ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARGI1_ARATH (P46637) Arginase (EC 3.5.3.1) 141 6e-34
2ARGI2_ARATH (Q9ZPF5) Probable arginase (EC 3.5.3.1) 130 1e-30
3ARGI_SOYBN (O49046) Arginase (EC 3.5.3.1) 119 3e-27
4CT151_HUMAN (Q8NC74) Protein C20orf151 31 1.1
5NIFU_AZOCH (P23121) Nitrogen fixation protein nifU 31 1.4
6CCD71_HUMAN (Q8IV32) Coiled-coil domain-containing protein 71 30 1.8
7RL24_KLULA (P38665) 60S ribosomal protein L24 (Ribosomal protein... 30 2.4
8RL24_ASHGO (Q752U6) 60S ribosomal protein L24 30 2.4
9GATA_BACCR (Q81IN3) Glutamyl-tRNA(Gln) amidotransferase subunit ... 30 3.1
10GATA_BACAN (Q81ZE8) Glutamyl-tRNA(Gln) amidotransferase subunit ... 30 3.1
11IBP2_MOUSE (P47877) Insulin-like growth factor-binding protein 2... 29 4.0
12RL24_CANGA (Q6FXY9) 60S ribosomal protein L24 29 5.3
13PDFR_DROME (Q9W4Y2) PDF receptor (Protein groom-of-PDF) 29 5.3
14HUTG_BACSU (P42068) Formimidoylglutamase (EC 3.5.3.8) (Formimino... 28 6.9
15IBP2_RAT (P12843) Insulin-like growth factor-binding protein 2 p... 28 6.9
16SPEB_BACHD (Q9K6B9) Agmatinase (EC 3.5.3.11) (Agmatine ureohydro... 28 6.9
17CN139_HUMAN (Q9H761) Protein C14orf139 28 9.0
18SPEB_BACSU (P70999) Agmatinase (EC 3.5.3.11) (Agmatine ureohydro... 28 9.0
19Y747_TREPA (O83729) Hypothetical protein TP0747 28 9.0

>ARGI1_ARATH (P46637) Arginase (EC 3.5.3.1)|
          Length = 342

 Score =  141 bits (356), Expect = 6e-34
 Identities = 70/92 (76%), Positives = 82/92 (89%), Gaps = 3/92 (3%)
 Frame = +3

Query: 159 WIQRLSAAR---ISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLLGVP 329
           +I RL++A    +S  ++E+GQ+RVIDASLTLIRERAKLKGEL+R +GG KAS +LLGVP
Sbjct: 12  YIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGGAKASTSLLGVP 71

Query: 330 LGHNSSFLQGPAFAPPRIREAIWCGSTNSSTE 425
           LGHNSSFLQGPAFAPPRIREAIWCGSTNS+TE
Sbjct: 72  LGHNSSFLQGPAFAPPRIREAIWCGSTNSATE 103



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>ARGI2_ARATH (Q9ZPF5) Probable arginase (EC 3.5.3.1)|
          Length = 344

 Score =  130 bits (327), Expect = 1e-30
 Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 6/95 (6%)
 Frame = +3

Query: 159 WIQRLSAA------RISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLL 320
           + QRL AA       + T  +E GQ+RVIDASLTLIRERAKLKGEL+R +GG KA+  LL
Sbjct: 11  YFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKGELVRLIGGAKATTALL 70

Query: 321 GVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSSTE 425
           GVPLGHNSSFL+GPA APP +REAIWCGSTNS+TE
Sbjct: 71  GVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTE 105



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>ARGI_SOYBN (O49046) Arginase (EC 3.5.3.1)|
          Length = 350

 Score =  119 bits (298), Expect = 3e-27
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +3

Query: 162 IQRLSAARISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLLGVPLGHN 341
           +Q+L A +IS ++LE+ Q+RVIDA+LTL+RE   L+  L  ++GG  A++TLLGVPLGHN
Sbjct: 24  MQKLCAEKISPDSLEKAQNRVIDAALTLVRENTGLRKNLCHSLGGAVATSTLLGVPLGHN 83

Query: 342 SSFLQGPAFAPPRIREAIWCGSTNSSTE 425
           SSFL+GPAFAPP IRE IWCGS NS+TE
Sbjct: 84  SSFLEGPAFAPPFIREGIWCGSANSTTE 111



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>CT151_HUMAN (Q8NC74) Protein C20orf151|
          Length = 664

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = -2

Query: 400 HQMASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASMT 221
           H   +++R G+ A  C  D     GTP  +    +PP       LSL       R ++MT
Sbjct: 219 HGTIAVVRPGSQA--CPADRGPANGTPPPLPARSSPPSPAYERGLSLDSFLRASRPSAMT 276

Query: 220 RLWPRSSASVEILAALSRWIHL 155
              P+ S  V+ L  L+R + L
Sbjct: 277 HEAPKLSPKVDRLCLLNRPLSL 298



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>NIFU_AZOCH (P23121) Nitrogen fixation protein nifU|
          Length = 309

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 337 CPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASMTRLWPRSSASVEILAALSR 167
           C  G  + ++E L P +ARS+S     +  ++V   S  R WPR   +   L+ L R
Sbjct: 175 CHEGIERVLSEELAP-VARSSSCADQGQEEVKVLAPSRLRSWPRRLRATPKLSNLQR 230



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>CCD71_HUMAN (Q8IV32) Coiled-coil domain-containing protein 71|
          Length = 467

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -2

Query: 331 RGTPKSVAEALTPPIARSNSPLSLARSRMRVREA------SMTRLWPRS 203
           RG PK  A+A T    + N P ++ + R R  EA        TRL PRS
Sbjct: 363 RGRPKGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRS 411



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>RL24_KLULA (P38665) 60S ribosomal protein L24 (Ribosomal protein L30)|
          Length = 155

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +3

Query: 180 ARISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311
           AR  T    + Q  V+ ASL LI+ER  LK E+ +A    K  A
Sbjct: 68  ARKRTRKSVKAQRAVVGASLELIKERRSLKPEVRKAQRDEKKKA 111



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>RL24_ASHGO (Q752U6) 60S ribosomal protein L24|
          Length = 155

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 207 RGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311
           + Q  V+ ASL LI+ER  LK E+ +A    KA A
Sbjct: 77  KAQRAVVGASLELIKERRSLKPEIRKAKRDEKAKA 111



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>GATA_BACCR (Q81IN3) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 485

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +3

Query: 165 QRLSAARIS-TEALERGQSRVID------ASLTLIRERAKLKGELLRAMGGVKASATLLG 323
           ++L+   IS T+ +E    R+ D      A LTL  E A+ K + L A  G + +  L G
Sbjct: 13  KKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFG 72

Query: 324 VPLG 335
           +P+G
Sbjct: 73  MPIG 76



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>GATA_BACAN (Q81ZE8) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 485

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +3

Query: 165 QRLSAARIS-TEALERGQSRVID------ASLTLIRERAKLKGELLRAMGGVKASATLLG 323
           ++L+   IS T+ +E    R+ D      A LTL  E A+ K + L A  G + +  L G
Sbjct: 13  KKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFG 72

Query: 324 VPLG 335
           +P+G
Sbjct: 73  MPIG 76



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>IBP2_MOUSE (P47877) Insulin-like growth factor-binding protein 2 precursor|
           (IGFBP-2) (IBP-2) (IGF-binding protein 2)
          Length = 305

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -2

Query: 418 LELVLPHQMASLMRGGANAGPCKKDEL---CPRGTPKSVAEALTPPIA 284
           L L+LP  +  L+ G    GP  + E+   CP  TP+++A    PP A
Sbjct: 10  LPLLLPSLLLLLLLGAGGCGPGVRAEVLFRCPPCTPEALAACGPPPDA 57



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>RL24_CANGA (Q6FXY9) 60S ribosomal protein L24|
          Length = 155

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 207 RGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311
           + Q  ++ ASL LI+ER  LK E+ +A    KA A
Sbjct: 77  KAQRAIVGASLELIKERRSLKPEVRKAKRDDKAKA 111



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>PDFR_DROME (Q9W4Y2) PDF receptor (Protein groom-of-PDF)|
          Length = 669

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -2

Query: 391 ASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASM-TRL 215
           AS+  G  N  P   D + P G P +  + ++PP  R N     + S + + E     RL
Sbjct: 530 ASMYSGAYNTAP-DTDAVQPAGDPSATGKRISPPNKRLNGRKPSSASIVMIHEPQQRQRL 588

Query: 214 WPR 206
            PR
Sbjct: 589 MPR 591



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>HUTG_BACSU (P42068) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)|
           (Formiminoglutamate hydrolase)
          Length = 319

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 315 LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSS 419
           L+GVPL  +S    G +FAP  IR+A+   S  S+
Sbjct: 39  LIGVPLSKSSISHSGASFAPGTIRQALKHSSAYSA 73



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>IBP2_RAT (P12843) Insulin-like growth factor-binding protein 2 precursor|
           (IGFBP-2) (IBP-2) (IGF-binding protein 2) (BRL-BP)
          Length = 304

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -2

Query: 418 LELVLPHQMASLMRGGANAGPCKKDEL---CPRGTPKSVAEALTPPIA 284
           L L+LP  +  L+ G    GP  + E+   CP  TP+ +A    PP A
Sbjct: 10  LPLLLPSLLLLLLLGAGGCGPGVRAEVLFRCPPCTPERLAACGPPPDA 57



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>SPEB_BACHD (Q9K6B9) Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)|
          Length = 289

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 300 KASATLLGVPLGHNSSFLQGPAFAPPRIREA 392
           K+ A + G+P+    SF     F P RIREA
Sbjct: 21  KSKAVIFGMPMDWTVSFRPSSRFGPNRIREA 51



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>CN139_HUMAN (Q9H761) Protein C14orf139|
          Length = 190

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 287 YGWCQSFCDTLGSTPWAQLIFLAGA 361
           + W ++ C TL + PWA + FL+ A
Sbjct: 154 HDWLRAQCSTLWNVPWASVAFLSFA 178



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>SPEB_BACSU (P70999) Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)|
          Length = 290

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 300 KASATLLGVPLGHNSSFLQGPAFAPPRIRE 389
           +A A L G+P+    S+  G  F P RIRE
Sbjct: 21  EADAILYGMPMDWTVSYRPGSRFGPSRIRE 50



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>Y747_TREPA (O83729) Hypothetical protein TP0747|
          Length = 344

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 397 QMASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLAR 254
           ++ S  + GA+A    +   C R + +SV+    PP   S  P+ +++
Sbjct: 193 RVRSAKKSGADAARASEGATCDRASSESVSPTARPPAQASAGPIRMSQ 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,200,541
Number of Sequences: 219361
Number of extensions: 868725
Number of successful extensions: 3495
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3494
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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