| Clone Name | bast46a12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | LIGE_PSEPA (P27457) Beta-etherase (Beta-aryl ether cleaving enzyme) | 29 | 2.4 | 2 | YHCG_ECOLI (P45423) Hypothetical protein yhcG | 27 | 9.2 |
|---|
>LIGE_PSEPA (P27457) Beta-etherase (Beta-aryl ether cleaving enzyme)| Length = 280 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -3 Query: 373 LPGVDGGEVEHTASRVERVVVLADDGE 293 +PG G +E T R ERV V+ DDGE Sbjct: 40 VPGGFTGILERTGGRSERVPVIVDDGE 66
>YHCG_ECOLI (P45423) Hypothetical protein yhcG| Length = 375 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 5 RTLKPHADTAPLRPHAPHSGHLLP 76 RTL H +A L+ HAP H+LP Sbjct: 184 RTLLSHDKSAMLQQHAPAETHILP 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,398,708 Number of Sequences: 219361 Number of extensions: 414594 Number of successful extensions: 1295 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1292 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)