| Clone Name | bast46c02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL773531.6| Mouse DNA sequence from clone RP23-179F21 on chromosome 2, complete sequence Length = 202065 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttccc 27 |||||||||||||||||||||||| Sbjct: 9945 cttcttctcctcccccttcttccc 9968 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttc 25 |||||||||||||||||||||| Sbjct: 9927 cttcttctcctcccccttcttc 9948 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttc 25 |||||||||||||||||||||| Sbjct: 9909 cttcttctcctcccccttcttc 9930
>gb|AY855168.1| Rattus norvegicus RPGR mRNA, partial cds Length = 1719 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttcttcc 26 ||||||||||||||||||||||| Sbjct: 1099 cttcttctcctcccccttcttcc 1077 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttcttcc 26 ||||||||||||||||||||||| Sbjct: 1009 cttcttctcctcccccttcttcc 987
>gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258F1, complete sequence Length = 118461 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||| ||||||||||||||||| Sbjct: 58550 ccttcttcccctcccccttcttcccc 58525
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ctagtgttgtacacttgtactg 199 |||||||||||||||||||||| Sbjct: 49293 ctagtgttgtacacttgtactg 49314
>gb|AC115804.7| Mus musculus chromosome 14, clone RP23-411N8, complete sequence Length = 220114 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||| ||||||||||||||||| Sbjct: 122765 ccttcttcccctcccccttcttcccc 122740
>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence Length = 211533 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 6 tcttctcctcccccttcttcccccct 31 ||||||||||||| |||||||||||| Sbjct: 22710 tcttctcctcccctttcttcccccct 22685
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ctagtgttgtacacttgtactg 199 |||||||||||||||||||||| Sbjct: 28521600 ctagtgttgtacacttgtactg 28521621
>gb|AC140312.5| Mus musculus BAC clone RP23-423L24 from chromosome 3, complete sequence Length = 200387 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttcttccccc 29 ||||||||||||||| |||||||||| Sbjct: 165763 cttcttctcctcccctttcttccccc 165738
>emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on chromosome X, complete sequence Length = 222627 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||| ||||||||||||||||| Sbjct: 37039 ccttcttcccctcccccttcttcccc 37064 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||| ||||||||||||||||| Sbjct: 36976 ccttcttcccctcccccttcttcccc 37001
>gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosome 6, complete sequence Length = 182232 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||| ||||||||||||||||| Sbjct: 34750 ccttcttcccctcccccttcttcccc 34775
>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence Length = 195319 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccc 28 |||||||||||| ||||||||||||| Sbjct: 82428 ccttcttctccttccccttcttcccc 82453 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttccc 27 |||||||||||| |||||||||||| Sbjct: 84895 ccttcttctccttccccttcttccc 84919
>gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, complete sequence Length = 218174 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttcccccc 30 ||||||||||||||||||||| Sbjct: 62335 ctcctcccccttcttcccccc 62355
>gb|AC160105.2| Mus musculus BAC clone RP24-353L12 from chromosome 13, complete sequence Length = 138509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ttctcctcccccttcttcccc 28 ||||||||||||||||||||| Sbjct: 55198 ttctcctcccccttcttcccc 55178
>gb|AC135640.5| Mus musculus BAC clone RP23-362A12 from chromosome 7, complete sequence Length = 205974 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccccct 31 |||||||| ||| |||||||||||||||| Sbjct: 166378 ccttcttccccttccccttcttcccccct 166406
>gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome 7, complete sequence Length = 184312 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccccct 31 |||||||| ||| |||||||||||||||| Sbjct: 8924 ccttcttccccttccccttcttcccccct 8952
>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence Length = 159308 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttcccc 28 ||||||||||||| ||||||||||| Sbjct: 86075 cttcttctcctcctccttcttcccc 86099
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcttctcctcccccttcttcc 26 ||||||||||||||||||||| Sbjct: 131305 tcttctcctcccccttcttcc 131325
>emb|AJ237815.1|PAD237815 Porcine adenovirus serotype 3 complete genome, strain IAF Length = 34094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 ctcctcccccttcttcccccc 30 ||||||||||||||||||||| Sbjct: 4024 ctcctcccccttcttcccccc 4004
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 gtttgtccccttcccctcctt 335 ||||||||||||||||||||| Sbjct: 3447 gtttgtccccttcccctcctt 3467
>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence Length = 203706 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttccc 27 |||||||||||||||||| |||||| Sbjct: 18595 ccttcttctcctccccctccttccc 18571
>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence Length = 81252 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cccccatcctgttcctcctcc 425 ||||||||||||||||||||| Sbjct: 59813 cccccatcctgttcctcctcc 59833
>gb|AC104307.2| Homo sapiens chromosome 3 clone RP11-527M19, complete sequence Length = 182639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 aatttgctcttcagtcattga 295 ||||||||||||||||||||| Sbjct: 123628 aatttgctcttcagtcattga 123608
>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library) complete sequence Length = 236281 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 tcctcttgtcactctcttgccccca 410 |||||||||| |||||||||||||| Sbjct: 151303 tcctcttgtctctctcttgccccca 151327
>gb|AC108065.3| Homo sapiens BAC clone RP11-496N17 from 4, complete sequence Length = 111908 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccccct 31 |||||||||||||| |||||| ||||||| Sbjct: 57221 ccttcttctcctcctccttctccccccct 57249
>gb|AC114288.2| Homo sapiens chromosome 5 clone CTD-2373J16, complete sequence Length = 84270 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ccctctacctttttctctctc 70 ||||||||||||||||||||| Sbjct: 3750 ccctctacctttttctctctc 3770
>gb|AC114307.2| Homo sapiens chromosome 5 clone RP11-195J17, complete sequence Length = 83767 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ccctctacctttttctctctc 70 ||||||||||||||||||||| Sbjct: 80302 ccctctacctttttctctctc 80322
>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178328 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttcccc 28 |||||||||||||||||||| |||| Sbjct: 68311 cttcttctcctcccccttctccccc 68335
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctgaatttgctcttcagtca 291 ||||||||||||||||||||| Sbjct: 506966 tctgaatttgctcttcagtca 506946
>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence Length = 173036 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttccc 27 |||||||||||||||||| |||||| Sbjct: 75306 ccttcttctcctccccctccttccc 75330
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ctctagtgttgtacacttgtactgc 200 |||| |||||||||||||||||||| Sbjct: 23471157 ctctcgtgttgtacacttgtactgc 23471133
>gb|AC092458.5| Homo sapiens BAC clone RP13-612N21 from 4, complete sequence Length = 126619 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cccccatcctgttcctcctcc 425 ||||||||||||||||||||| Sbjct: 61719 cccccatcctgttcctcctcc 61699
>gb|AC006968.2|AC006968 Homo sapiens PAC clone RP4-649M7 from Xq23, complete sequence Length = 96280 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctctacctttttctctctca 71 ||||||||||||||||||||| Sbjct: 47080 cctctacctttttctctctca 47060
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 cttctcctcccccttcttcccccct 31 |||||||||| |||||||||||||| Sbjct: 203162 cttctcctcctccttcttcccccct 203186
>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence Length = 203755 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 atttgctcttcagtcattgac 296 ||||||||||||||||||||| Sbjct: 104492 atttgctcttcagtcattgac 104472
>gb|AC174451.3| Mus musculus BAC clone RP23-182A1 from chromosome 3, complete sequence Length = 205136 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttccc 27 |||||||||||| |||||||||||| Sbjct: 185772 ccttcttctccttccccttcttccc 185748
>gb|AF247039.1|AF247039 Porcine adenovirus 3 171R (E1A), 202R (E1B-1), 474R (E1B-2), 288R (288R), 198R (pIX), 163R* (163R*), 162R (162R), 97R (97R) and 184R (184R) genes, complete cds; and IVa2 (IVa2) gene, partial cds Length = 4769 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 ctcctcccccttcttcccccc 30 ||||||||||||||||||||| Sbjct: 4022 ctcctcccccttcttcccccc 4002
>emb|BX511169.2|RN224C24 Rattus norvegicus chromosome 1 BAC RP32-224C24, complete sequence Length = 163386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttcttc 25 ||||||||||||||||||||| Sbjct: 108911 ttcttctcctcccccttcttc 108931
>emb|AL929026.10| Mouse DNA sequence from clone RP23-332K7 on chromosome 2, complete sequence Length = 124244 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttct 23 ||||||||||||||||||||| Sbjct: 14325 ccttcttctcctcccccttct 14305
>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence Length = 156420 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttcttcccc 28 |||||||||||||||||||| |||| Sbjct: 129085 cttcttctcctcccccttctccccc 129061
>gb|AF083132.1|AF083132 Porcine adenovirus 3 strain 6618, complete genome Length = 34094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 ctcctcccccttcttcccccc 30 ||||||||||||||||||||| Sbjct: 4024 ctcctcccccttcttcccccc 4004
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ctctagtgttgtacacttgtactgc 200 |||| |||||||||||||||||||| Sbjct: 27060 ctctcgtgttgtacacttgtactgc 27036
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence Length = 226568 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttcttcccc 28 ||||||||||||| ||||||||||| Sbjct: 202504 cttcttctcctcctccttcttcccc 202528
>emb|AL672019.7| Mouse DNA sequence from clone RP23-33P21 on chromosome X, complete sequence Length = 192874 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttcttc 25 ||||||||||||||||||||| Sbjct: 116307 ttcttctcctcccccttcttc 116327
>dbj|AB026117.1| Porcine adenovirus 3 DNA, complete genome Length = 34094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 ctcctcccccttcttcccccc 30 ||||||||||||||||||||| Sbjct: 4024 ctcctcccccttcttcccccc 4004
>dbj|AP001966.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2002A22, complete sequence Length = 128151 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcccccct 31 |||||||||||||| |||||| ||||||| Sbjct: 19307 ccttcttctcctcctccttctccccccct 19279
>gb|AC166114.5| Mus musculus BAC clone RP23-63J20 from chromosome 16, complete sequence Length = 207146 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcc 26 |||||| ||||||||||||||||| Sbjct: 7580 ccttctcctcctcccccttcttcc 7603
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 82826 ccttcttctcctcctccttcttcc 82803
>gb|AC164647.3| Mus musculus BAC clone RP23-463P13 from chromosome 16, complete sequence Length = 181953 Score = 40.1 bits (20), Expect = 5.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 3 ccttcttctcc-tcccccttcttccccc 29 ||||||||||| |||||||||||||||| Sbjct: 39981 ccttcttctccctcccccttcttccccc 39954 Score = 40.1 bits (20), Expect = 5.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 3 ccttcttctc-ctcccccttcttccccc 29 |||||||||| ||||||||||||||||| Sbjct: 39910 ccttcttctcactcccccttcttccccc 39883
>gb|AC138204.7| Mus musculus chromosome 3, clone RP23-381G8, complete sequence Length = 173792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 119700 cctcccccttcttcccccct 119719
>gb|BT018673.1| Zea mays clone EL01N0510E07.d mRNA sequence Length = 1429 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttc 22 |||||||||||||||||||| Sbjct: 176 ccttcttctcctcccccttc 157
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttcttcccc 28 |||||| ||||||||||||||||| Sbjct: 498194 ttcttcccctcccccttcttcccc 498217
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 20290 cttcttctcctcccccttct 20309
>gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P12, complete sequence Length = 165197 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttcttcccc 28 |||||| ||||||||||||||||| Sbjct: 92240 ttcttcccctcccccttcttcccc 92263
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctctctgaactctctcctct 391 |||||||||||||||||||| Sbjct: 148904 ctctctgaactctctcctct 148885
>gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, complete sequence Length = 146346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcctcccccttcttcccccc 30 |||||||||||||||||||| Sbjct: 41765 tcctcccccttcttcccccc 41746
>gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome 13, complete sequence Length = 212761 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 138692 ctcctcccccttcttccccc 138711
>gb|AC004540.1| Homo sapiens PAC clone RP5-1066K24 from 7, complete sequence Length = 131757 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agccagctcttgaattcttg 175 |||||||||||||||||||| Sbjct: 65004 agccagctcttgaattcttg 65023
>gb|AC117690.10| Mus musculus chromosome 16, clone RP23-446I8, complete sequence Length = 189033 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcc 26 |||||| ||||||||||||||||| Sbjct: 70250 ccttctcctcctcccccttcttcc 70273
>ref|XM_549448.2| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 4E binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I) (LOC475590), mRNA Length = 1025 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tctcctcccccttcttcccc 28 |||||||||||||||||||| Sbjct: 748 tctcctcccccttcttcccc 767
>gb|AC122036.3| Mus musculus BAC clone RP24-420C18 from chromosome 8, complete sequence Length = 209062 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gcactgccagccagctcttg 167 |||||||||||||||||||| Sbjct: 138459 gcactgccagccagctcttg 138478
>gb|AC141476.3| Mus musculus BAC clone RP24-170D4 from chromosome 13, complete sequence Length = 146228 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 44679 ctcctcccccttcttccccc 44698
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 688 ccttcttctcctcctccttcttcc 665 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 520 ccttcttctcctcctccttcttcc 497
>gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome 3, complete sequence Length = 165361 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccccatcctgttcctcctcc 425 |||||||||||||||||||| Sbjct: 49300 ccccatcctgttcctcctcc 49281
>gb|AC122372.4| Mus musculus BAC clone RP23-463P4 from chromosome 10, complete sequence Length = 183391 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aactctctcctcttgtcact 398 |||||||||||||||||||| Sbjct: 138909 aactctctcctcttgtcact 138928
>gb|AC122411.4| Mus musculus BAC clone RP24-143P19 from chromosome 1, complete sequence Length = 182658 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cttctcctcccccttcttcc 26 |||||||||||||||||||| Sbjct: 179542 cttctcctcccccttcttcc 179561
>gb|AC121987.2| Mus musculus BAC clone RP24-294E6 from 9, complete sequence Length = 176642 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tccccttgtttgtccccttc 327 |||||||||||||||||||| Sbjct: 136976 tccccttgtttgtccccttc 136957
>gb|AC004009.1| Homo sapiens PAC clone RP5-1103I5 from 7, complete sequence Length = 80765 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tctcttgcccccatcctgtt 417 |||||||||||||||||||| Sbjct: 23330 tctcttgcccccatcctgtt 23349
>gb|AC107783.10| Mus musculus chromosome 1, clone RP23-38G5, complete sequence Length = 178062 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttcttcccc 28 |||||||||| ||||||||||||| Sbjct: 90690 ttcttctccttccccttcttcccc 90713
>gb|AC162940.4| Mus musculus BAC clone RP23-95D3 from chromosome 13, complete sequence Length = 218228 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 203465 ctcctcccccttcttccccc 203446
>gb|AC146142.1| Pan troglodytes BAC clone RP43-23M11 from 7, complete sequence Length = 173557 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 agccagctcttgaattcttg 175 |||||||||||||||||||| Sbjct: 31830 agccagctcttgaattcttg 31849
>emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on chromosome 1 Contains the 3' end of the gene for a novel protein, a novel pseudogene, the SFPQ gene for splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), the 5' end of the ZNF262 gene for zinc finger protein 262 and a CpG island, complete sequence Length = 185909 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 147233 ccttcttctcctcctccttcttcc 147256
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 132174 cttcttctcctcccccttct 132193
>emb|X63198.1|GMHSP22L G.max hsp22 gene for low MW heat shock protein Length = 3012 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 2061 ccttcttctcctcctccttcttcc 2038
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggccgtcttcttccagcttg 95 |||||||||||||||||||| Sbjct: 28662 ggccgtcttcttccagcttg 28681
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggccgtcttcttccagcttg 95 |||||||||||||||||||| Sbjct: 285338 ggccgtcttcttccagcttg 285357
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggccgtcttcttccagcttg 95 |||||||||||||||||||| Sbjct: 218965 ggccgtcttcttccagcttg 218984
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccccc 30 |||||| |||||||||||||| |||||| Sbjct: 78155 ccttctcctcctcccccttctccccccc 78182
>emb|BX537261.7| Zebrafish DNA sequence from clone DKEY-73F6 in linkage group 14, complete sequence Length = 135268 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ttattccctgagctgctgcc 365 |||||||||||||||||||| Sbjct: 126403 ttattccctgagctgctgcc 126422
>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains part of the gene for a novel protein (likely ortholog to homo sapiens FLJ38335), complete sequence Length = 198148 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttcttccc 27 ||||||||||||| |||||||||| Sbjct: 177380 cttcttctcctcctccttcttccc 177357
>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence Length = 231917 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 118595 cctcccccttcttcccccct 118576
>gb|AE005845.1| Caulobacter crescentus CB15 section 171 of 359 of the complete genome Length = 10865 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggcggccgtcttcttccagc 92 |||||||||||||||||||| Sbjct: 9120 ggcggccgtcttcttccagc 9101
>dbj|AK094964.1| Homo sapiens cDNA FLJ37645 fis, clone BRHIP2000245 Length = 2537 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 214 ctcctcccccttcttccccc 233
>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete sequence Length = 223005 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcccccc 30 |||||| |||||||||||||| |||||| Sbjct: 4952 ccttctcctcctcccccttctccccccc 4925
>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence Length = 155629 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 115462 cttcttctcctcccccttct 115443
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 1287 ccttcttctcctcctccttcttcc 1264
>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown, complete sequence Length = 141309 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 ttgtttgtccccttcccctccttg 336 |||||||||||||||||| ||||| Sbjct: 84519 ttgtttgtccccttccccgccttg 84542
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 15511 ccttcttctcctcctccttcttcc 15488
>gb|AC093503.2| Homo sapiens chromosome 19 clone CTB-12A17, complete sequence Length = 147598 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 49351 ctcctcccccttcttccccc 49370
>gb|AC098863.3| Homo sapiens BAC clone RP11-347I16 from 4, complete sequence Length = 89261 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ttctcctcccccttcttcccccct 31 |||||||| ||||||||||||||| Sbjct: 78490 ttctcctctcccttcttcccccct 78513
>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete sequence Length = 188929 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 145729 cctcccccttcttcccccct 145710 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 145712 cctcccccttcttcccccct 145693 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 145695 cctcccccttcttcccccct 145676
>gb|AC160942.1| Pan troglodytes BAC clone CH251-443J9 from chromosome unknown, complete sequence Length = 182340 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tctcttgcccccatcctgtt 417 |||||||||||||||||||| Sbjct: 19786 tctcttgcccccatcctgtt 19805
>gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, complete sequence Length = 179495 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcctcccccttcttcccccc 30 |||||||||||||||||||| Sbjct: 78260 tcctcccccttcttcccccc 78279
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 91164 ccttcttctcctcctccttcttcc 91141 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 91115 ccttcttctcctcctccttcttcc 91092 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||||||||||| ||||||||| Sbjct: 90366 ccttcttctcctcctccttcttcc 90343
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 6348896 cttcttctcctcccccttct 6348915
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tccttgatacctgtgttatt 350 |||||||||||||||||||| Sbjct: 1480302 tccttgatacctgtgttatt 1480283
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 9239216 cttcttctcctcccccttct 9239197
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 12999434 cctcccccttcttcccccct 12999415
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 26122761 cctcccccttcttcccccct 26122780
>gb|AC098858.3| Homo sapiens BAC clone RP11-149A7 from 4, complete sequence Length = 172419 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttcttctcctcccccttctt 24 |||||||||||||||||||| Sbjct: 23879 ttcttctcctcccccttctt 23898
>gb|AC157527.2| Pan troglodytes BAC clone CH251-513D12 from chromosome unknown, complete sequence Length = 210196 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tctcttgcccccatcctgtt 417 |||||||||||||||||||| Sbjct: 159510 tctcttgcccccatcctgtt 159529
>gb|AC156024.2| Mus musculus BAC clone RP23-89J1 from chromosome 16, complete sequence Length = 240451 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ccttcttctcctcccccttcttcc 26 |||||| ||||||||||||||||| Sbjct: 1594 ccttctcctcctcccccttcttcc 1571
>gb|AC154797.2| Mus musculus BAC clone RP24-494B10 from chromosome 17, complete sequence Length = 140053 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ccccatcctgttcctcctcc 425 |||||||||||||||||||| Sbjct: 91641 ccccatcctgttcctcctcc 91660
>gb|AC146167.2| Pan troglodytes BAC clone RP43-1E11 from chromosome 7, complete sequence Length = 168862 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tctcttgcccccatcctgtt 417 |||||||||||||||||||| Sbjct: 118167 tctcttgcccccatcctgtt 118186
>gb|AC069214.14| Homo sapiens 12 BAC RP11-665J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94547 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 80340 cctcccccttcttcccccct 80359 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 80255 cctcccccttcttcccccct 80274
>gb|AC017071.9| Homo sapiens BAC clone RP11-410E4 from 2, complete sequence Length = 163456 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttcttctcctcccccttctt 24 |||||||||||||||||||| Sbjct: 121494 ttcttctcctcccccttctt 121475
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 28178 cctcccccttcttcccccct 28197
>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0038D11 Length = 156465 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 126336 cctcccccttcttcccccct 126355
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ctctctgaactctctcctct 391 |||||||||||||||||||| Sbjct: 148200 ctctctgaactctctcctct 148181
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 133238 cttcttctcctcccccttct 133219
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 6557 cttcttctcctcccccttct 6538
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tccttgatacctgtgttatt 350 |||||||||||||||||||| Sbjct: 98415 tccttgatacctgtgttatt 98396
>emb|BX510300.12| Mouse DNA sequence from clone RP23-221A16 on chromosome 4, complete sequence Length = 128614 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tctcctcccccttcttcccc 28 |||||||||||||||||||| Sbjct: 13750 tctcctcccccttcttcccc 13769
>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0018I03 Length = 145818 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tccttgatacctgtgttatt 350 |||||||||||||||||||| Sbjct: 8546 tccttgatacctgtgttatt 8527
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcccccttcttcccccct 31 |||||||||||||||||||| Sbjct: 109077 cctcccccttcttcccccct 109058
>emb|CT572999.10| Mouse DNA sequence from clone RP23-6C18 on chromosome 12, complete sequence Length = 176044 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 ctctcttgcccccatcctgttcctcctc 424 ||||| |||||||||||| ||||||||| Sbjct: 151691 ctctcctgcccccatcctcttcctcctc 151664
>emb|X52608.1|HSCAM3X3 H.sapiens CaMIII gene, exons 3-6 Length = 3799 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctcccccttcttccccc 29 |||||||||||||||||||| Sbjct: 1048 ctcctcccccttcttccccc 1067
>emb|CT025871.10| Mouse DNA sequence from clone RP24-324L15 on chromosome 17, complete sequence Length = 154761 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttcttcccccc 30 |||||| |||||||||||||| |||||| Sbjct: 116929 ccttctcctcctcccccttctccccccc 116956
>gb|AC007450.1| Homo sapiens 12 BAC RP11-434C1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 210779 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tagtgttgtacacttgtact 198 |||||||||||||||||||| Sbjct: 132371 tagtgttgtacacttgtact 132352
>emb|BX005250.7| Zebrafish DNA sequence from clone DKEY-35H6 in linkage group 14, complete sequence Length = 281427 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ttattccctgagctgctgcc 365 |||||||||||||||||||| Sbjct: 265796 ttattccctgagctgctgcc 265815
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cttcttctcctcccccttct 23 |||||||||||||||||||| Sbjct: 6415363 cttcttctcctcccccttct 6415382
>emb|AL845546.10| Mouse DNA sequence from clone RP23-138G9 on chromosome X, complete sequence Length = 87667 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tcttctcctcccccttcttccccc 29 |||||||||||||| ||||||||| Sbjct: 26881 tcttctcctcccccatcttccccc 26858
>emb|AJ550897.1|TRU550897 Takifugu rubripes ptr1 gene for parathyroid hormone receptor 1, exons 1-13 Length = 31774 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tccctgagctgctgcctgac 369 |||||||||||||||||||| Sbjct: 1105 tccctgagctgctgcctgac 1124
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cttctcctcccccttcttcc 26 |||||||||||||||||||| Sbjct: 21109 cttctcctcccccttcttcc 21128
>gb|AC058786.24| Mus musculus strain C57BL/6J chromosome 4 clone rp23-117o7, complete sequence Length = 209737 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cttctcctcccccttcttcc 26 |||||||||||||||||||| Sbjct: 32508 cttctcctcccccttcttcc 32489
>gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome 6, complete sequence Length = 209147 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccttcttctcctcccccttc 22 |||||||||||||||||||| Sbjct: 54033 ccttcttctcctcccccttc 54052
>emb|AL607030.15| Mouse DNA sequence from clone RP23-304O12 on chromosome 11, complete sequence Length = 189236 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tcttctcctcccccttcttccccc 29 ||||| |||||||||||||||||| Sbjct: 33365 tcttcccctcccccttcttccccc 33388
>emb|AL732547.8| Mouse DNA sequence from clone RP23-24E11 on chromosome 4, complete sequence Length = 206741 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cttctcctcccccttcttcc 26 |||||||||||||||||||| Sbjct: 80191 cttctcctcccccttcttcc 80210
>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete sequence Length = 194554 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cttctcctcccccttcttcc 26 |||||||||||||||||||| Sbjct: 73594 cttctcctcccccttcttcc 73613 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,747,908 Number of Sequences: 3902068 Number of extensions: 3747908 Number of successful extensions: 100627 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 99919 Number of HSP's gapped (non-prelim): 709 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)