ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 458 bits (231), Expect = e-126 Identities = 234/235 (99%) Strand = Plus / Plus Query: 1 taactctggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacga 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1627 taactctggcgttgatggccagatctggcagcttgccaaggcttacgcctctgtcgacga 1686 Query: 61 ctctgcgtggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 ctctgcgtggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgtt 1746 Query: 121 cgtgattgcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagccc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 cgtgattgcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagccc 1806 Query: 181 gcactaccgcgacacgttgaacatcaatgccctggcgcggaccaccctcatcaac 235 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 gcactaccgcgacacgttgaacatcaatgccctggcgcggaccaccctcatcaac 1861
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1326 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 1385 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1386 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 1445 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1446 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 1505 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 1506 tgaacatcaacgctctggc 1524
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1805 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 1864 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1865 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 1924 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1925 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 1984 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 1985 tgaacatcaacgctctggc 2003
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 212 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 271 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 272 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 331 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 332 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 391 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 392 tgaacatcaacgctctggc 410
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1477 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 1536 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1537 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 1596 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1597 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 1656 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 1657 tgaacatcaacgctctggc 1675
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 1806 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 1865 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1866 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 1925 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1926 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 1985 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 1986 tgaacatcaacgctctggc 2004
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 260 bits (131), Expect = 2e-66 Identities = 182/199 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 377 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 436 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 437 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 496 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 497 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 556 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 557 tgaacatcaacgctctggc 575
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 252 bits (127), Expect = 4e-64 Identities = 181/199 (90%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| |||| |||| Sbjct: 1799 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcgccagc 1858 Query: 78 ttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaacc 137 | |||||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1859 tgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaacc 1918 Query: 138 ggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgt 197 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1919 ggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacga 1978 Query: 198 tgaacatcaatgccctggc 216 |||||||||| || ||||| Sbjct: 1979 tgaacatcaacgctctggc 1997
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 222 bits (112), Expect = 4e-55 Identities = 172/192 (89%) Strand = Plus / Plus Query: 24 tctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatca 83 |||||||||| ||||||||||| |||| ||| |||||||||| ||||||||||| |||| Sbjct: 1782 tctggcagctcgccaaggcttatgcctgcgtaaacgactctgcctggcatcagctgatca 1841 Query: 84 gccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaac 143 |||||||||||||||| || ||||||||||| |||||||| || ||||| |||||||| | Sbjct: 1842 gccactggctgaacacgcacgcggtgatcgagccgttcgtaatcgcgacaaaccggcagc 1901 Query: 144 tcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaaca 203 |||| |||||||| || ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1902 tcagcgtggtgcatcccgtgcacaagctgctgagcccgcactaccgtgacacgctgaaca 1961 Query: 204 tcaatgccctgg 215 |||| ||||||| Sbjct: 1962 tcaacgccctgg 1973
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 196 bits (99), Expect = 2e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| |||| | ||||| ||||||| | ||||| || || |||||| Sbjct: 1501 tggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagc 1560 Query: 86 cactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactc 145 |||||||||||||| || || ||||| || ||||||||||| |||||||||||||| ||| Sbjct: 1561 cactggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctc 1620 Query: 146 agtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatc 205 || ||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1621 agcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatc 1680 Query: 206 aatgccctggcgcgg 220 || |||||||||||| Sbjct: 1681 aacgccctggcgcgg 1695
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 165 bits (83), Expect = 8e-38 Identities = 116/127 (91%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 64669 ggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaaccggcagctcagcg 64728 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 64729 tggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacgatgaacatcaacg 64788 Query: 210 ccctggc 216 | ||||| Sbjct: 64789 ctctggc 64795 Score = 157 bits (79), Expect = 2e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || ||||| || ||||||||||| |||||||||||||| ||||| | Sbjct: 46109 ggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcg 46168 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct: 46169 tgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacg 46228 Query: 210 ccctggcgcgg 220 ||||||||||| Sbjct: 46229 ccctggcgcgg 46239 Score = 99.6 bits (50), Expect = 4e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 64512 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 64571 Query: 78 ttatcagccactgg 91 | |||||||||||| Sbjct: 64572 tgatcagccactgg 64585 Score = 44.1 bits (22), Expect = 0.19 Identities = 55/66 (83%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| |||| | ||||| ||||||| | ||||| || || |||||| Sbjct: 45967 tggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagc 46026 Query: 86 cactgg 91 |||||| Sbjct: 46027 cactgg 46032 Score = 44.1 bits (22), Expect = 0.19 Identities = 52/62 (83%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||| ||||||||||| ||||| || || |||||||| || || ||||| || ||||||| Sbjct: 5070 ggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtg 5129 Query: 150 tg 151 || Sbjct: 5130 tg 5131 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactgg 91 ||||| |||||||||||||||||| Sbjct: 4969 tggcaccagcttatcagccactgg 4992
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 8e-38 Identities = 116/127 (91%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 27820539 ggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaaccggcagctcagcg 27820598 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 27820599 tggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacgatgaacatcaacg 27820658 Query: 210 ccctggc 216 | ||||| Sbjct: 27820659 ctctggc 27820665 Score = 157 bits (79), Expect = 2e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || ||||| || ||||||||||| |||||||||||||| ||||| | Sbjct: 27801979 ggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcg 27802038 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct: 27802039 tgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacg 27802098 Query: 210 ccctggcgcgg 220 ||||||||||| Sbjct: 27802099 ccctggcgcgg 27802109 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 30025391 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 30025450 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 30025451 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 30025510 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| || ||||||||| Sbjct: 30025511 cgcgacaccatgaccatcaacgcgctggcgcgg 30025543 Score = 99.6 bits (50), Expect = 4e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 27820382 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 27820441 Query: 78 ttatcagccactgg 91 | |||||||||||| Sbjct: 27820442 tgatcagccactgg 27820455 Score = 44.1 bits (22), Expect = 0.19 Identities = 55/66 (83%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| |||| | ||||| ||||||| | ||||| || || |||||| Sbjct: 27801837 tggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagc 27801896 Query: 86 cactgg 91 |||||| Sbjct: 27801897 cactgg 27801902 Score = 44.1 bits (22), Expect = 0.19 Identities = 52/62 (83%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||| ||||||||||| ||||| || || |||||||| || || ||||| || ||||||| Sbjct: 27760941 ggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtg 27761000 Query: 150 tg 151 || Sbjct: 27761001 tg 27761002 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactgg 91 ||||| |||||||||||||||||| Sbjct: 27760840 tggcaccagcttatcagccactgg 27760863
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 8e-38 Identities = 116/127 (91%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || |||||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 27911863 ggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaaccggcagctcagcg 27911922 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 27911923 tggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacgatgaacatcaacg 27911982 Query: 210 ccctggc 216 | ||||| Sbjct: 27911983 ctctggc 27911989 Score = 157 bits (79), Expect = 2e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || ||||| || ||||||||||| |||||||||||||| ||||| | Sbjct: 27893303 ggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcg 27893362 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct: 27893363 tgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacg 27893422 Query: 210 ccctggcgcgg 220 ||||||||||| Sbjct: 27893423 ccctggcgcgg 27893433 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 30116813 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 30116872 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 30116873 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 30116932 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| || ||||||||| Sbjct: 30116933 cgcgacaccatgaccatcaacgcgctggcgcgg 30116965 Score = 99.6 bits (50), Expect = 4e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 18 gccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagc 77 |||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 27911706 gccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagc 27911765 Query: 78 ttatcagccactgg 91 | |||||||||||| Sbjct: 27911766 tgatcagccactgg 27911779 Score = 44.1 bits (22), Expect = 0.19 Identities = 55/66 (83%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| |||| | ||||| ||||||| | ||||| || || |||||| Sbjct: 27893161 tggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagc 27893220 Query: 86 cactgg 91 |||||| Sbjct: 27893221 cactgg 27893226 Score = 44.1 bits (22), Expect = 0.19 Identities = 52/62 (83%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||| ||||||||||| ||||| || || |||||||| || || ||||| || ||||||| Sbjct: 27852264 ggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtg 27852323 Query: 150 tg 151 || Sbjct: 27852324 tg 27852325 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactgg 91 ||||| |||||||||||||||||| Sbjct: 27852163 tggcaccagcttatcagccactgg 27852186
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 165 bits (83), Expect = 8e-38 Identities = 164/191 (85%) Strand = Plus / Plus Query: 30 agcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagccact 89 |||| |||||||| |||| | ||||| | ||||| | |||||| ||||| ||||||||| Sbjct: 1561 agctcgccaaggcctacgtcgccgtcaatgactccgggtggcaccagctcgtcagccact 1620 Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || |||||||| || ||||||||||| ||||||||||||| || || | Sbjct: 1621 ggctgaacactcacgcggtgatggagccgttcgtgatctcgacgaaccggcaccttagcg 1680 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || |||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct: 1681 tgacgcacccggtgcacaagctgctgagcccgcactaccgcgacaccatgaccatcaacg 1740 Query: 210 ccctggcgcgg 220 | ||||||||| Sbjct: 1741 cgctggcgcgg 1751
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 157 bits (79), Expect = 2e-35 Identities = 118/131 (90%) Strand = Plus / Minus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || || ||||| || ||||||||||| |||||||||||||| ||||| | Sbjct: 11914 ggctgaacacgcacgctgtgatggagccgttcgtgatcgcgacgaaccggcagctcagcg 11855 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct: 11854 tgacgcacccggtgcacaagctgctgagcccgcactaccgcgacacgatgaccatcaacg 11795 Query: 210 ccctggcgcgg 220 ||||||||||| Sbjct: 11794 ccctggcgcgg 11784 Score = 44.1 bits (22), Expect = 0.19 Identities = 52/62 (83%) Strand = Plus / Minus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||| ||||||||||| ||||| || || |||||||| || || ||||| || ||||||| Sbjct: 52953 ggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtg 52894 Query: 150 tg 151 || Sbjct: 52893 tg 52892 Score = 44.1 bits (22), Expect = 0.19 Identities = 55/66 (83%) Strand = Plus / Minus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| |||| | ||||| ||||||| | ||||| || || |||||| Sbjct: 12056 tggcagctcgccaaggcctacgtcgccgtcaacgactccggctggcaccaactgatcagc 11997 Query: 86 cactgg 91 |||||| Sbjct: 11996 cactgg 11991 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 tggcatcagcttatcagccactgg 91 ||||| |||||||||||||||||| Sbjct: 53054 tggcaccagcttatcagccactgg 53031
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 151 bits (76), Expect = 1e-33 Identities = 124/140 (88%) Strand = Plus / Plus Query: 81 tcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggc 140 ||||||||||||||||||| || |||||||| || ||||||||||| |||||||||||| Sbjct: 41 tcagccactggctgaacactcacgcggtgatggagccgttcgtgatctcgacgaaccggc 100 Query: 141 aactcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttga 200 | || || ||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 101 accttagcgtgacgcacccggtgcacaagctgctgagcccgcactaccgcgacaccatga 160 Query: 201 acatcaatgccctggcgcgg 220 |||||| || ||||||||| Sbjct: 161 ccatcaacgcgctggcgcgg 180
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 149 bits (75), Expect = 5e-33 Identities = 165/195 (84%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| || | | ||||| ||||||||| ||||| || || ||||| Sbjct: 1495 tggcagctcgccaaggcctatgtcgccgtcaacgactctggctggcaccaactcgtcagc 1554 Query: 86 cactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactc 145 |||||||||||||| || |||||||| || ||||||||||| |||||||||||||| || Sbjct: 1555 cactggctgaacacccacgcggtgatggagccgttcgtgatcgcgacgaaccggcagctg 1614 Query: 146 agtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatc 205 || ||| |||||||||||||||||| |||||| |||||| ||||||||| ||| |||| Sbjct: 1615 agcgtgacgcacccggtgcacaagctcctgagctcgcacttccgcgacaccatgaccatc 1674 Query: 206 aatgccctggcgcgg 220 || || ||||||||| Sbjct: 1675 aacgcgctggcgcgg 1689
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 117 bits (59), Expect = 2e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 90 ggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtg 149 |||||||||| || |||||||| || ||||||||||| |||||||||||||| || || | Sbjct: 3626 ggctgaacacccacgcggtgatggagccgttcgtgatcgcgacgaaccggcagctgagcg 3685 Query: 150 tggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatcaatg 209 || |||||||||||||||||| |||||| |||||| ||||||||| ||| |||||| | Sbjct: 3686 tgacgcacccggtgcacaagctcctgagctcgcacttccgcgacaccatgaccatcaacg 3745 Query: 210 ccctggcgcgg 220 | ||||||||| Sbjct: 3746 cgctggcgcgg 3756
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1555 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 1614 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 1615 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 1674 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| || ||||||||| Sbjct: 1675 cgcgacaccatgaccatcaacgcgctggcgcgg 1707
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1640 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 1699 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 1700 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 1759 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| | |||||||||| Sbjct: 1760 cgcgacaccatgaccatcaacggcctggcgcgg 1792
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Minus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 82360 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 82301 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 82300 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 82241 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| || ||||||||| Sbjct: 82240 cgcgacaccatgaccatcaacgcgctggcgcgg 82208
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 113 bits (57), Expect = 3e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || || ||||| || Sbjct: 1670 tggcaccagctgatcagccactggctcaacacgcacgccgtgatggagcccttcgtcatc 1729 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 1730 gccaccaaccggcagctcagcgtggcgcacccggtgcacaagctgctgctgccgcactac 1789 Query: 188 cgcgacacgttgaacatcaatgccctggcgcgg 220 |||||||| ||| |||||| || ||||||||| Sbjct: 1790 cgcgacaccatgaccatcaacgcgctggcgcgg 1822
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 95.6 bits (48), Expect = 6e-17 Identities = 126/152 (82%) Strand = Plus / Plus Query: 8 ggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcg 67 ||||| || ||||| |||||||||||||||||||| |||| | ||||| | |||| || Sbjct: 136372 ggcgtggagggccacatctggcagcttgccaaggcctacgtcaccgtcaatgactactcg 136431 Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| ||||||||||||| ||||| || |||||||| || ||||||| ||| Sbjct: 136432 tggcaccagctcgtcagccactggctcaacacgcacgcggtgatggagccgttcgccatt 136491 Query: 128 gcgacgaaccggcaactcagtgtggtgcaccc 159 || ||| ||||||| ||||| |||| |||||| Sbjct: 136492 gccacgcaccggcagctcagcgtggcgcaccc 136523
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 95.6 bits (48), Expect = 6e-17 Identities = 126/152 (82%) Strand = Plus / Plus Query: 8 ggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcg 67 ||||| || ||||| |||||||||||||||||||| |||| | ||||| | |||| || Sbjct: 20829311 ggcgtggagggccacatctggcagcttgccaaggcctacgtcaccgtcaatgactactcg 20829370 Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| ||||||||||||| ||||| || |||||||| || ||||||| ||| Sbjct: 20829371 tggcaccagctcgtcagccactggctcaacacgcacgcggtgatggagccgttcgccatt 20829430 Query: 128 gcgacgaaccggcaactcagtgtggtgcaccc 159 || ||| ||||||| ||||| |||| |||||| Sbjct: 20829431 gccacgcaccggcagctcagcgtggcgcaccc 20829462
>dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M03, full insert sequence Length = 2930 Score = 95.6 bits (48), Expect = 6e-17 Identities = 126/152 (82%) Strand = Plus / Plus Query: 8 ggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcg 67 ||||| || ||||| |||||||||||||||||||| |||| | ||||| | |||| || Sbjct: 1578 ggcgtggagggccacatctggcagcttgccaaggcctacgtcaccgtcaatgactactcg 1637 Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| ||||||||||||| ||||| || |||||||| || ||||||| ||| Sbjct: 1638 tggcaccagctcgtcagccactggctcaacacgcacgcggtgatggagccgttcgccatt 1697 Query: 128 gcgacgaaccggcaactcagtgtggtgcaccc 159 || ||| ||||||| ||||| |||| |||||| Sbjct: 1698 gccacgcaccggcagctcagcgtggcgcaccc 1729
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 95.6 bits (48), Expect = 6e-17 Identities = 126/152 (82%) Strand = Plus / Plus Query: 8 ggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcg 67 ||||| || ||||| |||||||||||||||||||| |||| | ||||| | |||| || Sbjct: 1578 ggcgtggagggccacatctggcagcttgccaaggcctacgtcaccgtcaatgactactcg 1637 Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| ||||||||||||| ||||| || |||||||| || ||||||| ||| Sbjct: 1638 tggcaccagctcgtcagccactggctcaacacgcacgcggtgatggagccgttcgccatt 1697 Query: 128 gcgacgaaccggcaactcagtgtggtgcaccc 159 || ||| ||||||| ||||| |||| |||||| Sbjct: 1698 gccacgcaccggcagctcagcgtggcgcaccc 1729
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 95.6 bits (48), Expect = 6e-17 Identities = 126/152 (82%) Strand = Plus / Plus Query: 8 ggcgttgatggccagatctggcagcttgccaaggcttacgcctccgtcgacgactctgcg 67 ||||| || ||||| |||||||||||||||||||| |||| | ||||| | |||| || Sbjct: 21139546 ggcgtggagggccacatctggcagcttgccaaggcctacgtcaccgtcaatgactactcg 21139605 Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| ||||||||||||| ||||| || |||||||| || ||||||| ||| Sbjct: 21139606 tggcaccagctcgtcagccactggctcaacacgcacgcggtgatggagccgttcgccatt 21139665 Query: 128 gcgacgaaccggcaactcagtgtggtgcaccc 159 || ||| ||||||| ||||| |||| |||||| Sbjct: 21139666 gccacgcaccggcagctcagcgtggcgcaccc 21139697
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 87.7 bits (44), Expect = 1e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| ||||| |||||||||||||| ||||| || || ||||| || ||||||||||| Sbjct: 1564 tggcaccagctcatcagccactggctcaacacccacgccgtgatggagccgttcgtgatc 1623 Query: 128 gcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcccgcactac 187 || || |||||||| ||||| ||| |||||| ||||||||||| || ||||||||| Sbjct: 1624 gccaccaaccggcagctcagcgtgacgcaccccgtgcacaagctcctcctgccgcactac 1683 Query: 188 cgcgacacgttgaacatcaa 207 || ||||| |||||||||| Sbjct: 1684 cgtgacaccatgaacatcaa 1703
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 83.8 bits (42), Expect = 2e-13 Identities = 147/182 (80%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatcagc 85 |||||||| |||||||| ||||||||||| |||||| | |||||| ||||| |||||| Sbjct: 1558 tggcagctcgccaaggcctacgcctccgtgaacgactacgggtggcaccagctcatcagc 1617 Query: 86 cactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactc 145 |||||||| ||||| || || || || || || ||||| || || || ||| |||| ||| Sbjct: 1618 cactggctcaacacgcacgccgtcatggagcccttcgtcatcgccaccaacaggcagctc 1677 Query: 146 agtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaacatc 205 || || |||||||| ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 1678 agcgtcacccacccggtctacaagctcctgcacccgcactaccgcgacaccatgaacatc 1737 Query: 206 aa 207 || Sbjct: 1738 aa 1739
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 79.8 bits (40), Expect = 4e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| |||||||||||||||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1534 tggcaccagcttatcagccactggctcaacacacatgctgtgatggagcccttcgtgatc 1593 Query: 128 gcgacgaaccggcaactcagtgtg 151 || || ||||| || ||||||||| Sbjct: 1594 gctacaaaccgccagctcagtgtg 1617
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 79.8 bits (40), Expect = 4e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 68 tggcatcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgatt 127 ||||| |||||||||||||||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1608 tggcaccagcttatcagccactggctcaacacacatgctgtgatggagcccttcgtgatc 1667 Query: 128 gcgacgaaccggcaactcagtgtg 151 || || ||||| || ||||||||| Sbjct: 1668 gctacaaaccgccagctcagtgtg 1691
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 79.8 bits (40), Expect = 4e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 120 tcgtgattgcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctgctgagcc 179 ||||||| |||||||||||||| || || ||| |||||||||||||||||| |||||| Sbjct: 1058 tcgtgatcgcgacgaaccggcagctgagcgtgacgcacccggtgcacaagctcctgagct 1117 Query: 180 cgcactaccgcgacac 195 |||||| ||||||||| Sbjct: 1118 cgcacttccgcgacac 1133
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 67.9 bits (34), Expect = 1e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 74 cagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacg 133 |||||||||||||||||||| ||||||||||| ||||| | || |||||||| || || Sbjct: 1606 cagcttatcagccactggctcaacacacatgctgtgatgaagcccttcgtgatcgctaca 1665 Query: 134 aaccggcaactcagtgtg 151 ||||| || ||||||||| Sbjct: 1666 aaccgccagctcagtgtg 1683
>gb|AY098520.1| Ananas comosus lipoxygenase I mRNA, partial cds Length = 1143 Score = 63.9 bits (32), Expect = 2e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 113 gaaccgttcgtgattgcgacgaaccggcaactcagtgtggtgcacccggtgcacaagctg 172 |||||||| || |||||||||||||| ||||| || | | | ||||| | ||||||| Sbjct: 3 gaaccgtttgttattgcgacgaaccgacaactaagcgcgcttcacccaatcaacaagctc 62 Query: 173 ctgagcccgcactaccgcgacacgttgaacatcaatgccctggc 216 || ||||||||||| ||||||||| |||| ||||||||| |||| Sbjct: 63 ctaagcccgcactatcgcgacacgatgaatatcaatgccttggc 106
>gb|BT013936.1| Lycopersicon esculentum clone 132959F, mRNA sequence Length = 2867 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgc 129 |||||||| || ||||||||| |||| ||||| |||||||||||||| || |||||||| Sbjct: 1614 catcagctcattagccactggttgaatacacacgcggtgatcgaaccatttgtgattgc 1672
>gb|U13681.1|LEU13681 Lycopersicon esculentum lipoxygenase (LOX) mRNA, complete cds Length = 2851 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgc 129 |||||||| || ||||||||| |||| ||||| |||||||||||||| || |||||||| Sbjct: 1590 catcagctcattagccactggttgaatacacacgcggtgatcgaaccatttgtgattgc 1648
>gb|U09025.1|LEU09025 Lycopersicon esculentum lipoxygenase (loxB) mRNA, complete cds Length = 2745 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaacc 117 ||||||||||| ||||||||| |||| ||||| |||||||||||||| Sbjct: 1566 catcagcttattagccactggttgaatacacacgcggtgatcgaacc 1612
>gb|DQ094169.1| Adelostemma gracillimum lipoxygenase (Lox) mRNA, complete cds Length = 2949 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcg 130 ||||||||||| ||||||||||| |||||||| ||||||||||| || | ||||| Sbjct: 1658 catcagcttattagccactggctacgaacacatgctgtgatcgaaccatttatcattgcc 1717 Query: 131 acgaaccggcaactcagtgt 150 || ||| ||||||||||||| Sbjct: 1718 acaaacaggcaactcagtgt 1737
>ref|NM_113137.2| Arabidopsis thaliana iron ion binding / lipoxygenase AT3G22400 mRNA, complete cds Length = 2922 Score = 46.1 bits (23), Expect = 0.049 Identities = 44/51 (86%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttc 121 ||||||||||| ||||| ||| || | || ||||||||||| ||||||||| Sbjct: 1686 catcagcttataagccattggttgcaaacgcatgcggtgattgaaccgttc 1736
>emb|AJ578035.1|FRX578035 Fragaria x ananassa mRNA for lipoxygenase (lox gene) Length = 2655 Score = 46.1 bits (23), Expect = 0.049 Identities = 32/35 (91%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgc 105 ||||| ||||||||||||||| ||||||| ||||| Sbjct: 1603 catcaacttatcagccactggttgaacacccatgc 1637
>gb|AF361893.2| Gossypium hirsutum bacterial-induced lipoxygenase (Lox1) mRNA, complete cds Length = 2835 Score = 46.1 bits (23), Expect = 0.049 Identities = 32/35 (91%) Strand = Plus / Plus Query: 119 ttcgtgattgcgacgaaccggcaactcagtgtggt 153 ||||||||||| |||||||| ||||| |||||||| Sbjct: 1705 ttcgtgattgcaacgaaccgacaacttagtgtggt 1739
>emb|X95666.1|STLOXC531 S.tuberosum mRNA homologous to lox gene (clone pCB531) Length = 327 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 212 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 270
>emb|X95513.1|STLIPOXT8 S.tuberosum mRNA for lipoxygenase (clone T8) Length = 2808 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 1594 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 1652
>emb|X95512.1|STLIPOXT6 S.tuberosum mRNA for lipoxygenase (clone T6) Length = 2712 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 1522 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 1580
>emb|AJ302043.1|ATH302043 Arabidopsis thaliana partial mRNA for lipoxygenase (LOX5 gene) Length = 2562 Score = 46.1 bits (23), Expect = 0.049 Identities = 44/51 (86%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgcggtgatcgaaccgttc 121 ||||||||||| ||||| ||| || | || ||||||||||| ||||||||| Sbjct: 1513 catcagcttataagccattggttgcaaacgcatgcggtgattgaaccgttc 1563
>gb|AY124318.1| Betula pendula lipoxygenase (LOX1) mRNA, partial cds Length = 698 Score = 46.1 bits (23), Expect = 0.049 Identities = 32/35 (91%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctgaacacacatgc 105 ||||||||||| ||||||||| ||||||| ||||| Sbjct: 106 catcagcttattagccactggttgaacactcatgc 140
>gb|S73865.1| linoleate:oxygen oxidoreductase [Solanum tuberosum, cv. Desiree, roots, mRNA Partial, 2718 nt] Length = 2718 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 1561 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 1619
>gb|U60201.1|STU60201 Solanum tuberosum lipoxygenase (POTLX-2) mRNA, complete cds Length = 2837 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 1614 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 1672
>gb|U60200.1|STU60200 Solanum tuberosum lipoxygenase (POTLX-1) mRNA, complete cds Length = 2772 Score = 46.1 bits (23), Expect = 0.049 Identities = 50/59 (84%) Strand = Plus / Plus Query: 93 tgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaactcagtgtg 151 |||| |||||||||||||| || || || |||||||| || ||| ||||||| |||||| Sbjct: 1577 tgaatacacatgcggtgattgagccatttgtgattgcaacaaacaggcaactaagtgtg 1635
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 44.1 bits (22), Expect = 0.19 Identities = 151/194 (77%) Strand = Plus / Plus Query: 23 atctggcagcttgccaaggcttacgcctccgtcgacgactctgcgtggcatcagcttatc 82 ||||||||||| |||||||| |||||| | || |||| || |||||||| || ||| Sbjct: 450 atctggcagctggccaaggcctacgccgctgtgaacgattccgcgtggcacggcctcatc 509 Query: 83 agccactggctgaacacacatgcggtgatcgaaccgttcgtgattgcgacgaaccggcaa 142 ||||||||||| | || || || || ||||| || |||||||| || || |||||||| Sbjct: 510 agccactggctccatacgcacgcagtcatcgagccattcgtgatcgccaccaaccggcag 569 Query: 143 ctcagtgtggtgcacccggtgcacaagctgctgagcccgcactaccgcgacacgttgaac 202 ||||| || |||||| | |||||||| || || |||||||||||||| ||| | Sbjct: 570 ctcagcgtcacgcaccccatccacaagctcttgcagccacactaccgcgacaccatgacc 629 Query: 203 atcaatgccctggc 216 ||||| |||||||| Sbjct: 630 atcaacgccctggc 643
>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence Length = 140639 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 catcagcttatcagccactgg 91 ||||||||||||||||||||| Sbjct: 48907 catcagcttatcagccactgg 48927
>gb|AY124319.1| Betula pendula lipoxygenase (LOX2) mRNA, partial cds Length = 729 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 tggcagcttgccaaggcttacgcct 50 |||||||||||||||||| |||||| Sbjct: 217 tggcagcttgccaaggctcacgcct 241
>gb|AC133210.3| Mus musculus chromosome UNK clone RP23-27L12, complete sequence Length = 210702 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tgatggccagatctggcagc 32 |||||||||||||||||||| Sbjct: 77067 tgatggccagatctggcagc 77086
>emb|AL353604.18| Human DNA sequence from clone RP5-1180C18 on chromosome 1p32.3-34.2 Contains the 3' end of a novel gene, complete sequence Length = 63397 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gcaactcagtgtggtgcacc 158 |||||||||||||||||||| Sbjct: 50676 gcaactcagtgtggtgcacc 50657
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 atctggcagcttgccaaggc 42 |||||||||||||||||||| Sbjct: 3100009 atctggcagcttgccaaggc 3100028
>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full insert sequence Length = 3008 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctg 94 |||||||| ||||||||||||||| Sbjct: 1741 catcagctcatcagccactggctg 1764
>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full insert sequence Length = 2282 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 catcagcttatcagccactggctg 94 |||||||| ||||||||||||||| Sbjct: 1040 catcagctcatcagccactggctg 1063 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,230,369 Number of Sequences: 3902068 Number of extensions: 1230369 Number of successful extensions: 19682 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 19497 Number of HSP's gapped (non-prelim): 184 length of query: 235 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 213 effective length of database: 17,147,199,772 effective search space: 3652353551436 effective search space used: 3652353551436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
