ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493859.1| Oryza sativa (japonica cultivar-group), predic... 52 0.001
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
3gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
4gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
5emb|AJ276030.1|AHY276030 Aeromonas hydrophila yqgF gene, yhiP ge... 48 0.022
6gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipie... 48 0.022
7gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 46 0.089
8gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 46 0.089
9gb|AY109194.1| Zea mays PCO118178 mRNA sequence 44 0.35
10ref|NM_197239.1| Oryza sativa (japonica cultivar-group) putative... 42 1.4
11ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
12gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
13emb|BX842646.1| Bdellovibrio bacteriovorus complete genome, stra... 42 1.4
14emb|BX321858.1| Nitrosomonas europaea ATCC 19718, complete genom... 42 1.4
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17gb|AE004576.1| Pseudomonas aeruginosa PAO1, section 137 of 529 o... 42 1.4
18dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
20gb|AC005284.1|AC005284 Homo sapiens chromosome 17, clone hRPK.79... 42 1.4
21dbj|AB012767.1| Pseudomonas aeruginosa genes for CheZ, CheA, Che... 42 1.4
22ref|XM_465668.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
23ref|NM_191359.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
24gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete... 40 5.5
25gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
26ref|XM_862615.1| PREDICTED: Canis familiaris similar to Vacuolar... 40 5.5
27ref|XM_848532.1| PREDICTED: Canis familiaris similar to Vacuolar... 40 5.5
28ref|XM_751551.1| Ustilago maydis 521 hypothetical protein (UM004... 40 5.5
29ref|XM_757514.1| Ustilago maydis 521 hypothetical protein (UM064... 40 5.5
30ref|XM_742514.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.5
31ref|XM_545837.2| PREDICTED: Canis familiaris similar to Repulsiv... 40 5.5
32ref|NM_014317.3| Homo sapiens prenyl (decaprenyl) diphosphate sy... 40 5.5
33gb|BC049211.1| Homo sapiens prenyl (decaprenyl) diphosphate synt... 40 5.5
34gb|BC063635.1| Homo sapiens prenyl (decaprenyl) diphosphate synt... 40 5.5
35emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chr... 40 5.5
36emb|BX055062.1|CNS09ENE Single read from an extremity of a full-... 40 5.5
37emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.5
38gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 5.5
39gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.5
40emb|CR609440.1| full-length cDNA clone CS0DL005YM10 of B cells (... 40 5.5
41emb|CR591586.1| full-length cDNA clone CL0BB018ZF02 of Neuroblas... 40 5.5
42dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
43dbj|AB210838.1| Homo sapiens hDPS1 mRNA for subunit 1 of decapre... 40 5.5
44gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.5
45gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.5
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
49gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, r... 40 5.5
50dbj|AK223414.1| Homo sapiens mRNA for trans-prenyltransferase va... 40 5.5
51dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
52gb|AE004789.1| Pseudomonas aeruginosa PAO1, section 350 of 529 o... 40 5.5
53gb|AE004561.1| Pseudomonas aeruginosa PAO1, section 122 of 529 o... 40 5.5
54ref|XM_577611.1| PREDICTED: Rattus norvegicus similar to hypothe... 40 5.5
55ref|XM_214509.3| PREDICTED: Rattus norvegicus selenophosphate sy... 40 5.5
56dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
57dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
58dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
59dbj|AK120811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
60dbj|AK024802.1| Homo sapiens cDNA: FLJ21149 fis, clone CAS09472,... 40 5.5
61ref|XM_319780.2| Anopheles gambiae str. PEST ENSANGP00000005181 ... 40 5.5
62dbj|AK107912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
63emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in l... 40 5.5
64gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 40 5.5
65gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.5
66gb|AF051693.1|AF051693 Pseudomonas aeruginosa hydroxamate-type f... 40 5.5
67gb|M91609.1|IS4AAHM Plasmid pTiS4 (from Agrobacterium vitis) T2 ... 40 5.5 
>ref|XM_493859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3621

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                        
Query: 155  accgcctacacgtgcgttgtctgggccgtcaacatgcagatggcgatcacagtgaactac 214
            ||||||||||||||||| || ||||| || |||  ||||||| || | || |  ||||||
Sbjct: 3145 accgcctacacgtgcgtggtgtgggcggtgaacgcgcagatgacggtgacggccaactac 3204

                                          
Query: 215  ttcacccttgtccagcacatctgcatctgg 244
            |||||||| || ||||||  ||||||||||
Sbjct: 3205 ttcaccctggtgcagcacgcctgcatctgg 3234



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagaacctgctcttccggtggtcaaggctcctaggctggatgctgcatggcgtcggcagt 61
            ||||||||||| ||||| ||||| ||||| || || ||||||  | | ||||| | ||| 
Sbjct: 2992 cagaacctgctgttccgatggtcgaggctgctggggtggatggcgtacggcgtggccagc 3051

                                
Query: 62   gctgtgatcatcttcttcct 81
            |  |||||||||||||||||
Sbjct: 3052 ggcgtgatcatcttcttcct 3071
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 155   accgcctacacgtgcgttgtctgggccgtcaacatgcagatggcgatcacagtgaactac 214
             ||||||||||||||||| || ||||| || |||  ||||||| || | || |  ||||||
Sbjct: 33238 accgcctacacgtgcgtggtgtgggcggtgaacgcgcagatgacggtgacggccaactac 33297

                                           
Query: 215   ttcacccttgtccagcacatctgcatctgg 244
             |||||||| || ||||||  ||||||||||
Sbjct: 33298 ttcaccctggtgcagcacgcctgcatctgg 33327



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 371      ctgctggtggcggtggcggc 390
                ||||||||||||||||||||
Sbjct: 29041642 ctgctggtggcggtggcggc 29041623



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 2     cagaacctgctcttccggtggtcaaggctcctaggctggatgctgcatggcgtcggcagt 61
             ||||||||||| ||||| ||||| ||||| || || ||||||  | | ||||| | ||| 
Sbjct: 33085 cagaacctgctgttccgatggtcgaggctgctggggtggatggcgtacggcgtggccagc 33144

                                 
Query: 62    gctgtgatcatcttcttcct 81
             |  |||||||||||||||||
Sbjct: 33145 ggcgtgatcatcttcttcct 33164
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 155   accgcctacacgtgcgttgtctgggccgtcaacatgcagatggcgatcacagtgaactac 214
             ||||||||||||||||| || ||||| || |||  ||||||| || | || |  ||||||
Sbjct: 33238 accgcctacacgtgcgtggtgtgggcggtgaacgcgcagatgacggtgacggccaactac 33297

                                           
Query: 215   ttcacccttgtccagcacatctgcatctgg 244
             |||||||| || ||||||  ||||||||||
Sbjct: 33298 ttcaccctggtgcagcacgcctgcatctgg 33327



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 2     cagaacctgctcttccggtggtcaaggctcctaggctggatgctgcatggcgtcggcagt 61
             ||||||||||| ||||| ||||| ||||| || || ||||||  | | ||||| | ||| 
Sbjct: 33085 cagaacctgctgttccgatggtcgaggctgctggggtggatggcgtacggcgtggccagc 33144

                                 
Query: 62    gctgtgatcatcttcttcct 81
             |  |||||||||||||||||
Sbjct: 33145 ggcgtgatcatcttcttcct 33164
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 155   accgcctacacgtgcgttgtctgggccgtcaacatgcagatggcgatcacagtgaactac 214
             ||||||||||||||||| || ||||| || |||  ||||||| || | || |  ||||||
Sbjct: 42467 accgcctacacgtgcgtggtgtgggcggtgaacgcgcagatgacggtgacggccaactac 42526

                                           
Query: 215   ttcacccttgtccagcacatctgcatctgg 244
             |||||||| || ||||||  ||||||||||
Sbjct: 42527 ttcaccctggtgcagcacgcctgcatctgg 42556



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 2     cagaacctgctcttccggtggtcaaggctcctaggctggatgctgcatggcgtcggcagt 61
             ||||||||||| ||||| ||||| ||||| || || ||||||  | | ||||| | ||| 
Sbjct: 42314 cagaacctgctgttccgatggtcgaggctgctggggtggatggcgtacggcgtggccagc 42373

                                 
Query: 62    gctgtgatcatcttcttcct 81
             |  |||||||||||||||||
Sbjct: 42374 ggcgtgatcatcttcttcct 42393
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>emb|AJ276030.1|AHY276030 Aeromonas hydrophila yqgF gene, yhiP gene, cepH gene, ORF1 and ORF2
           (partial)
          Length = 5579

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 363 tggtgaccctgctggtggcggtgg 386
           ||||||||||||||||||||||||
Sbjct: 769 tggtgaccctgctggtggcggtgg 746
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>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 363   tggtgaccctgctggtggcggtgg 386
             ||||||||||||||||||||||||
Sbjct: 79526 tggtgaccctgctggtggcggtgg 79549
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 363     tggtgaccctgctggtggcggtg 385
               |||||||||||||||||||||||
Sbjct: 4597187 tggtgaccctgctggtggcggtg 4597209
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 369     ccctgctggtggcggtggcggcg 391
               |||||||||||||||||||||||
Sbjct: 4032502 ccctgctggtggcggtggcggcg 4032480
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>gb|AY109194.1| Zea mays PCO118178 mRNA sequence
          Length = 501

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 192 agatggcgatcacagtgaactacttcacccttgtccagcacatctgcatctggagcggca 251
           |||||||| || | ||||||||||||||| |  |||||||||| | ||| ||| || |||
Sbjct: 6   agatggcgctctctgtgaactacttcaccataatccagcacatattcatatggggcagca 65

                                     
Query: 252 tcttcctatggtacctgttcctcata 277
           |   | |||||||||| |||||||||
Sbjct: 66  ttgccgtatggtacctcttcctcata 91
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>ref|NM_197239.1| Oryza sativa (japonica cultivar-group) putative lipid transfer
           protein (OSJNBa0062C05.14), mRNA
          Length = 303

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 371 ctgctggtggcggtggcggcg 391
           |||||||||||||||||||||
Sbjct: 34  ctgctggtggcggtggcggcg 54
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>ref|NM_187323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 371 ctgctggtggcggtggcggcg 391
           |||||||||||||||||||||
Sbjct: 40  ctgctggtggcggtggcggcg 60
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>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0062C05 map S21174S, complete sequence
          Length = 178867

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   ctgctggtggcggtggcggcg 391
             |||||||||||||||||||||
Sbjct: 66925 ctgctggtggcggtggcggcg 66905
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>emb|BX842646.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 1/11
          Length = 349761

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    ctgctggtggcggtggcggcg 391
              |||||||||||||||||||||
Sbjct: 335978 ctgctggtggcggtggcggcg 335998
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>emb|BX321858.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 3/10
          Length = 306050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 210    actacttcacccttgtccagcacat 234
              |||||||||||||||||||| ||||
Sbjct: 160250 actacttcacccttgtccagtacat 160274
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 371      ctgctggtggcggtggcggcg 391
                |||||||||||||||||||||
Sbjct: 18771504 ctgctggtggcggtggcggcg 18771484
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 371      ctgctggtggcggtggcggcg 391
                |||||||||||||||||||||
Sbjct: 17437347 ctgctggtggcggtggcggcg 17437367
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>gb|AE004576.1| Pseudomonas aeruginosa PAO1, section 137 of 529 of the complete
           genome
          Length = 10565

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 376 ggtggcggtggcggcgctcat 396
           |||||||||||||||||||||
Sbjct: 97  ggtggcggtggcggcgctcat 77
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    ctgctggtggcggtggcggcg 391
              |||||||||||||||||||||
Sbjct: 105571 ctgctggtggcggtggcggcg 105591
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 371      ctgctggtggcggtggcggcg 391
                |||||||||||||||||||||
Sbjct: 18782358 ctgctggtggcggtggcggcg 18782338
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>gb|AC005284.1|AC005284 Homo sapiens chromosome 17, clone hRPK.795_F_17, complete sequence
          Length = 192802

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    cggcagtgctgtgatcatctt 75
             |||||||||||||||||||||
Sbjct: 52639 cggcagtgctgtgatcatctt 52619
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>dbj|AB012767.1| Pseudomonas aeruginosa genes for CheZ, CheA, CheB, ORF1, ORF2, ORF3,
            ORF4 and CheW, complete cds
          Length = 10729

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 376  ggtggcggtggcggcgctcat 396
            |||||||||||||||||||||
Sbjct: 7115 ggtggcggtggcggcgctcat 7095
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>ref|XM_465668.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 147 gctggtggcggtggcggcgc 166
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>ref|NM_191359.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 368 accctgctggtggcggtggc 387
           ||||||||||||||||||||
Sbjct: 34  accctgctggtggcggtggc 53
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>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence
          Length = 193320

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    atctgcatctggagcggcat 252
              ||||||||||||||||||||
Sbjct: 107621 atctgcatctggagcggcat 107602
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ctgctggtggcggtggcggc 390
             ||||||||||||||||||||
Sbjct: 51697 ctgctggtggcggtggcggc 51678
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>ref|XM_862615.1| PREDICTED: Canis familiaris similar to Vacuolar ATP synthase
           subunit S1 precursor (V-ATPase S1 subunit) (V-ATPase S1
           accessory protein) (V-ATPase Ac45 subunit) (XAP-3),
           transcript variant 2 (LOC610922), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 tgctggtggcggtggcggcg 391
           ||||||||||||||||||||
Sbjct: 88  tgctggtggcggtggcggcg 107
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>ref|XM_848532.1| PREDICTED: Canis familiaris similar to Vacuolar ATP synthase
           subunit S1 precursor (V-ATPase S1 subunit) (V-ATPase S1
           accessory protein) (V-ATPase Ac45 subunit) (XAP-3),
           transcript variant 1 (LOC610922), mRNA
          Length = 2059

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 tgctggtggcggtggcggcg 391
           ||||||||||||||||||||
Sbjct: 110 tgctggtggcggtggcggcg 129
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>ref|XM_751551.1| Ustilago maydis 521 hypothetical protein (UM00497.1) partial mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   accatcgcgtcactcaagca 102
            ||||||||||||||||||||
Sbjct: 1157 accatcgcgtcactcaagca 1176
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>ref|XM_757514.1| Ustilago maydis 521 hypothetical protein (UM06460.1) partial mRNA
          Length = 11115

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tggcggtggcggcgctcatc 397
             ||||||||||||||||||||
Sbjct: 10342 tggcggtggcggcgctcatc 10323
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>ref|XM_742514.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g04710) partial
            mRNA
          Length = 3993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  aaagatggcgaggtcataga 135
            ||||||||||||||||||||
Sbjct: 3200 aaagatggcgaggtcataga 3181
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>ref|XM_545837.2| PREDICTED: Canis familiaris similar to Repulsive guidance molecule
           A precursor (RGM domain family member A) (LOC488719),
           mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 363 tggtgaccctgctggtggcggtggcggc 390
           |||||| | |||||||||||||||||||
Sbjct: 802 tggtgagcttgctggtggcggtggcggc 775
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>ref|NM_014317.3| Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1
           (PDSS1), mRNA
          Length = 1679

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 57  gctggtggcggtggcggcgc 76
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>gb|BC049211.1| Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1,
           mRNA (cDNA clone IMAGE:5241998), partial cds
          Length = 1690

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 9   gctggtggcggtggcggcgc 28
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>gb|BC063635.1| Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1,
           mRNA (cDNA clone MGC:70953 IMAGE:4397753), complete cds
          Length = 1458

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 27  gctggtggcggtggcggcgc 46
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>emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chromosome 10 Contains
             three novel genes, the gene for trans-prenyltransferase
             (TPT), the 3' end of the SSH3BP gene for spectrin SH3
             domain binding protein 1, a heat shock protein pseudogene
             and a CpG island, complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   gctggtggcggtggcggcgc 392
             ||||||||||||||||||||
Sbjct: 86680 gctggtggcggtggcggcgc 86699
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>emb|BX055062.1|CNS09ENE Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC33CA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 917

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 tgctggtggcggtggcggcg 391
           ||||||||||||||||||||
Sbjct: 658 tgctggtggcggtggcggcg 639
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 373     gctggtggcggtggcggcgc 392
               ||||||||||||||||||||
Sbjct: 3206495 gctggtggcggtggcggcgc 3206514
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 369    ccctgctggtggcggtggcggcgc 392
              |||||| |||||||||||||||||
Sbjct: 139017 ccctgccggtggcggtggcggcgc 139040
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 369     ccctgctggtggcggtggcggcgc 392
               ||||||||| ||||||||||||||
Sbjct: 1284679 ccctgctggcggcggtggcggcgc 1284656
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>emb|CR609440.1| full-length cDNA clone CS0DL005YM10 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1560

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 33  gctggtggcggtggcggcgc 52
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>emb|CR591586.1| full-length cDNA clone CL0BB018ZF02 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1607

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 57  gctggtggcggtggcggcgc 76
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    cctgctggtggcggtggcgg 389
              ||||||||||||||||||||
Sbjct: 217486 cctgctggtggcggtggcgg 217467
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>dbj|AB210838.1| Homo sapiens hDPS1 mRNA for subunit 1 of decaprenyl diphosphate
           synthase, complete cds
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 57  gctggtggcggtggcggcgc 76
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     aggcgctggggggcgcgcca 352
               ||||||||||||||||||||
Sbjct: 3346902 aggcgctggggggcgcgcca 3346883
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     gacctgtcgatcctcggcgc 153
               ||||||||||||||||||||
Sbjct: 1649005 gacctgtcgatcctcggcgc 1649024



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 321     tggtgttctcggaggcgctg 340
               ||||||||||||||||||||
Sbjct: 1204151 tggtgttctcggaggcgctg 1204170
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      tggtggcggtggcggcgctc 394
                ||||||||||||||||||||
Sbjct: 24323293 tggtggcggtggcggcgctc 24323274
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 373      gctggtggcggtggcggcgc 392
                ||||||||||||||||||||
Sbjct: 16700765 gctggtggcggtggcggcgc 16700746
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 368      accctgctggtggcggtggc 387
                ||||||||||||||||||||
Sbjct: 32158731 accctgctggtggcggtggc 32158750
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>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
              BACR03B07, complete sequence
          Length = 170089

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    atctgcatctggagcggcat 252
              ||||||||||||||||||||
Sbjct: 100389 atctgcatctggagcggcat 100408
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>dbj|AK223414.1| Homo sapiens mRNA for trans-prenyltransferase variant, clone:
           FCC109D08
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 64  gctggtggcggtggcggcgc 83
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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   accctgctggtggcggtggc 387
             ||||||||||||||||||||
Sbjct: 29484 accctgctggtggcggtggc 29503
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>gb|AE004789.1| Pseudomonas aeruginosa PAO1, section 350 of 529 of the complete genome
          Length = 17124

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 363   tggtgaccctgctggtggcggtgg 386
             |||||||||||||| |||||||||
Sbjct: 16381 tggtgaccctgctgctggcggtgg 16358
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>gb|AE004561.1| Pseudomonas aeruginosa PAO1, section 122 of 529 of the complete
            genome
          Length = 10757

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  cctgctggtggcggtggcgg 389
            ||||||||||||||||||||
Sbjct: 6933 cctgctggtggcggtggcgg 6952
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>ref|XM_577611.1| PREDICTED: Rattus norvegicus similar to hypothetical protein
           E230025N22 (LOC502155), mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 356 tactgggtggtgaccctgctggtg 379
           ||||||||||||||||| ||||||
Sbjct: 584 tactgggtggtgaccctactggtg 607
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>ref|XM_214509.3| PREDICTED: Rattus norvegicus selenophosphate synthetase 1
           (predicted) (Sephs1_predicted), mRNA
          Length = 3400

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 tgctggtggcggtggcggcg 391
           ||||||||||||||||||||
Sbjct: 249 tgctggtggcggtggcggcg 230
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>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414C05
          Length = 123105

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   tggtggcggtggcggcgctc 394
             ||||||||||||||||||||
Sbjct: 47923 tggtggcggtggcggcgctc 47904
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>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   gctggtggcggtggcggcgc 392
             ||||||||||||||||||||
Sbjct: 77820 gctggtggcggtggcggcgc 77801
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>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519B12
          Length = 147542

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    gctggtggcggtggcggcgc 392
              ||||||||||||||||||||
Sbjct: 142732 gctggtggcggtggcggcgc 142713
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>dbj|AK120811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014G11, full
           insert sequence
          Length = 3234

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 ctgctggtggcggtggcggc 390
           ||||||||||||||||||||
Sbjct: 239 ctgctggtggcggtggcggc 258
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>dbj|AK024802.1| Homo sapiens cDNA: FLJ21149 fis, clone CAS09472, highly similar to
           AF118395 Homo sapiens trans-prenyltransferase mRNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 gctggtggcggtggcggcgc 392
           ||||||||||||||||||||
Sbjct: 64  gctggtggcggtggcggcgc 83
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>ref|XM_319780.2| Anopheles gambiae str. PEST ENSANGP00000005181
           (ENSANGG00000003994), partial mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 tgctggtggcggtggcggcg 391
           ||||||||||||||||||||
Sbjct: 264 tgctggtggcggtggcggcg 283
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>dbj|AK107912.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-G07, full
           insert sequence
          Length = 735

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 375 tggtggcggtggcggcgctc 394
           ||||||||||||||||||||
Sbjct: 139 tggtggcggtggcggcgctc 120
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>emb|CR925778.5| Zebrafish DNA sequence from clone DKEY-63L2 in linkage group 10, complete
              sequence
          Length = 211740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    gtggtgaccctgctggtggc 381
              ||||||||||||||||||||
Sbjct: 184051 gtggtgaccctgctggtggc 184070
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>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
             sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   atctgcatctggagcggcat 252
             ||||||||||||||||||||
Sbjct: 62542 atctgcatctggagcggcat 62561
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     atcacgccgtcgttctcgac 309
               ||||||||||||||||||||
Sbjct: 2988063 atcacgccgtcgttctcgac 2988044
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>gb|AF051693.1|AF051693 Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor
           (pfuA) gene, complete cds
          Length = 2719

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 cctgctggtggcggtggcgg 389
           ||||||||||||||||||||
Sbjct: 51  cctgctggtggcggtggcgg 70
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>gb|M91609.1|IS4AAHM Plasmid pTiS4 (from Agrobacterium vitis) T2 tryptophan monooxygenase
            (iaaM) and indole acetamide hydrolase (iaaH) genes,
            complete cds
          Length = 5516

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 124  cgaggtcatagacctgtcgatcct 147
            ||||||||||||||||| ||||||
Sbjct: 1252 cgaggtcatagacctgtggatcct 1275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,130,699
Number of Sequences: 3902068
Number of extensions: 3130699
Number of successful extensions: 71905
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 70786
Number of HSP's gapped (non-prelim): 1112
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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