ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAUB_YERPS (Q664P8) Taurine import ATP-binding protein tauB (EC ... 32 0.91
2TAUB_YERPE (Q8ZJD0) Taurine import ATP-binding protein tauB (EC ... 32 0.91

>TAUB_YERPS (Q664P8) Taurine import ATP-binding protein tauB (EC 3.6.3.36)|
          Length = 255

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -1

Query: 156 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 34
           G S+ QRR+TAL ++   GLA F    + + +GG  Q VGI
Sbjct: 99  GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139



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>TAUB_YERPE (Q8ZJD0) Taurine import ATP-binding protein tauB (EC 3.6.3.36)|
          Length = 255

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -1

Query: 156 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 34
           G S+ QRR+TAL ++   GLA F    + + +GG  Q VGI
Sbjct: 99  GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,613,643
Number of Sequences: 219361
Number of extensions: 933736
Number of successful extensions: 2559
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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