| Clone Name | bast46b09 |
|---|---|
| Clone Library Name | barley_pub |
>ARGI1_ARATH (P46637) Arginase (EC 3.5.3.1)| Length = 342 Score = 141 bits (356), Expect = 6e-34 Identities = 70/92 (76%), Positives = 82/92 (89%), Gaps = 3/92 (3%) Frame = +3 Query: 159 WIQRLSAAR---ISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLLGVP 329 +I RL++A +S ++E+GQ+RVIDASLTLIRERAKLKGEL+R +GG KAS +LLGVP Sbjct: 12 YIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGGAKASTSLLGVP 71 Query: 330 LGHNSSFLQGPAFAPPRIREAIWCGSTNSSTE 425 LGHNSSFLQGPAFAPPRIREAIWCGSTNS+TE Sbjct: 72 LGHNSSFLQGPAFAPPRIREAIWCGSTNSATE 103
>ARGI2_ARATH (Q9ZPF5) Probable arginase (EC 3.5.3.1)| Length = 344 Score = 130 bits (327), Expect = 1e-30 Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 6/95 (6%) Frame = +3 Query: 159 WIQRLSAA------RISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLL 320 + QRL AA + T +E GQ+RVIDASLTLIRERAKLKGEL+R +GG KA+ LL Sbjct: 11 YFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKGELVRLIGGAKATTALL 70 Query: 321 GVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSSTE 425 GVPLGHNSSFL+GPA APP +REAIWCGSTNS+TE Sbjct: 71 GVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTE 105
>ARGI_SOYBN (O49046) Arginase (EC 3.5.3.1)| Length = 350 Score = 119 bits (298), Expect = 3e-27 Identities = 56/88 (63%), Positives = 72/88 (81%) Frame = +3 Query: 162 IQRLSAARISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASATLLGVPLGHN 341 +Q+L A +IS ++LE+ Q+RVIDA+LTL+RE L+ L ++GG A++TLLGVPLGHN Sbjct: 24 MQKLCAEKISPDSLEKAQNRVIDAALTLVRENTGLRKNLCHSLGGAVATSTLLGVPLGHN 83 Query: 342 SSFLQGPAFAPPRIREAIWCGSTNSSTE 425 SSFL+GPAFAPP IRE IWCGS NS+TE Sbjct: 84 SSFLEGPAFAPPFIREGIWCGSANSTTE 111
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = -2 Query: 400 HQMASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASMT 221 H +++R G+ A C D GTP + +PP LSL R ++MT Sbjct: 219 HGTIAVVRPGSQA--CPADRGPANGTPPPLPARSSPPSPAYERGLSLDSFLRASRPSAMT 276 Query: 220 RLWPRSSASVEILAALSRWIHL 155 P+ S V+ L L+R + L Sbjct: 277 HEAPKLSPKVDRLCLLNRPLSL 298
>NIFU_AZOCH (P23121) Nitrogen fixation protein nifU| Length = 309 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -2 Query: 337 CPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASMTRLWPRSSASVEILAALSR 167 C G + ++E L P +ARS+S + ++V S R WPR + L+ L R Sbjct: 175 CHEGIERVLSEELAP-VARSSSCADQGQEEVKVLAPSRLRSWPRRLRATPKLSNLQR 230
>CCD71_HUMAN (Q8IV32) Coiled-coil domain-containing protein 71| Length = 467 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = -2 Query: 331 RGTPKSVAEALTPPIARSNSPLSLARSRMRVREA------SMTRLWPRS 203 RG PK A+A T + N P ++ + R R EA TRL PRS Sbjct: 363 RGRPKGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRS 411
>RL24_KLULA (P38665) 60S ribosomal protein L24 (Ribosomal protein L30)| Length = 155 Score = 30.0 bits (66), Expect = 2.4 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 180 ARISTEALERGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311 AR T + Q V+ ASL LI+ER LK E+ +A K A Sbjct: 68 ARKRTRKSVKAQRAVVGASLELIKERRSLKPEVRKAQRDEKKKA 111
>RL24_ASHGO (Q752U6) 60S ribosomal protein L24| Length = 155 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 Query: 207 RGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311 + Q V+ ASL LI+ER LK E+ +A KA A Sbjct: 77 KAQRAVVGASLELIKERRSLKPEIRKAKRDEKAKA 111
>GATA_BACCR (Q81IN3) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 485 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Frame = +3 Query: 165 QRLSAARIS-TEALERGQSRVID------ASLTLIRERAKLKGELLRAMGGVKASATLLG 323 ++L+ IS T+ +E R+ D A LTL E A+ K + L A G + + L G Sbjct: 13 KKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFG 72 Query: 324 VPLG 335 +P+G Sbjct: 73 MPIG 76
>GATA_BACAN (Q81ZE8) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 485 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Frame = +3 Query: 165 QRLSAARIS-TEALERGQSRVID------ASLTLIRERAKLKGELLRAMGGVKASATLLG 323 ++L+ IS T+ +E R+ D A LTL E A+ K + L A G + + L G Sbjct: 13 KKLNNKEISVTDLVEESYKRIADVEDNVKAFLTLDEENARAKAKELDAKIGAEDNGLLFG 72 Query: 324 VPLG 335 +P+G Sbjct: 73 MPIG 76
>IBP2_MOUSE (P47877) Insulin-like growth factor-binding protein 2 precursor| (IGFBP-2) (IBP-2) (IGF-binding protein 2) Length = 305 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = -2 Query: 418 LELVLPHQMASLMRGGANAGPCKKDEL---CPRGTPKSVAEALTPPIA 284 L L+LP + L+ G GP + E+ CP TP+++A PP A Sbjct: 10 LPLLLPSLLLLLLLGAGGCGPGVRAEVLFRCPPCTPEALAACGPPPDA 57
>RL24_CANGA (Q6FXY9) 60S ribosomal protein L24| Length = 155 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 207 RGQSRVIDASLTLIRERAKLKGELLRAMGGVKASA 311 + Q ++ ASL LI+ER LK E+ +A KA A Sbjct: 77 KAQRAIVGASLELIKERRSLKPEVRKAKRDDKAKA 111
>PDFR_DROME (Q9W4Y2) PDF receptor (Protein groom-of-PDF)| Length = 669 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = -2 Query: 391 ASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLARSRMRVREASM-TRL 215 AS+ G N P D + P G P + + ++PP R N + S + + E RL Sbjct: 530 ASMYSGAYNTAP-DTDAVQPAGDPSATGKRISPPNKRLNGRKPSSASIVMIHEPQQRQRL 588 Query: 214 WPR 206 PR Sbjct: 589 MPR 591
>HUTG_BACSU (P42068) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 319 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 315 LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSS 419 L+GVPL +S G +FAP IR+A+ S S+ Sbjct: 39 LIGVPLSKSSISHSGASFAPGTIRQALKHSSAYSA 73
>IBP2_RAT (P12843) Insulin-like growth factor-binding protein 2 precursor| (IGFBP-2) (IBP-2) (IGF-binding protein 2) (BRL-BP) Length = 304 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 418 LELVLPHQMASLMRGGANAGPCKKDEL---CPRGTPKSVAEALTPPIA 284 L L+LP + L+ G GP + E+ CP TP+ +A PP A Sbjct: 10 LPLLLPSLLLLLLLGAGGCGPGVRAEVLFRCPPCTPERLAACGPPPDA 57
>SPEB_BACHD (Q9K6B9) Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)| Length = 289 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 300 KASATLLGVPLGHNSSFLQGPAFAPPRIREA 392 K+ A + G+P+ SF F P RIREA Sbjct: 21 KSKAVIFGMPMDWTVSFRPSSRFGPNRIREA 51
>CN139_HUMAN (Q9H761) Protein C14orf139| Length = 190 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +2 Query: 287 YGWCQSFCDTLGSTPWAQLIFLAGA 361 + W ++ C TL + PWA + FL+ A Sbjct: 154 HDWLRAQCSTLWNVPWASVAFLSFA 178
>SPEB_BACSU (P70999) Agmatinase (EC 3.5.3.11) (Agmatine ureohydrolase) (AUH)| Length = 290 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 300 KASATLLGVPLGHNSSFLQGPAFAPPRIRE 389 +A A L G+P+ S+ G F P RIRE Sbjct: 21 EADAILYGMPMDWTVSYRPGSRFGPSRIRE 50
>Y747_TREPA (O83729) Hypothetical protein TP0747| Length = 344 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = -2 Query: 397 QMASLMRGGANAGPCKKDELCPRGTPKSVAEALTPPIARSNSPLSLAR 254 ++ S + GA+A + C R + +SV+ PP S P+ +++ Sbjct: 193 RVRSAKKSGADAARASEGATCDRASSESVSPTARPPAQASAGPIRMSQ 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,200,541 Number of Sequences: 219361 Number of extensions: 868725 Number of successful extensions: 3495 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3494 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)