ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
3emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471... 54 4e-04
4ref|NM_193864.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
5gb|AF465469.1| Lolium perenne laccase LAC2-1 mRNA, complete cds 50 0.007
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
7dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
8emb|AM086215.1| Zea mays mRNA for putative laccase (lac3 gene) 50 0.007
9ref|XM_476345.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
10gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
11dbj|AB108306.1| Phleum pratense DNA, SSR, microsatellite B02-A08 48 0.026
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
14dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
15dbj|AK103094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
17ref|NM_195906.1| Oryza sativa (japonica cultivar-group) putative... 46 0.10
18ref|XM_463491.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
19gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nippon... 46 0.10
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
21dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
22dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
23dbj|AK109431.2| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
24dbj|AK110474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
25dbj|AK065154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
26dbj|AK061816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
28ref|NM_190623.1| Oryza sativa (japonica cultivar-group), predic... 44 0.40
29ref|NM_190416.1| Oryza sativa (japonica cultivar-group), predic... 44 0.40
30gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosom... 44 0.40
31gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds 44 0.40
32gb|AF465466.1| Lolium perenne laccase LAC6-2 mRNA, partial cds 44 0.40
33gb|AY897209.1| Zea mays laccase 1 (LAC1) gene, complete cds 44 0.40
34gb|AY897208.1| Zea mays laccase 1 (LAC1) mRNA, complete cds 44 0.40
35dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
36dbj|AK105333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
37dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
38dbj|AK066963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
39gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, compl... 44 0.40
40ref|NM_196671.1| Oryza sativa (japonica cultivar-group) putative... 42 1.6
41emb|AL583925.1|MLEPRTN9 Mycobacterium leprae strain TN complete ... 42 1.6
42gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 42 1.6
43emb|X58891.1|MLRRNOPR M.leprae DNA for ribosomal RNA operon regu... 42 1.6
44ref|NM_190569.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
45ref|NM_190556.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
46ref|NM_192960.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
47gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
48gb|AF465468.1| Lolium perenne laccase LAC5-6 mRNA, complete cds 40 6.3
49gb|DQ135971.1| Triticum aestivum clone wmc(5b1.2) anchored-SSR p... 40 6.3
50gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygro... 40 6.3
51gb|AF132126.1|AF132126 Pinus taeda laccase (Lac8) mRNA, complete... 40 6.3
52dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
53gb|AC079921.5| Homo sapiens BAC clone RP11-360F5 from 4, complet... 40 6.3
54dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
55dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
56dbj|AK066513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
57dbj|AK068047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
58emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.3
59emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.3
60emb|AM086217.1| Zea mays mRNA for putative laccase (lac5 gene) 40 6.3
61emb|AM086216.1| Zea mays mRNA for putative laccase (lac4 gene) 40 6.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 5       acgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 47
               |||||| ||| ||||| |||||||||||||||||||| |||||
Sbjct: 9073932 acgtcgacgggcaggagggcacgctgtggtggcacgcccacgt 9073974



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 16      caggaaggcacgctgtggtggcac 39
               ||||| ||||||||||||||||||
Sbjct: 8960785 caggagggcacgctgtggtggcac 8960808



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 235     accatcaatggaaagcctggagatctgtacaactgc 270
               ||||||||||| ||||| || || ||||||||||||
Sbjct: 8870470 accatcaatggcaagccgggcgacctgtacaactgc 8870505
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 5       acgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 47
               |||||| ||| ||||| |||||||||||||||||||| |||||
Sbjct: 9073817 acgtcgacgggcaggagggcacgctgtggtggcacgcccacgt 9073859



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 16      caggaaggcacgctgtggtggcac 39
               ||||| ||||||||||||||||||
Sbjct: 8960668 caggagggcacgctgtggtggcac 8960691



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 235     accatcaatggaaagcctggagatctgtacaactgc 270
               ||||||||||| ||||| || || ||||||||||||
Sbjct: 8870353 accatcaatggcaagccgggcgacctgtacaactgc 8870388
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>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103007

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 5     acgtcgtcggccaggaaggcacgctgtggtggcacgctcacgt 47
             |||||| ||| ||||| |||||||||||||||||||| |||||
Sbjct: 44161 acgtcgacgggcaggagggcacgctgtggtggcacgcccacgt 44119
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>ref|NM_193864.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 17  aggaaggcacgctgtggtggcacgctcac 45
           ||||||||||||| |||||||||||||||
Sbjct: 374 aggaaggcacgctatggtggcacgctcac 402
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>gb|AF465469.1| Lolium perenne laccase LAC2-1 mRNA, complete cds
          Length = 2056

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 1   ttcgacgtcgtcggccaggaaggcacgctgtggtggcacgc 41
           |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 357 ttcgacgtggtcgggcaggagggcaccctgtggtggcacgc 397
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 17       aggaaggcacgctgtggtggcacgctcac 45
                ||||||||||||| |||||||||||||||
Sbjct: 15428019 aggaaggcacgctatggtggcacgctcac 15428047



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 19       gaaggcacgctgtggtggcacgc 41
                |||||||||||||||||||||||
Sbjct: 36619004 gaaggcacgctgtggtggcacgc 36619026



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 12       cggccaggaaggcacgctgtggtggcacgc 41
                ||||||||| || |||||||||||||||||
Sbjct: 36628329 cggccaggaggggacgctgtggtggcacgc 36628358



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 235      accatcaatggaaagcctggagatctgtacaactgctc 272
                |||||||| ||  ||||||| |||||||||||||||||
Sbjct: 35397127 accatcaacggtcagcctggtgatctgtacaactgctc 35397164



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 16       caggaaggcacgctgtggtggcacgc 41
                ||||| ||||||||||||||||||||
Sbjct: 35396803 caggagggcacgctgtggtggcacgc 35396828



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 22       ggcacgctgtggtggcacgc 41
                ||||||||||||||||||||
Sbjct: 36230706 ggcacgctgtggtggcacgc 36230725



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       ggcacgctgtggtggcacgc 41
                ||||||||||||||||||||
Sbjct: 36172664 ggcacgctgtggtggcacgc 36172645



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       ggcacgctgtggtggcacgc 41
                ||||||||||||||||||||
Sbjct: 25436720 ggcacgctgtggtggcacgc 25436701
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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 17     aggaaggcacgctgtggtggcacgctcac 45
              ||||||||||||| |||||||||||||||
Sbjct: 105560 aggaaggcacgctatggtggcacgctcac 105588
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>emb|AM086215.1| Zea mays mRNA for putative laccase (lac3 gene)
          Length = 2310

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 17  aggaaggcacgctgtggtggcacgc 41
           |||||||||||||||||||||||||
Sbjct: 611 aggaaggcacgctgtggtggcacgc 635
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>ref|XM_476345.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1752

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 16  caggaaggcacgctgtggtggcacgctcacgt 47
           ||||| |||||||||||||||||||| |||||
Sbjct: 388 caggagggcacgctgtggtggcacgcccacgt 419
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 12    cggccaggaaggcacgctgtggtggcacgctcacgt 47
             ||||||||  |||||||||||||||||||| |||||
Sbjct: 45337 cggccaggtcggcacgctgtggtggcacgcccacgt 45372



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 22    ggcacgctgtggtggcacgctcacgt 47
             |||||||||||||||||||| |||||
Sbjct: 54044 ggcacgctgtggtggcacgcccacgt 54069
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>dbj|AB108306.1| Phleum pratense DNA, SSR, microsatellite B02-A08
          Length = 516

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 5   acgtcgtcggccaggaaggcacgctgtggtggcacgctca 44
           ||||| |||| ||||| ||||||||||||||||| |||||
Sbjct: 227 acgtcatcggtcaggagggcacgctgtggtggcatgctca 188
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 12       cggccaggaaggcacgctgtggtggcacgctcacgt 47
                ||||||||  |||||||||||||||||||| |||||
Sbjct: 24568435 cggccaggtcggcacgctgtggtggcacgcccacgt 24568470



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 22       ggcacgctgtggtggcacgctcacgt 47
                |||||||||||||||||||| |||||
Sbjct: 24577142 ggcacgctgtggtggcacgcccacgt 24577167



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 17       aggaaggcacgctgtggtggcacgc 41
                |||| ||||||||||||||||||||
Sbjct: 27886571 aggagggcacgctgtggtggcacgc 27886547
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 16    caggaaggcacgctgtggtggcacgctcacgt 47
             ||||| |||||||||||||||||||| |||||
Sbjct: 59184 caggagggcacgctgtggtggcacgcccacgt 59153
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 16    caggaaggcacgctgtggtggcacgctcacgt 47
             ||||| |||||||||||||||||||| |||||
Sbjct: 58483 caggagggcacgctgtggtggcacgcccacgt 58452
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>dbj|AK103094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118K21, full
           insert sequence
          Length = 2065

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 12  cggccaggaaggcacgctgtggtggcacgctcacgt 47
           ||||||||  |||||||||||||||||||| |||||
Sbjct: 449 cggccaggtcggcacgctgtggtggcacgcccacgt 484
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 12       cggccaggaaggcacgctgtggtggcacgctcacgt 47
                ||||||||  |||||||||||||||||||| |||||
Sbjct: 24880105 cggccaggtcggcacgctgtggtggcacgcccacgt 24880140



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 22       ggcacgctgtggtggcacgctcacgt 47
                |||||||||||||||||||| |||||
Sbjct: 24888812 ggcacgctgtggtggcacgcccacgt 24888837



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 17       aggaaggcacgctgtggtggcacgc 41
                |||| ||||||||||||||||||||
Sbjct: 27910559 aggagggcacgctgtggtggcacgc 27910535
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>ref|NM_195906.1| Oryza sativa (japonica cultivar-group) putative laccase
           (OSJNBa0045C13.15), mRNA
          Length = 1596

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 370 aagatcgccgggcacaagttcacggtggtagctgccgatgccaacta 416
           ||||||||||| |||| |||||||||||| ||  |||| ||||||||
Sbjct: 622 aagatcgccggccacaggttcacggtggtcgcctccgacgccaacta 668
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>ref|XM_463491.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1563

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 19  gaaggcacgctgtggtggcacgc 41
           |||||||||||||||||||||||
Sbjct: 256 gaaggcacgctgtggtggcacgc 278
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>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045C13, from Chromosome 10, complete sequence
          Length = 161250

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 370    aagatcgccgggcacaagttcacggtggtagctgccgatgccaacta 416
              ||||||||||| |||| |||||||||||| ||  |||| ||||||||
Sbjct: 110647 aagatcgccggccacaggttcacggtggtcgcctccgacgccaacta 110601



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 5      acgtcgtcggccaggaaggcacgctgtggtggcacgctcacg 46
              |||||| ||| |||||||| || |||||||||||||| ||||
Sbjct: 112055 acgtcgccgggcaggaaggtaccctgtggtggcacgcgcacg 112014
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 370     aagatcgccgggcacaagttcacggtggtagctgccgatgccaacta 416
               ||||||||||| |||| |||||||||||| ||  |||| ||||||||
Sbjct: 9878168 aagatcgccggccacaggttcacggtggtcgcctccgacgccaacta 9878122



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 5       acgtcgtcggccaggaaggcacgctgtggtggcacgctcacg 46
               |||||| ||| |||||||| || |||||||||||||| ||||
Sbjct: 9879576 acgtcgccgggcaggaaggtaccctgtggtggcacgcgcacg 9879535



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 17       aggaaggcacgctgtggtggcacgc 41
                |||| ||||||||||||||||||||
Sbjct: 15145488 aggagggcacgctgtggtggcacgc 15145512
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>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0414E03
          Length = 139598

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 19     gaaggcacgctgtggtggcacgc 41
              |||||||||||||||||||||||
Sbjct: 132379 gaaggcacgctgtggtggcacgc 132401
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>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529H11
          Length = 165969

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 19    gaaggcacgctgtggtggcacgc 41
             |||||||||||||||||||||||
Sbjct: 92270 gaaggcacgctgtggtggcacgc 92292



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 12     cggccaggaaggcacgctgtggtggcacgc 41
              ||||||||| || |||||||||||||||||
Sbjct: 101595 cggccaggaggggacgctgtggtggcacgc 101624
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>dbj|AK109431.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-A04, full
           insert sequence
          Length = 2032

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 19  gaaggcacgctgtggtggcacgc 41
           |||||||||||||||||||||||
Sbjct: 441 gaaggcacgctgtggtggcacgc 463
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>dbj|AK110474.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-H06, full
           insert sequence
          Length = 2290

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 370 aagatcgccgggcacaagttcacggtggtagctgccgatgccaacta 416
           ||||||||||| |||| |||||||||||| ||  |||| ||||||||
Sbjct: 811 aagatcgccggccacaggttcacggtggtcgcctccgacgccaacta 857



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 5   acgtcgtcggccaggaaggcacgctgtggtggcacgctcacg 46
           |||||| ||| |||||||| || |||||||||||||| ||||
Sbjct: 446 acgtcgccgggcaggaaggtaccctgtggtggcacgcgcacg 487
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>dbj|AK065154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B17, full
           insert sequence
          Length = 1996

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 19  gaaggcacgctgtggtggcacgc 41
           |||||||||||||||||||||||
Sbjct: 440 gaaggcacgctgtggtggcacgc 462
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>dbj|AK061816.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B06, full
           insert sequence
          Length = 1978

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 19  gaaggcacgctgtggtggcacgc 41
           |||||||||||||||||||||||
Sbjct: 445 gaaggcacgctgtggtggcacgc 467
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 370     aagatcgccgggcacaagttcacggtggtagctgccgatgccaacta 416
               ||||||||||| |||| |||||||||||| ||  |||| ||||||||
Sbjct: 9884207 aagatcgccggccacaggttcacggtggtcgcctccgacgccaacta 9884161



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 5       acgtcgtcggccaggaaggcacgctgtggtggcacgctcacg 46
               |||||| ||| |||||||| || |||||||||||||| ||||
Sbjct: 9885615 acgtcgccgggcaggaaggtaccctgtggtggcacgcgcacg 9885574



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 17       aggaaggcacgctgtggtggcacgc 41
                |||| ||||||||||||||||||||
Sbjct: 15153729 aggagggcacgctgtggtggcacgc 15153753
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>ref|NM_190623.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1665

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 12  cggccaggaaggcacgctgtggtggcacgc 41
           ||||||||| || |||||||||||||||||
Sbjct: 345 cggccaggaggggacgctgtggtggcacgc 374
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>ref|NM_190416.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1704

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 235 accatcaatggaaagcctggagatctgtacaactgctc 272
           |||||||| ||  ||||||| |||||||||||||||||
Sbjct: 577 accatcaacggtcagcctggtgatctgtacaactgctc 614



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  caggaaggcacgctgtggtggcacgc 41
           ||||| ||||||||||||||||||||
Sbjct: 358 caggagggcacgctgtggtggcacgc 383
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>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete
             sequence
          Length = 194018

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 16    caggaaggcacgctgtggtggcacgc 41
             ||||||||| ||||||||||||||||
Sbjct: 37772 caggaaggctcgctgtggtggcacgc 37747
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>gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds
          Length = 2156

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  caggaaggcacgctgtggtggcacgc 41
           ||||| ||||||||||||||||||||
Sbjct: 433 caggagggcacgctgtggtggcacgc 458
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>gb|AF465466.1| Lolium perenne laccase LAC6-2 mRNA, partial cds
          Length = 1005

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  caggaaggcacgctgtggtggcacgc 41
           ||||| ||||||||||||||||||||
Sbjct: 115 caggagggcacgctgtggtggcacgc 140
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>gb|AY897209.1| Zea mays laccase 1 (LAC1) gene, complete cds
          Length = 3771

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 16   caggaaggcacgctgtggtggcacgc 41
            ||||| ||||||||||||||||||||
Sbjct: 1638 caggagggcacgctgtggtggcacgc 1663
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>gb|AY897208.1| Zea mays laccase 1 (LAC1) mRNA, complete cds
          Length = 2289

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  caggaaggcacgctgtggtggcacgc 41
           ||||| ||||||||||||||||||||
Sbjct: 439 caggagggcacgctgtggtggcacgc 464
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 235   accatcaatggaaagcctggagatctgtacaactgctc 272
             |||||||| ||  ||||||| |||||||||||||||||
Sbjct: 21076 accatcaacggtcagcctggtgatctgtacaactgctc 21113



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 16    caggaaggcacgctgtggtggcacgc 41
             ||||| ||||||||||||||||||||
Sbjct: 20752 caggagggcacgctgtggtggcacgc 20777
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>dbj|AK105333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D07, full
           insert sequence
          Length = 1678

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 235 accatcaatggaaagcctggagatctgtacaactgctc 272
           |||||||| ||  ||||||| |||||||||||||||||
Sbjct: 344 accatcaacggtcagcctggtgatctgtacaactgctc 381
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>dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072C02, full
           insert sequence
          Length = 2023

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 235 accatcaatggaaagcctggagatctgtacaactgctc 272
           |||||||| ||  ||||||| |||||||||||||||||
Sbjct: 689 accatcaacggtcagcctggtgatctgtacaactgctc 726



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 16  caggaaggcacgctgtggtggcacgc 41
           ||||| ||||||||||||||||||||
Sbjct: 470 caggagggcacgctgtggtggcacgc 495
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>dbj|AK066963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093P21, full
           insert sequence
          Length = 2095

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 22  ggcacgctgtggtggcacgctcacgt 47
           |||||||||||||||||||| |||||
Sbjct: 432 ggcacgctgtggtggcacgcccacgt 457
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>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence
          Length = 174449

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 16   caggaaggcacgctgtggtggcacgc 41
            ||||||||| ||||||||||||||||
Sbjct: 6945 caggaaggctcgctgtggtggcacgc 6970
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>ref|NM_196671.1| Oryza sativa (japonica cultivar-group) putative diphenol oxidase
           (OSJNBb0040I11.7), mRNA
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 17  aggaaggcacgctgtggtggcacgc 41
           |||| ||||||||||||||||||||
Sbjct: 179 aggagggcacgctgtggtggcacgc 203
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>emb|AL583925.1|MLEPRTN9 Mycobacterium leprae strain TN complete genome; segment 9/10
          Length = 308950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 434 cagacgtcatcgcgattgcgccgggcgag 462
           |||||| ||| ||||||||||||||||||
Sbjct: 458 cagacgacattgcgattgcgccgggcgag 486
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    aggaaggcacgctgtggtggcacgc 41
             |||| ||||||||||||||||||||
Sbjct: 54101 aggagggcacgctgtggtggcacgc 54125
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>emb|X58891.1|MLRRNOPR M.leprae DNA for ribosomal RNA operon regulatory region
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 434 cagacgtcatcgcgattgcgccgggcgag 462
           |||||| ||| ||||||||||||||||||
Sbjct: 797 cagacgacattgcgattgcgccgggcgag 769
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>ref|NM_190569.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 397 ggcacgctgtggtggcacgc 416
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>ref|NM_190556.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 373 ggcacgctgtggtggcacgc 392
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>ref|NM_192960.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 370 ggcacgctgtggtggcacgc 389
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>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02,
             complete sequence
          Length = 131860

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ggcacgctgtggtggcacgc 41
             ||||||||||||||||||||
Sbjct: 90647 ggcacgctgtggtggcacgc 90666



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ggcacgctgtggtggcacgc 41
             ||||||||||||||||||||
Sbjct: 84576 ggcacgctgtggtggcacgc 84557
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>gb|AF465468.1| Lolium perenne laccase LAC5-6 mRNA, complete cds
          Length = 2036

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 436 ggcacgctgtggtggcacgc 455
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>gb|DQ135971.1| Triticum aestivum clone wmc(5b1.2) anchored-SSR primer sequence
          Length = 309

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 1   ttcgacgtcgtcggccaggaaggcacgctgtggtggcacgctca 44
           |||||||| | ||| |||| |||||| ||||||||||| |||||
Sbjct: 232 ttcgacgttgccgggcaggtaggcaccctgtggtggcatgctca 275
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>gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygromycin A biosynthetic
             gene cluster, complete sequence
          Length = 39151

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     cgacgtcgtcggccaggaag 22
             ||||||||||||||||||||
Sbjct: 22115 cgacgtcgtcggccaggaag 22096
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>gb|AF132126.1|AF132126 Pinus taeda laccase (Lac8) mRNA, complete cds
          Length = 1924

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 21  aggcacgctgtggtggcacgctca 44
           |||||| |||||||||||||||||
Sbjct: 456 aggcacactgtggtggcacgctca 479
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 22       ggcacgctgtggtggcacgc 41
                ||||||||||||||||||||
Sbjct: 22389012 ggcacgctgtggtggcacgc 22389031



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       ggcacgctgtggtggcacgc 41
                ||||||||||||||||||||
Sbjct: 22382941 ggcacgctgtggtggcacgc 22382922
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>gb|AC079921.5| Homo sapiens BAC clone RP11-360F5 from 4, complete sequence
          Length = 189796

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   atggtgggagatggaccttg 178
             ||||||||||||||||||||
Sbjct: 25028 atggtgggagatggaccttg 25009
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>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406G08
          Length = 144233

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     ggcacgctgtggtggcacgc 41
              ||||||||||||||||||||
Sbjct: 107719 ggcacgctgtggtggcacgc 107738



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ggcacgctgtggtggcacgc 41
             ||||||||||||||||||||
Sbjct: 49677 ggcacgctgtggtggcacgc 49658
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>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0663E10
          Length = 162297

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ggcacgctgtggtggcacgc 41
              ||||||||||||||||||||
Sbjct: 126720 ggcacgctgtggtggcacgc 126701
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>dbj|AK066513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J22, full
           insert sequence
          Length = 2212

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 454 ggcacgctgtggtggcacgc 473
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>dbj|AK068047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B16, full
           insert sequence
          Length = 2161

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 439 ggcacgctgtggtggcacgc 458
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>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151176

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     caggaaggcacgctgtggtggcac 39
              ||||| ||||||||||||||||||
Sbjct: 149414 caggagggcacgctgtggtggcac 149437



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 235   accatcaatggaaagcctggagatctgtacaactgc 270
             ||||||||||| ||||| || || ||||||||||||
Sbjct: 59099 accatcaatggcaagccgggcgacctgtacaactgc 59134
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>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135462

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    caggaaggcacgctgtggtggcac 39
             ||||| ||||||||||||||||||
Sbjct: 29554 caggagggcacgctgtggtggcac 29577
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>emb|AM086217.1| Zea mays mRNA for putative laccase (lac5 gene)
          Length = 2044

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 459 ggcacgctgtggtggcacgc 478
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>emb|AM086216.1| Zea mays mRNA for putative laccase (lac4 gene)
          Length = 2192

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  ggcacgctgtggtggcacgc 41
           ||||||||||||||||||||
Sbjct: 547 ggcacgctgtggtggcacgc 566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,712,303
Number of Sequences: 3902068
Number of extensions: 2712303
Number of successful extensions: 42294
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41939
Number of HSP's gapped (non-prelim): 355
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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