>dbj|AK103088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118I15, full
           insert sequence
          Length = 1518

 Score =  115 bits (58), Expect = 1e-22
 Identities = 142/170 (83%)
 Strand = Plus / Plus

                                                                       
Query: 121 gccggcgctggactggccggcctcgccgtcgctctgggactccacaggaagggcgttcgg 180
           |||||||| || || ||||| ||||| || || || ||||| |||||||| ||  |  ||
Sbjct: 113 gccggcgccggcctcgccgggctcgcagtggccctcggactgcacaggaaaggactgagg 172

                                                                       
Query: 181 agcgtggtgctggagtcgtcgccggaccgtcgcacgtccggcttcgccttcttcacatgg 240
           ||||||||||||||||||||||||   |  || |||||||| || || ||| ||||||||
Sbjct: 173 agcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacatgg 232

                                                             
Query: 241 accaacgccttccgcgcgcttgacgccctcggggtaggggacaagatgag 290
           || |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 233 acgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgag 282

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                           
Query: 179     ggagcgtggtgctggagtcgtcgccggaccgtcgcacgtccggcttcgccttcttcacat 238
               ||||||||||||||||||||||||||   |  || |||||||| || || ||| ||||||
Sbjct: 2943674 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 2943733

                                                                   
Query: 239     ggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagatgag 290
               |||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 2943734 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgag 2943785



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 235     acatggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagat 287
               |||||||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 2946754 acatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaagat 2946806



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 256     gcgcttgacgccctcggggtaggggacaagat 287
               |||||||||||||| |||||||| ||||||||
Sbjct: 2931586 gcgcttgacgcccttggggtaggcgacaagat 2931617



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 419      tgctgctccaggcgctggagga 440
                ||||||||||||||||||||||
Sbjct: 32478425 tgctgctccaggcgctggagga 32478404



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     ggtgctggagtcgtcgccgga 206
               |||||||||||||||||||||
Sbjct: 2940419 ggtgctggagtcgtcgccgga 2940439



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     ggtgctggagtcgtcgccgga 206
               |||||||||||||||||||||
Sbjct: 2916789 ggtgctggagtcgtcgccgga 2916809



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 256     gcgcttgacgccctcggggtaggggacaagat 287
               |||||||||||||| ||||| || ||||||||
Sbjct: 2916859 gcgcttgacgcccttggggtgggtgacaagat 2916890

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0016I15, complete sequence
          Length = 166282

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                         
Query: 179   ggagcgtggtgctggagtcgtcgccggaccgtcgcacgtccggcttcgccttcttcacat 238
             ||||||||||||||||||||||||||   |  || |||||||| || || ||| ||||||
Sbjct: 81161 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 81220

                                                                 
Query: 239   ggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagatgag 290
             |||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 81221 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgag 81272



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 235   acatggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagat 287
             |||||||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 84241 acatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaagat 84293



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 256   gcgcttgacgccctcggggtaggggacaagat 287
             |||||||||||||| |||||||| ||||||||
Sbjct: 69073 gcgcttgacgcccttggggtaggcgacaagat 69104



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   ggtgctggagtcgtcgccgga 206
             |||||||||||||||||||||
Sbjct: 77906 ggtgctggagtcgtcgccgga 77926



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   ggtgctggagtcgtcgccgga 206
             |||||||||||||||||||||
Sbjct: 54276 ggtgctggagtcgtcgccgga 54296



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 256   gcgcttgacgccctcggggtaggggacaagat 287
             |||||||||||||| ||||| || ||||||||
Sbjct: 54346 gcgcttgacgcccttggggtgggtgacaagat 54377

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                           
Query: 179     ggagcgtggtgctggagtcgtcgccggaccgtcgcacgtccggcttcgccttcttcacat 238
               ||||||||||||||||||||||||||   |  || |||||||| || || ||| ||||||
Sbjct: 2943785 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 2943844

                                                                   
Query: 239     ggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagatgag 290
               |||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 2943845 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgag 2943896



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 235     acatggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagat 287
               |||||||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 2946865 acatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaagat 2946917



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 256     gcgcttgacgccctcggggtaggggacaagat 287
               |||||||||||||| |||||||| ||||||||
Sbjct: 2931697 gcgcttgacgcccttggggtaggcgacaagat 2931728



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 419      tgctgctccaggcgctggagga 440
                ||||||||||||||||||||||
Sbjct: 32568935 tgctgctccaggcgctggagga 32568914



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     ggtgctggagtcgtcgccgga 206
               |||||||||||||||||||||
Sbjct: 2940530 ggtgctggagtcgtcgccgga 2940550



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     ggtgctggagtcgtcgccgga 206
               |||||||||||||||||||||
Sbjct: 2916900 ggtgctggagtcgtcgccgga 2916920



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 256     gcgcttgacgccctcggggtaggggacaagat 287
               |||||||||||||| ||||| || ||||||||
Sbjct: 2916970 gcgcttgacgcccttggggtgggtgacaagat 2917001

>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full
           insert sequence
          Length = 1661

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 235 acatggaccaacgccttccgcgcgcttgacgccctcggggtaggggacaagat 287
           |||||||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 250 acatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaagat 302

>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
              sequence
          Length = 145507

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 419    tgctgctccaggcgctggagga 440
              ||||||||||||||||||||||
Sbjct: 130553 tgctgctccaggcgctggagga 130532

>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete
             sequence
          Length = 119134

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 419   tgctgctccaggcgctggagga 440
             ||||||||||||||||||||||
Sbjct: 11874 tgctgctccaggcgctggagga 11853

>dbj|AK073842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067C09, full
           insert sequence
          Length = 1820

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 419 tgctgctccaggcgctggagga 440
           ||||||||||||||||||||||
Sbjct: 354 tgctgctccaggcgctggagga 375

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 413     gtaacgtgctgctccaggcgctgga 437
               |||||||||||||||||||| ||||
Sbjct: 3309640 gtaacgtgctgctccaggcggtgga 3309616

>ref|XM_580001.1| PREDICTED: Rattus norvegicus LOC499665 (LOC499665), mRNA
          Length = 526

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 155 tgggactccacaggaagggcg 175
           |||||||||||||||||||||
Sbjct: 479 tgggactccacaggaagggcg 459

>gb|AF530054.1| Azospirillum brasilense Yu62 clpP-tig gene cluster
          Length = 6369

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  gctgctccaggcgctggagga 440
            |||||||||||||||||||||
Sbjct: 3242 gctgctccaggcgctggagga 3222

>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence
          Length = 198404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   atctgcagctgctggggttg 318
             ||||||||||||||||||||
Sbjct: 39075 atctgcagctgctggggttg 39094

>gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, complete sequence
          Length = 196451

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    atctgcagctgctggggttg 318
              ||||||||||||||||||||
Sbjct: 179553 atctgcagctgctggggttg 179572

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 419     tgctgctccaggcgctggaggatg 442
               |||||||||||||||||| |||||
Sbjct: 1047439 tgctgctccaggcgctggcggatg 1047416

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    tccaggcgctggaggatgag 444
              ||||||||||||||||||||
Sbjct: 374745 tccaggcgctggaggatgag 374726

>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete
              sequence
          Length = 208384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    gtcgctctgggactccacag 167
              ||||||||||||||||||||
Sbjct: 162423 gtcgctctgggactccacag 162442

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 420    gctgctccaggcgctggaggatgagctg 447
              ||||| ||||||||||| ||||||||||
Sbjct: 184360 gctgcgccaggcgctggcggatgagctg 184333

>dbj|AP003155.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-567F3, complete
             sequences
          Length = 157385

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   gtcgctctgggactccacag 167
             ||||||||||||||||||||
Sbjct: 89189 gtcgctctgggactccacag 89170

>gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, complete sequence
          Length = 161505

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gacatctgcagctgctgggg 315
              ||||||||||||||||||||
Sbjct: 105634 gacatctgcagctgctgggg 105615

>emb|AL805960.10| Mouse DNA sequence from clone RP23-20P17 on chromosome X, complete
             sequence
          Length = 172780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 151   gctctgggactccacaggaagggcgttc 178
             |||||||||||||| |||||||| ||||
Sbjct: 25897 gctctgggactccagaggaagggggttc 25924


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,900,890
Number of Sequences: 3902068
Number of extensions: 2900890
Number of successful extensions: 61081
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60689
Number of HSP's gapped (non-prelim): 388
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)