein RBQ-1)
          Length = 1792

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -2

Query: 348 CLLCGNRASTDLPVILCCSHSS-----ETQQMYLRDLSCPTCH 235
           CL+C +   TD  VI CC +S       T  +   + +CPTCH
Sbjct: 259 CLICKD-IMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH 300

>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)|
          Length = 943

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 363  DQNSQCLLCGNRASTDLPVILCCSHSSETQQMYLRDLSCPTCHSGI 226
            DQNS C++C +       V+L C HSS       +   CP C S I
Sbjct: 893  DQNS-CVICASNPPNI--VLLPCRHSSLCSDCCSKLTKCPICRSHI 935

>HMP_DICD3 (Q47266) Flavohemoprotein (Hemoglobin-like protein)|
           (Flavohemoglobin) (Nitric oxide dioxygenase) (EC
           1.14.12.17) (NO oxygenase) (NOD) (Hemoprotein X)
          Length = 395

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +3

Query: 27  NTPGPKDMNKFPVFNEQSRSQHDVLFRNIDGYLQHRRHLAVDMPAFSDXXXXXXXXXXHP 206
           + P  KD+  F + N+++  Q + LF  I  Y  H  +L   +PA              P
Sbjct: 35  HNPELKDI--FNMSNQRNGDQREALFNAICAYATHIENLPALLPAVERIAQKHASFNIQP 92

Query: 207 DQFTI 221
           +Q+ I
Sbjct: 93  EQYQI 97

>QUEA_DEHE1 (Q3Z8C1) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 343

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 39  PKDMNKFPVFNEQSRSQHDVLFRNIDGYLQ 128
           P+D ++  V N QS      +FR+I GY Q
Sbjct: 22  PRDSSRLLVLNRQSGELKSCIFRDITGYFQ 51

>CHRD_XENLA (Q91713) Chordin precursor (Organizer-specific secreted dorsalizing|
           factor)
          Length = 941

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 369 SPDQNSQCLLCGNRASTDLPVILCCSHSSETQQMYLRDLSCPTC 238
           +PD + +C +C  +  T +   + C   + +Q ++L D  CP C
Sbjct: 707 APDYDRKCSVCSCQKRTVICDPIVCPPLNCSQPVHLPDQCCPVC 750


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,221,187
Number of Sequences: 219361
Number of extensions: 1324571
Number of successful extensions: 3198
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)