ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44h11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063817.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H08, full insert sequence Length = 1329 Score = 276 bits (139), Expect = 5e-71 Identities = 205/227 (90%) Strand = Plus / Plus Query: 145 ctccaatggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacct 204 ||||||||| |||||| || ||||| |||||||| |||||| || ||||||||| |||| Sbjct: 167 ctccaatggggaaccctcccgagctgtaccaccgcatcctcaacatccccagggagacct 226 Query: 205 cgttgcaggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagc 264 || ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| Sbjct: 227 cgccgcaggaaatccgcgccgcctacaagagcctcgtcaagaaatggcaccccgacaagc 286 Query: 265 acccgccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacg 324 |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 287 acccgccgtcctccaagcccgaggccgaggcccgcttcaaggccatcaccgaggcctacg 346 Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcggggtgtgc 371 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 347 aggcgctccttgaccagcaggagaacagggcggtgttcggggtgtgc 393
>ref|XM_463521.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 266 bits (134), Expect = 5e-68 Identities = 200/222 (90%) Strand = Plus / Plus Query: 150 atggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacctcgttg 209 |||| |||||| || ||||| |||||||| |||||| || ||||||||| |||||| | Sbjct: 1 atggggaaccctcccgagctgtaccaccgcatcctcaacatccccagggagacctcgccg 60 Query: 210 caggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagcacccg 269 |||| |||||||||| |||||| |||||| || ||||||||||||||||||||||||| Sbjct: 61 caggaaatccgcgccgcctacaagagcctcgtcaagaaatggcaccccgacaagcacccg 120 Query: 270 ccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacgaggcg 329 ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 121 ccgtcctccaagcccgaggccgaggcccgcttcaaggccatcaccgaggcctacgaggcg 180 Query: 330 ctcctggaccagcaggagaacagggcggtgttcggggtgtgc 371 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 181 ctccttgaccagcaggagaacagggcggtgttcggggtgtgc 222
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 4e-47 Identities = 162/183 (88%) Strand = Plus / Plus Query: 145 ctccaatggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacct 204 ||||||||| |||||| || ||||| |||||||| |||||| || ||||||||| |||| Sbjct: 38003066 ctccaatggggaaccctcccgagctgtaccaccgcatcctcaacatccccagggagacct 38003125 Query: 205 cgttgcaggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagc 264 || ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| Sbjct: 38003126 cgccgcaggaaatccgcgccgcctacaagagcctcgtcaagaaatggcaccccgacaagc 38003185 Query: 265 acccgccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacg 324 |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 38003186 acccgccgtcctccaagcccgaggccgaggcccgcttcaaggccatcaccgaggcctacg 38003245 Query: 325 agg 327 ||| Sbjct: 38003246 agg 38003248 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcggggtgtgc 371 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 38003336 aggcgctccttgaccagcaggagaacagggcggtgttcggggtgtgc 38003382 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctca 30 |||||||||||||||||||| Sbjct: 7619499 tctcctcctcctctttctca 7619518
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 196 bits (99), Expect = 4e-47 Identities = 162/183 (88%) Strand = Plus / Plus Query: 145 ctccaatggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacct 204 ||||||||| |||||| || ||||| |||||||| |||||| || ||||||||| |||| Sbjct: 84010 ctccaatggggaaccctcccgagctgtaccaccgcatcctcaacatccccagggagacct 84069 Query: 205 cgttgcaggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagc 264 || ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| Sbjct: 84070 cgccgcaggaaatccgcgccgcctacaagagcctcgtcaagaaatggcaccccgacaagc 84129 Query: 265 acccgccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacg 324 |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 84130 acccgccgtcctccaagcccgaggccgaggcccgcttcaaggccatcaccgaggcctacg 84189 Query: 325 agg 327 ||| Sbjct: 84190 agg 84192 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcggggtgtgc 371 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84280 aggcgctccttgaccagcaggagaacagggcggtgttcggggtgtgc 84326
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 196 bits (99), Expect = 4e-47 Identities = 162/183 (88%) Strand = Plus / Plus Query: 145 ctccaatggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacct 204 ||||||||| |||||| || ||||| |||||||| |||||| || ||||||||| |||| Sbjct: 99342 ctccaatggggaaccctcccgagctgtaccaccgcatcctcaacatccccagggagacct 99401 Query: 205 cgttgcaggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagc 264 || ||||| |||||||||| |||||| |||||| || |||||||||||||||||||| Sbjct: 99402 cgccgcaggaaatccgcgccgcctacaagagcctcgtcaagaaatggcaccccgacaagc 99461 Query: 265 acccgccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacg 324 |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99462 acccgccgtcctccaagcccgaggccgaggcccgcttcaaggccatcaccgaggcctacg 99521 Query: 325 agg 327 ||| Sbjct: 99522 agg 99524 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcggggtgtgc 371 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99612 aggcgctccttgaccagcaggagaacagggcggtgttcggggtgtgc 99658
>ref|XM_475257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 184 bits (93), Expect = 1e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 150 atggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacctcgttg 209 |||| ||||||||||||||| ||| || |||||||| || || |||||| ||| ||| | Sbjct: 1 atggggaacccgccggagctgtactacaggatcctcaacatctccagggacacgtcgccg 60 Query: 210 caggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagcacccg 269 ||| | || | || ||||||||| || | | || ||||||||||||||||||||||| Sbjct: 61 aaggagatcagggcggcgtacaagacgctggtccggcaatggcaccccgacaagcacccg 120 Query: 270 ccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacgaggcg 329 || | |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 121 ccctcctccaagaacgaggccgaggcccgcttcaaggccatcaccgaggcctacgaggcg 180 Query: 330 ctcctggaccagcaggagaacagggcggtgttcgggg 366 |||||||||||||||||||||||||||| |||||||| Sbjct: 181 ctcctggaccagcaggagaacagggcggcgttcgggg 217
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 150 atggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacctcgttg 209 |||| ||||||||||||||| ||| || |||||||| || || |||||| ||| ||| | Sbjct: 150858 atggggaacccgccggagctgtactacaggatcctcaacatctccagggacacgtcgccg 150799 Query: 210 caggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagcacccg 269 ||| | || | || ||||||||| || | | || ||||||||||||||||||||||| Sbjct: 150798 aaggagatcagggcggcgtacaagacgctggtccggcaatggcaccccgacaagcacccg 150739 Query: 270 ccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacgagg 327 || | |||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 150738 ccctcctccaagaacgaggccgaggcccgcttcaaggccatcaccgaggcctacgagg 150681 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcgggg 366 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150555 aggcgctcctggaccagcaggagaacagggcggcgttcgggg 150514
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 150 atggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacctcgttg 209 |||| ||||||||||||||| ||| || |||||||| || || |||||| ||| ||| | Sbjct: 93435 atggggaacccgccggagctgtactacaggatcctcaacatctccagggacacgtcgccg 93376 Query: 210 caggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagcacccg 269 ||| | || | || ||||||||| || | | || ||||||||||||||||||||||| Sbjct: 93375 aaggagatcagggcggcgtacaagacgctggtccggcaatggcaccccgacaagcacccg 93316 Query: 270 ccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacgagg 327 || | |||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93315 ccctcctccaagaacgaggccgaggcccgcttcaaggccatcaccgaggcctacgagg 93258 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcgggg 366 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93132 aggcgctcctggaccagcaggagaacagggcggcgttcgggg 93091
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 150 atggtgaacccgccggagctctaccaccggatcctcgacgtccccaggggcacctcgttg 209 |||| ||||||||||||||| ||| || |||||||| || || |||||| ||| ||| | Sbjct: 20837634 atggggaacccgccggagctgtactacaggatcctcaacatctccagggacacgtcgccg 20837575 Query: 210 caggggctccgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaagcacccg 269 ||| | || | || ||||||||| || | | || ||||||||||||||||||||||| Sbjct: 20837574 aaggagatcagggcggcgtacaagacgctggtccggcaatggcaccccgacaagcacccg 20837515 Query: 270 ccggcttccaagcccgaggccgaggcgcgcttcaaggccatcaccgaggcctacgagg 327 || | |||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20837514 ccctcctccaagaacgaggccgaggcccgcttcaaggccatcaccgaggcctacgagg 20837457 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 325 aggcgctcctggaccagcaggagaacagggcggtgttcgggg 366 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20837331 aggcgctcctggaccagcaggagaacagggcggcgttcgggg 20837290 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 63 caaacctatctccctccttccctcccc 89 ||||||||||||||||||||||||||| Sbjct: 6437328 caaacctatctccctccttccctcccc 6437354
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 63 caaacctatctccctccttccctcccc 89 ||||||||||||||||||||||||||| Sbjct: 139067 caaacctatctccctccttccctcccc 139093
>emb|AL133257.17| Human DNA sequence from clone RP1-166D18 on chromosome 6q22.1-22.33 Contains part of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 130748 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctct 36 ||||||||||||||||||||||||||| Sbjct: 61678 ctctcctcctcctctttctcatcctct 61652
>ref|XM_530901.1| PREDICTED: Pan troglodytes LOC462448 (LOC462448), mRNA Length = 858 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 ||||||||||||||||||||||||| Sbjct: 815 ctcctcctcctctttctcatcctct 791
>ref|XM_866118.1| PREDICTED: Bos taurus similar to Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (LOC614570), mRNA Length = 696 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 ||||||||||||||||||||||||| Sbjct: 81 ctcctcctcctctttctcatcctct 57
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 ||||||||||||||||||||||||| Sbjct: 84889 ctcctcctcctctttctcatcctct 84865 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcctcctcctctttctcatcctct 36 ||||||||||||||||| |||||| Sbjct: 84969 tcctcctcctctttctcttcctct 84946
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 ||||||||||||||||||||||||| Sbjct: 82967 ctcctcctcctctttctcatcctct 82991 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcctct 36 ||||||||||||||||| |||||| Sbjct: 82887 tcctcctcctctttctcttcctct 82910
>gb|AC163669.2| Mus musculus BAC clone RP23-29H1 from chromosome 12, complete sequence Length = 173903 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 67 cctatctccctccttccctcccct 90 |||||||||||||||||||||||| Sbjct: 4997 cctatctccctccttccctcccct 5020
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctctct 38 ||||||||||||||||||| |||||||| Sbjct: 150207 tctcctcctcctctttctcctcctctct 150180 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 150309 tctcctcctcctctttctcctcctct 150284 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 150084 tctcctcctcctctttctcctcctc 150060 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 150048 tctcctcctcctctttctcctcctc 150024 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 150012 tctcctcctcctctttctcctcctc 149988 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 149976 tctcctcctcctctttctcctcctc 149952 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 149925 tctcctcctcctctttctcctcctc 149901 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 150341 ctcctcctcctctttctcctcctc 150318 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 150260 ctcctcctcctctttctcctcctc 150237 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 150242 ctcctcctcctctttctcctcctc 150219 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 150137 ctcctcctcctctttctcctcctc 150114 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 150119 ctcctcctcctctttctcctcctc 150096 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 149957 ctcctcctcctctttctcctcctc 149934
>emb|CR974575.8| Mouse DNA sequence from clone RP23-77K24 on chromosome 12, complete sequence Length = 221107 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 67 cctatctccctccttccctcccct 90 |||||||||||||||||||||||| Sbjct: 13409 cctatctccctccttccctcccct 13386
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctctct 38 ||||||||||||||||||| |||||||| Sbjct: 127367 tctcctcctcctctttctcctcctctct 127340 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 127469 tctcctcctcctctttctcctcctct 127444 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 127244 tctcctcctcctctttctcctcctc 127220 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 127208 tctcctcctcctctttctcctcctc 127184 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 127172 tctcctcctcctctttctcctcctc 127148 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 127136 tctcctcctcctctttctcctcctc 127112 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 127085 tctcctcctcctctttctcctcctc 127061 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127501 ctcctcctcctctttctcctcctc 127478 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127420 ctcctcctcctctttctcctcctc 127397 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127402 ctcctcctcctctttctcctcctc 127379 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127297 ctcctcctcctctttctcctcctc 127274 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127279 ctcctcctcctctttctcctcctc 127256 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 127117 ctcctcctcctctttctcctcctc 127094
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 286 aggccgaggcgcgcttcaaggccatcaccgaggcctacga 325 ||||||||||||||||||||| || ||||||||||||| Sbjct: 5200072 aggccgaggcgcgcttcaaggaggtctccgaggcctacga 5200111
>gb|AC127691.4| Mus musculus BAC clone RP24-216M10 from 9, complete sequence Length = 153242 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcctct 36 |||||||||||||||||||||||| Sbjct: 45382 tcctcctcctctttctcatcctct 45405 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcctct 36 ||||||||||||||||| |||||| Sbjct: 45346 tcctcctcctctttctcttcctct 45369
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence Length = 219234 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 4 tttccgctctcctcctcctctttctcatcctc 35 |||||||||||||||||||||| ||| ||||| Sbjct: 133250 tttccgctctcctcctcctcttcctcctcctc 133219
>gb|AC133586.12| Mus musculus chromosome 15, clone RP24-456H16, complete sequence Length = 149834 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctct 36 |||||||||||||||||||| |||||| Sbjct: 77089 ctctcctcctcctctttctcctcctct 77115
>gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170181 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 62 tcaaacctatctccctccttccctccc 88 |||||||| |||||||||||||||||| Sbjct: 71555 tcaaacctctctccctccttccctccc 71529
>gb|AC112147.5| Mus musculus BAC clone RP23-175E16 from 9, complete sequence Length = 202928 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctctc 37 ||||||||||||| ||||||||||||| Sbjct: 47923 tctcctcctcctccttctcatcctctc 47949
>emb|CR925724.6| Zebrafish DNA sequence from clone RP71-42E3 in linkage group 16, complete sequence Length = 76437 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 13 tcctcctcctctttctcatcctctctg 39 ||||||||||||| ||||||||||||| Sbjct: 2328 tcctcctcctcttcctcatcctctctg 2302
>gb|AC117461.3| Homo sapiens 3 BAC RP11-346H19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154870 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 tcaaacctatctccctccttccctccc 88 |||||||| |||||||||||||||||| Sbjct: 153383 tcaaacctctctccctccttccctccc 153409
>gb|AC155259.1| Mus musculus BAC clone RP24-70C15 from 9, complete sequence Length = 222729 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 67 cctatctccctccttccctcccc 89 ||||||||||||||||||||||| Sbjct: 85646 cctatctccctccttccctcccc 85668
>gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosome 13, complete sequence Length = 193103 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 ctatctccctccttccctcccct 90 ||||||||||||||||||||||| Sbjct: 130562 ctatctccctccttccctcccct 130584
>gb|AC136021.5| Mus musculus BAC clone RP24-473P10 from 9, complete sequence Length = 171139 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctct 38 |||||||||||||||||| |||||||| Sbjct: 86368 ctcctcctcctctttctcttcctctct 86394
>emb|AL672267.10| Mouse DNA sequence from clone RP23-377K9 on chromosome X, complete sequence Length = 169331 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctct 38 |||||||||||||||||| |||||||| Sbjct: 134882 ctcctcctcctctttctcctcctctct 134908
>gb|AC100600.22| Mus musculus chromosome 9, clone RP23-157H17, complete sequence Length = 225538 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcct 34 |||||||||||||||||||||| Sbjct: 161717 tcctcctcctctttctcatcct 161738 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 175115 ctcctcctcctctttctcctcctct 175139
>gb|AC118606.13| Mus musculus chromosome 5, clone RP24-69F9, complete sequence Length = 208384 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 43831 tctcctcctcctctttctcttcctct 43806
>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence Length = 235557 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 209453 tctcctcctcctctttctcctcctct 209478
>ref|NM_053199.3| Mus musculus immunoglobulin superfamily, member 4B (Igsf4b), mRNA Length = 4159 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 90 cggcttccaagcccggggccgaggcg 65
>gb|AC126937.3| Mus musculus BAC clone RP24-250G8 from chromosome 17, complete sequence Length = 150579 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 49640 ctcctcctcctctttctcctcctctc 49615
>gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome 5, complete sequence Length = 176338 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 130481 ctctcctcctcctctttctcctcctc 130506
>ref|XM_756021.1| Ustilago maydis 521 hypothetical protein (UM04967.1) partial mRNA Length = 2064 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cttcaaggccatcaccgaggcc 320 |||||||||||||||||||||| Sbjct: 693 cttcaaggccatcaccgaggcc 714
>emb|CT025652.7| Mouse DNA sequence from clone RP24-68J3 on chromosome 17, complete sequence Length = 226856 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 220916 ctcctcctcctctttctcctcctctc 220941
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 cctatctccctccttccctccc 88 |||||||||||||||||||||| Sbjct: 134221 cctatctccctccttccctccc 134242
>gb|AC124485.3| Mus musculus BAC clone RP23-450J12 from chromosome 8, complete sequence Length = 198254 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 193239 tctcctcctcctctttctcctcctct 193264
>gb|AC125077.4| Mus musculus BAC clone RP23-473K6 from chromosome 6, complete sequence Length = 184783 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 68405 tctcctcctcctctttctcttcctct 68380 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 68437 ctcctcctcctctttctcctcctc 68414
>emb|CR956396.6| Pig DNA sequence from clone CH242-205N12 on chromosome 7, complete sequence Length = 175108 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 ccgctctcctcctcctctttct 28 |||||||||||||||||||||| Sbjct: 76846 ccgctctcctcctcctctttct 76867
>gb|AC107750.9| Mus musculus chromosome 13, clone RP23-249C3, complete sequence Length = 220740 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 97651 tctcctcctcctctttctcctcctct 97626
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ctctctgccactaaccacctcc 54 |||||||||||||||||||||| Sbjct: 111061 ctctctgccactaaccacctcc 111082
>gb|AC160106.2| Mus musculus BAC clone RP24-300H23 from chromosome 13, complete sequence Length = 184364 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 43280 ctctcctcctcctctttctcctcctc 43255
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 120561 ctctcctcctcctctttctcctcctc 120536
>emb|Z97832.11|HS329A5 Human DNA sequence from clone RP3-329A5 on chromosome 6p21.1-21.33 Contains the gene for a novel EGF-like and CUB domain protein similar to mouse CUB domain EGF-like signal peptide 1 (Scube1) and mouse and human CEGP1, the ZNF76 gene for zinc finger protein 76 (expressed in testis), the DEF6 gene for differentially expressed in FDCP 6 homolog (mouse), a ribosomal protein L35A (RPL35A) pseudogene and three CpG islands, complete sequence Length = 117026 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 5023 ctcctcctcctctttctcctcctctc 4998
>gb|AF195662.1| Mus musculus nectin-like protein 1 (Necl1) mRNA, complete cds Length = 2377 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 34 cggcttccaagcccggggccgaggcg 9
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 102399 ctcctcctcctctttctcctcctctc 102424
>gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosome 14, complete sequence Length = 191733 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 95662 ctctcctcctcctctttctcctcctc 95687 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 95712 ctcctcctcctctttctcctcctc 95735 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 95694 ctcctcctcctctttctcctcctc 95717
>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence Length = 202933 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 162133 ctctcctcctcctctttctcctcctc 162108
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||| ||||||||||||| Sbjct: 158344 ctcctcctcctccttctcatcctctc 158319
>gb|AC023693.4| Drosophila melanogaster X BAC RP98-17B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164969 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||| ||||||||||||| Sbjct: 62998 ctcctcctcctccttctcatcctctc 62973
>tpg|BK003106.1| TPA: TPA_inf: Drosophila melanogaster HDC18361 (HDC18361) gene, complete cds Length = 255 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||| ||||||||||||| Sbjct: 219 ctcctcctcctccttctcatcctctc 194
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||| ||||||||||| Sbjct: 119056 ctcctcctcctcttcctcatcctctc 119031
>gb|AC010754.10| Homo sapiens chromosome 18, clone RP11-403A21, complete sequence Length = 189752 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctctgcc 41 ||||||||| ||||||||||||||| |||| Sbjct: 93071 ctcctcctcatctttctcatcctctgtgcc 93042
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 1890 ctctcctcctcctctttctcctcctc 1865
>gb|AC154590.2| Mus musculus BAC clone RP23-368L2 from chromosome 14, complete sequence Length = 168428 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 703 ctctcctcctcctctttctcctcctc 678 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 671 ctcctcctcctctttctcctcctc 648 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 653 ctcctcctcctctttctcctcctc 630
>dbj|AK036352.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630060A02 product:nectin-lke 1, full insert sequence Length = 2748 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 44 cggcttccaagcccggggccgaggcg 19
>gb|AC158515.2| Mus musculus BAC clone RP24-487D11 from chromosome 9, complete sequence Length = 176590 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||| |||||||||| Sbjct: 89756 tctcctcctcctcttcctcatcctct 89731
>dbj|AK038917.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230075C17 product:nectin-lke 1, full insert sequence Length = 1623 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 47 cggcttccaagcccggggccgaggcg 22
>gb|BC079837.1| Mus musculus immunoglobulin superfamily, member 4B, mRNA (cDNA clone IMAGE:6815634) Length = 2917 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 28 cggcttccaagcccggggccgaggcg 3
>dbj|AK053077.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930044J03 product:nectin-lke 1, full insert sequence Length = 4113 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 44 cggcttccaagcccggggccgaggcg 19
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 20055 ctcctcctcctctttctcctcctctc 20080
>ref|XM_341157.2| PREDICTED: Rattus norvegicus immunoglobulin superfamily, member 4B (predicted) (Igsf4b_predicted), mRNA Length = 2687 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 231 cggcttccaagcccggggccgaggcg 206
>gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-85a8, complete sequence Length = 236834 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cggcttccaagcccgaggccgaggcg 296 ||||||||||||||| |||||||||| Sbjct: 59288 cggcttccaagcccggggccgaggcg 59313
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 60666 ctctcctcctcctctttctcctcctc 60691 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 60776 ctcctcctcctctttctcgtcctc 60799 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 60758 ctcctcctcctctttctcctcctc 60781 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 60689 ctcctcctcctctttctcctcctc 60712
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 87757 tctcctcctcctctttctcctcctct 87732 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 86406 tctcctcctcctctttctcctcctct 86381 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 87256 tctcctcctcctctttctcctcctc 87232
>emb|AL928805.18| Mouse DNA sequence from clone RP23-291H20 on chromosome 2, complete sequence Length = 192688 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||| ||||||||| Sbjct: 149964 ctctcctcctcctcttcctcatcctc 149939
>gb|AC154862.2| Mus musculus BAC clone RP23-8G7 from 13, complete sequence Length = 205028 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 174115 ctctcctcctcctctttctcttcctc 174090
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||| ||||||||||||| Sbjct: 213395 ctcctcctcctccttctcatcctctc 213370
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 23824 tctcctcctcctctttctcctcctct 23849
>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete sequence Length = 199574 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 192912 ctctcctcctcctctttctcttcctc 192937
>emb|CT010509.10| Mouse DNA sequence from clone RP23-63E8 on chromosome 9, complete sequence Length = 258170 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||| |||||||||| Sbjct: 45653 tctcctcctcctcttcctcatcctct 45678
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 ctctctgccactaaccacctcc 54 |||||||||||||||||||||| Sbjct: 37069 ctctctgccactaaccacctcc 37048
>emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chromosome 17, complete sequence Length = 190153 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctctc 37 |||||||||||||||||| ||||||| Sbjct: 91103 ctcctcctcctctttctcctcctctc 91128
>gb|AC153841.1| Mus musculus 6 BAC RP23-260M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190541 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 cctatctccctccttccctccc 88 |||||||||||||||||||||| Sbjct: 96565 cctatctccctccttccctccc 96544
>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete sequence Length = 211585 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 160609 tctcctcctcctctttctcctcctct 160634
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 54773 ctctcctcctcctctttctcctcctc 54748
>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete sequence Length = 181805 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 121063 tctcctcctcctctttctcctcctct 121038
>emb|AL672067.5| Mouse DNA sequence from clone RP23-5P1 on chromosome X, complete sequence Length = 225196 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 133777 ctctcctcctcctctttctcctcctc 133802
>emb|AL845162.9| Mouse DNA sequence from clone RP23-35I8 on chromosome 2, complete sequence Length = 189829 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctc 35 |||||||||||||||||||| ||||| Sbjct: 56167 ctctcctcctcctctttctcttcctc 56142
>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence Length = 222981 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctct 36 ||||||||||||||||||| |||||| Sbjct: 8869 tctcctcctcctctttctcctcctct 8894
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||| ||||||||||| Sbjct: 177330 tctcctcctcctccttctcatcctc 177306
>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence Length = 218177 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 175464 tctcctcctcctctttctcctcctc 175488
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 4131 ctcctcctcctctttctcttcctct 4107
>gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, complete sequence Length = 192877 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctctct 38 ||||||||||| |||||||| |||||||| Sbjct: 60188 ctctcctcctcttctttctcttcctctct 60160
>gb|AC156952.22| Mus musculus 10 BAC RP24-385D2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179140 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 122538 ctcctcctcctctttctcctcctct 122562
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 110619 tctcctcctcctctttctcctcctc 110595 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 110714 ctcctcctcctctttctcctcctc 110691 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 110633 ctcctcctcctctttctcctcctc 110610 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 110525 ctcctcctcctctttctcctcctc 110502 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 110507 ctcctcctcctctttctcctcctc 110484 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 110489 ctcctcctcctctttctcctcctc 110466
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 168473 tctcctcctcctctttctcctcctc 168497
>ref|NM_192701.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 219 cgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaag 263 |||||||||||| | ||||||||| ||| |||||||| |||||| Sbjct: 94 cgcgccgcgtaccaccgcctcgccatgaagtggcacccggacaag 138
>gb|AC163447.5| Mus musculus chromosome 7, clone RP24-314E16, complete sequence Length = 135851 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||| ||||||||||| Sbjct: 10071 tctcctcctcctccttctcatcctc 10047
>gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, complete sequence Length = 179337 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 90612 ctcctcctcctcttcctcatcctct 90588
>gb|AC134605.5| Mus musculus BAC clone RP23-42E17 from chromosome 14, complete sequence Length = 216097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 33141 ctcctcctcctctttctcctcctct 33165
>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence Length = 206456 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 136572 tctcctcctcctctttctcctcctc 136596
>gb|AC165970.3| Mus musculus BAC clone RP23-129J20 from chromosome 6, complete sequence Length = 207303 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 78420 ctcctcctcctctttctcctcctct 78396 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 78574 ctcctcctcctctttctcctcctc 78551
>gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome 9, complete sequence Length = 178690 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 166042 ctcctcctcctccttctcatcctct 166018
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctctctgc 40 |||||| |||||||||||||| ||||||| Sbjct: 109876 ctcctcttcctctttctcatcttctctgc 109848
>gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, complete sequence Length = 181769 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 71465 tctcctcctcctctttctcgtcctc 71489
>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence Length = 138043 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 106931 ctcctcctcctccttctcatcctct 106955
>gb|AC133583.13| Mus musculus chromosome 12, clone RP24-444A9, complete sequence Length = 123042 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 120262 ctcctcctcctctttctcctcctct 120286
>gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, complete sequence Length = 218109 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 86229 ctcctcctcctctttctcttcctct 86205
>ref|XM_868496.1| PREDICTED: Bos taurus similar to eukaryotic translation initiation factor 4e 1a (LOC616465), mRNA Length = 423 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcctcctctttctcatcctct 36 ||||||||||||||||||||| Sbjct: 77 tcctcctctttctcatcctct 57
>ref|XM_613602.2| PREDICTED: Bos taurus similar to serine/arginine repetitive matrix 2 (LOC534002), mRNA Length = 1111 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 405 ctcctcctcctcttcctcatcctct 429
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gcgcgcttcaaggccatcaccgaggccta 322 |||||||||||||| |||| ||||||||| Sbjct: 2169313 gcgcgcttcaaggcgatcaacgaggccta 2169341
>gb|AC139060.5| Mus musculus chromosome 16, clone RP23-58G17, complete sequence Length = 196065 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 85289 tctcctcctcctctttctcctcctc 85265
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 13191 ctcctcctcctctttctcctcctct 13167
>gb|AC139568.5| Mus musculus chromosome 12, clone RP23-208G5, complete sequence Length = 202882 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 167755 tctcctcctcctctttctcctcctc 167731
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 66308 tctcctcctcctctttctcctcctc 66284
>gb|AC125461.4| Mus musculus BAC clone RP23-62K10 from chromosome 3, complete sequence Length = 201415 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 144285 ctcctcctcctctttctcctcctct 144309
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 209556 ctcctcctcctctttctcttcctct 209532
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 8913 tctcctcctcctctttctcctcctc 8889
>gb|AC132570.3| Mus musculus BAC clone RP24-531D1 from chromosome 5, complete sequence Length = 183005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ctatctccctccttccctccc 88 ||||||||||||||||||||| Sbjct: 110628 ctatctccctccttccctccc 110648
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 75886 ctcctcctcctctttctcctcctct 75862
>gb|AC147082.2| Mus musculus BAC clone RP23-321E5 from chromosome 9, complete sequence Length = 202957 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 107596 ctcctcctcctctttctcctcctct 107572
>gb|AC120418.10| Mus musculus chromosome 6, clone RP24-474I24, complete sequence Length = 177307 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ctatctccctccttccctccc 88 ||||||||||||||||||||| Sbjct: 84912 ctatctccctccttccctccc 84932
>gb|AY576613.1| Macrobdella decora microsatellite MfF06 sequence Length = 479 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 417 ctcctcctcctcttcctcatcctct 393
>gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, complete sequence Length = 214848 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccacctccctctgcatcaaac 67 ||||||||||||||||||||| Sbjct: 170053 ccacctccctctgcatcaaac 170033
>gb|AC166829.3| Mus musculus BAC clone RP23-299M19 from chromosome 1, complete sequence Length = 211292 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 18166 ctcctcctcctctttctcttcctct 18142
>gb|AC154597.2| Mus musculus BAC clone RP23-355G2 from chromosome 14, complete sequence Length = 201544 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tctccctccttccctcccctg 91 ||||||||||||||||||||| Sbjct: 198213 tctccctccttccctcccctg 198233
>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence Length = 221001 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctctct 38 |||||||||||||||| ||| |||||||| Sbjct: 139616 ctctcctcctcctcttcctcctcctctct 139644
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cctatctccctccttccctcc 87 ||||||||||||||||||||| Sbjct: 75023 cctatctccctccttccctcc 75003
>gb|AC155230.2| Mus musculus BAC clone RP24-335J14 from chromosome 12, complete sequence Length = 135049 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 94745 ctcctcctcctctttctcctcctct 94769
>ref|XM_900336.2| PREDICTED: Mus musculus hypothetical LOC628080 (LOC628080), mRNA Length = 303 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 81 ctcctcctcctctttctcctcctct 57
>gb|AC100539.12| Mus musculus chromosome 1, clone RP23-152E3, complete sequence Length = 225993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 102427 ctcctcctcctctttctcctcctct 102451
>gb|AC113311.9| Mus musculus chromosome 1, clone RP23-440J24, complete sequence Length = 260120 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 ||||| ||||||||||||||||||| Sbjct: 79056 ctccttctcctctttctcatcctct 79080
>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence Length = 275200 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 8926 ctcctcctcctctttctcctcctct 8902
>gb|AC145398.2| Rattus norvegicus chromosome 1 clone RP32-604H24 map q35-q36, complete sequence Length = 165235 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctctct 38 |||||||||||||||| ||| |||||||| Sbjct: 130477 ctctcctcctcctcttcctcctcctctct 130505
>gb|AC145397.1| Rattus norvegicus chromosome 1 clone RP32-96B07 map q35-q36, complete sequence Length = 156967 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctctct 38 |||||||||||||||| ||| |||||||| Sbjct: 90230 ctctcctcctcctcttcctcctcctctct 90258
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete sequence Length = 182085 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 110800 ctcctcctcctctttctcttcctct 110776 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcctcctcctctttctcatcctct 36 ||||||||||||||||| |||||| Sbjct: 110706 tcctcctcctctttctcttcctct 110683
>gb|DQ483450.1| Gymnogyps californianus clone 9D microsatellite sequence Length = 408 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 146 ctcctcctcctccttctcatcctct 122
>gb|DQ483977.1| Gymnogyps californianus clone 143G microsatellite sequence Length = 406 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 147 ctcctcctcctccttctcatcctct 123
>gb|DQ483917.1| Gymnogyps californianus clone 83G microsatellite sequence Length = 403 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 257 ctcctcctcctccttctcatcctct 281
>gb|DQ483843.1| Gymnogyps californianus clone 9G microsatellite sequence Length = 406 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 147 ctcctcctcctccttctcatcctct 123
>gb|DQ483405.1| Gymnogyps californianus clone 108H microsatellite sequence Length = 406 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 147 ctcctcctcctccttctcatcctct 123
>gb|DQ483207.1| Gymnogyps californianus clone 99A microsatellite sequence Length = 413 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 147 ctcctcctcctccttctcatcctct 123
>emb|CT009607.7| Mouse DNA sequence from clone RP23-134I10 on chromosome 17, complete sequence Length = 195995 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 110879 ctcctcctcctctttctcctcctct 110855
>gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosome 6, complete sequence Length = 162905 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 16680 tctcctcctcctctttctcctcctc 16656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 16665 tctcctcctcctctttctcctcctc 16641
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 62229 ctcctcctcctctttctcttcctct 62205
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 78934 ctcctcctcctctttctcctcctct 78958
>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence Length = 216199 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 190381 ctcctcctcctctttctcctcctct 190357
>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence Length = 192806 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 43111 ctcctcctcctctttctcttcctct 43087
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 217047 ctcctcctcctctttctcctcctct 217023
>gb|AC133204.3| Mus musculus BAC clone RP23-106N3 from chromosome 5, complete sequence Length = 224181 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 24606 ctcctcctcctctttctcctcctct 24630
>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence Length = 191669 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 86742 ctcctcctcctctttctcctcctct 86766
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence Length = 165103 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 133988 ctcctcctcctctttctcctcctct 133964
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 171867 ctcctcctcctctttctcctcctct 171843
>gb|AC124400.4| Mus musculus BAC clone RP24-357O21 from chromosome 14, complete sequence Length = 191219 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tctccctccttccctcccctg 91 ||||||||||||||||||||| Sbjct: 55687 tctccctccttccctcccctg 55707
>gb|AC122029.4| Mus musculus BAC clone RP24-400A11 from chromosome 12, complete sequence Length = 139357 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 43751 tctcctcctcctctttctcctcctc 43727
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 155221 ctcctcctcctctttctcctcctct 155245
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 116535 ctcctcctcctctttctcttcctct 116511
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 138779 ctcctcctcctctttctcctcctct 138803
>gb|AC114004.5| Mus musculus BAC clone RP23-174P2 from 7, complete sequence Length = 187196 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 107159 tctcctcctcctctttctcctcctc 107135 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 107173 ctcctcctcctctttctcctcctc 107150
>gb|AC124531.5| Mus musculus BAC clone RP23-299D2 from 7, complete sequence Length = 191228 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 87954 tctcctcctcctctttctcctcctc 87930 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 87968 ctcctcctcctctttctcctcctc 87945
>gb|AC116567.5| Mus musculus BAC clone RP23-1M9 from 5, complete sequence Length = 206570 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 137299 ctcctcctcctctttctcctcctct 137275
>gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, complete sequence Length = 171990 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccacctccctctgcatcaaac 67 ||||||||||||||||||||| Sbjct: 141181 ccacctccctctgcatcaaac 141201
>gb|AC121925.2| Mus musculus BAC clone RP24-201D17 from 6, complete sequence Length = 180015 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 104242 ctcctcctcctctttctcctcctct 104266
>gb|AC130202.1| Mus musculus BAC clone RP24-480M3 from 9, complete sequence Length = 178779 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 49692 ctcctcctcctctttctcctcctct 49668
>gb|AC122289.2| Mus musculus BAC clone RP23-254F12 from 3, complete sequence Length = 210708 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 192801 ctcctcctcctctttctcctcctct 192825
>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence Length = 203014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 177116 tctcctcctcctctttctcctcctc 177140
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 26127 ctcctcctcctcttgctcatcctct 26151
>gb|AC108419.7| Mus musculus chromosome 1, clone RP23-210C21, complete sequence Length = 212445 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||| ||||||||| Sbjct: 21074 tctcctcctcctcttcctcatcctc 21098
>gb|AC099609.8| Mus musculus chromosome 7, clone RP23-376D24, complete sequence Length = 226284 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcc 33 ||||||||||||||||||||| Sbjct: 100251 tcctcctcctctttctcatcc 100271
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 144607 tctcctcctcctctttctcctcctc 144583
>gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, complete sequence Length = 270063 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 141280 tctcctcctcctctttctcctcctc 141256
>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence Length = 197540 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 88337 ctcctcctcctctttctcctcctct 88361
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 74738 ctcctcctcctctttctcctcctct 74762
>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence Length = 165789 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 126356 ctcctcctcctctttctcctcctct 126332 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 126287 tctcctcctcctctttctcctcctc 126263
>gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, complete sequence Length = 240699 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 72 ctccctccttccctcccctgtttctcgct 100 |||||||| |||||||||||| ||||||| Sbjct: 5776 ctccctccctccctcccctgtctctcgct 5804
>gb|AC144704.2| Danio rerio clone CH211-152I13, complete sequence Length = 35729 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gctctcctcctcctctttctc 29 ||||||||||||||||||||| Sbjct: 20160 gctctcctcctcctctttctc 20140
>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17, complete sequence Length = 202430 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 68748 tctcctcctcctctttctcctcctc 68772
>gb|AC162933.2| Mus musculus BAC clone RP23-148J22 from chromosome 12, complete sequence Length = 236972 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcctctct 38 |||||||||||||||| ||| |||||||| Sbjct: 114002 ctctcctcctcctcttcctcctcctctct 113974
>ref|XM_501190.1| Yarrowia lipolytica CLIB122, YALI0B21626g predicted mRNA Length = 3594 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 1737 ctcctcctcctctttctcctcctct 1713
>emb|AL358492.19| Human DNA sequence from clone RP11-340B24 on chromosome 1 Contains a heat shock 10kDa protein 1 (chaperonin 10) (HSPE1) pseudogene, the gene for a novel protein (FLJ37118, FLJ37833) and a cofilin 1 (non-muscle) (CFL1) pseudogene, complete sequence Length = 135992 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ctcctcctctttctcatcctctctg 39 ||||||||||||||| ||||||||| Sbjct: 106138 ctcctcctctttctcttcctctctg 106114
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 181144 tctcctcctcctctttctcctcctc 181168
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence Length = 228883 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||| ||||||||| Sbjct: 52308 tctcctcctcctcttcctcatcctc 52332
>emb|AL353152.8| Human DNA sequence from clone RP11-359N11 on chromosome 6 Contains two novel genes (including FLJ32264) and a CpG island, complete sequence Length = 119416 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 81991 ctcctcctcctctttctcgtcctct 82015 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 63925 ctcctcctcctctttctcctcctc 63902
>gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, complete sequence Length = 185324 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||| ||||||||||| Sbjct: 6282 tctcctcctcctccttctcatcctc 6306
>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research Institute) complete sequence Length = 215638 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctca 30 ||||||||||||||||||||| Sbjct: 181866 ctctcctcctcctctttctca 181886
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 aggccatcaccgaggcctacg 324 ||||||||||||||||||||| Sbjct: 1267005 aggccatcaccgaggcctacg 1266985
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 74766 ctcctcctcctctttctcctcctct 74742
>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4 Length = 277703 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 173708 tctcctcctcctctttctcctcctc 173732
>emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chromosome 11 Contains two novel genes, the 3' end of the Egfr gene for epidermal growth factor receptor and the gene for a novel F-box domain containing protein, complete sequence Length = 161348 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 135407 ctcctcctcctctttctcctcctct 135383
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the 3' end of the Col23a1 gene for procollagen (type XXIII, alpha 1), the 5' end of a novel gene and a CpG island, complete sequence Length = 155917 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 tccttccctcccctgtttctc 97 ||||||||||||||||||||| Sbjct: 66493 tccttccctcccctgtttctc 66473
>gb|AC122371.4| Mus musculus BAC clone RP23-459C10 from chromosome 13, complete sequence Length = 177577 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 61111 ctcctcctcctctttctcgtcctct 61135
>emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chromosome 11, complete sequence Length = 116014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 51324 tctcctcctcctctttctcctcctc 51348
>emb|AL645799.5| Mouse DNA sequence from clone RP23-459O24 on chromosome 13, complete sequence Length = 63170 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 1352 ctcctcctcctctttctcctcctct 1376
>emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chromosome 13, complete sequence Length = 202855 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 202207 ctcctcctcctctttctcctcctct 202231
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 gcgcttcaaggccatcaccgaggcc 320 ||||||||||||||||| ||||||| Sbjct: 1553208 gcgcttcaaggccatcaacgaggcc 1553184
>gb|AC114408.18| Mus musculus chromosome 5, clone RP23-51J22, complete sequence Length = 230044 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 tccctccttccctcccctgtttctc 97 |||||||||||||||||||| |||| Sbjct: 91819 tccctccttccctcccctgtctctc 91843
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 86910 ctcctcctcctctttctcctcctct 86934
>gb|AC068075.16| Homo sapiens chromosome 8, clone RP11-756K15, complete sequence Length = 150900 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 148674 ctcctcctcctctttctcctcctct 148698
>gb|AC087530.8| Homo sapiens chromosome 17, clone RP11-313F15, complete sequence Length = 170507 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 156345 tctcctcctcctctttctcttcctc 156321
>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences Length = 198405 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 166432 tctcctcctcctctttctcctcctc 166456
>gb|AC090796.13| Homo sapiens chromosome 8, clone RP11-246K15, complete sequence Length = 168055 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 113199 ctcctcctcctctttctcctcctct 113175
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 19452705 tctcctcctcctctttctcctcctc 19452729
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 115263 tctcctcctcctctttctcctcctc 115287 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 116623 ctcctcctcctctttctcctcctc 116646 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 116484 ctcctcctcctctttctcctcctc 116507
>dbj|AK137433.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630059B11 product:hypothetical Helix-turn-helix, Fis-type/Proline-rich region profile containing protein, full insert sequence Length = 2283 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 410 ctcctcctcctctttctcctcctct 434
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctctctg 39 ||||||||||||| ||||| ||||||||| Sbjct: 4345 tctcctcctcctccttctcctcctctctg 4317
>gb|AC092417.2| Homo sapiens chromosome 3 clone RP11-90M23, complete sequence Length = 167263 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 152740 tctcctcctcctctttctcctcctc 152716 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 152754 ctcctcctcctctttctcctcctc 152731 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 152721 ctcctcctcctctttctcctcctc 152698
>gb|AC159200.2| Mus musculus BAC clone RP23-366K13 from chromosome 16, complete sequence Length = 143881 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 26710 ctcctcctcctctttctcctcctct 26734
>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete sequence Length = 278310 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 253059 ctcctcctcctctttctcctcctct 253083
>gb|AC154253.2| Mus musculus BAC clone RP24-201F24 from chromosome 14, complete sequence Length = 161496 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 8125 ctcctcctcctctttctcctcctct 8101
>gb|AC025270.6| Homo sapiens chromosome 15 clone CTD-2165P21 map 15q15, complete sequence Length = 128484 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||| ||||||||||| Sbjct: 107670 tctcctcctcctccttctcatcctc 107694
>gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map 15q15, complete sequence Length = 199503 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||| ||||||||||| Sbjct: 20435 tctcctcctcctccttctcatcctc 20459
>ref|XM_627833.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_5110), partial mRNA Length = 8136 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 6929 tctcctcctcctctttctcctcctc 6905
>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete sequence Length = 192031 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 27666 ctcctcctcctctttctcttcctct 27690
>gb|AC133012.5| Homo sapiens chromosome 17, clone RP11-582A10, complete sequence Length = 153014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 15846 tctcctcctcctctttctcttcctc 15870
>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence Length = 230018 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 7204 tctcctcctcctctttctcctcctc 7228
>gb|AC155815.2| Mus musculus BAC clone RP24-135C18 from chromosome 12, complete sequence Length = 181303 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 146134 ctcctcctcctctttctcctcctct 146110
>gb|AC158999.2| Mus musculus BAC clone RP24-201N16 from chromosome 9, complete sequence Length = 169860 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||| |||||||||||| Sbjct: 87347 ctcctcctcctccttctcatcctct 87323
>gb|AC125145.3| Mus musculus BAC clone RP24-347B7 from chromosome 6, complete sequence Length = 186598 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 134241 ctcctcctcctctttctcctcctct 134217 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 134395 ctcctcctcctctttctcctcctc 134372
>gb|AC158403.4| Mus musculus chromosome 3, clone RP24-211L17, complete sequence Length = 156964 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 55725 tctcctcctcctctttctcctcctc 55701
>dbj|AK079723.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430034G17 product:beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I), full insert sequence Length = 2958 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 1172 ctcctcctcctctttctcctcctct 1196
>ref|NM_001015808.1| Xenopus tropicalis MGC97552 protein (MGC97552), mRNA Length = 3635 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 |||| |||||||||||||||||||| Sbjct: 3137 tctcatcctcctctttctcatcctc 3113 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tcctcctctttctcatcctc 35 |||||||||||||||||||| Sbjct: 3087 tcctcctctttctcatcctc 3068
>dbj|AK038309.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130094O18 product:hypothetical protein, full insert sequence Length = 2629 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 1598 ctcctcctcctctttctcctcctct 1574
>dbj|AK048428.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130060B16 product:beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I), full insert sequence Length = 1415 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 872 ctcctcctcctctttctcctcctct 896
>gb|AC153548.4| Mus musculus 10 BAC RP23-356G7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194511 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||| ||||||||| Sbjct: 91492 tctcctcctcctcttcctcatcctc 91468
>gb|AF187873.1|AF187873 Cavia porcellus inwardly-rectifying potassium channel Kir2.2 (KCNJ12) gene, complete cds Length = 9642 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 2886 ctcctcctcctctttctcctcctct 2862
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 ttcaaggccatcaccgaggcc 320 ||||||||||||||||||||| Sbjct: 24219490 ttcaaggccatcaccgaggcc 24219470
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ttcaaggccatcaccgaggcc 320 ||||||||||||||||||||| Sbjct: 683 ttcaaggccatcaccgaggcc 703
>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92909 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ctctcctcctcctctttctcatcct 34 |||||||||||||||||||| |||| Sbjct: 46681 ctctcctcctcctctttctcctcct 46657
>gb|AC155831.7| Mus musculus 10 BAC RP24-189B10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 197153 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 65550 tctcctcctcctctttctcctcctc 65526
>gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199418 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 177134 tctcctcctcctctttctcctcctc 177110
>gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, complete sequence Length = 168624 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 111528 ctcctcctcctctttctcctcctct 111552
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 1464 tctcctcctcctctttctcttcctc 1440
>gb|AC079142.15| Homo sapiens X BAC RP11-657D19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162639 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 18195 tctcctcctcctctttctcttcctc 18171
>gb|BC090088.1| Xenopus tropicalis MGC97552 protein, mRNA (cDNA clone MGC:97552 IMAGE:5384188), complete cds Length = 3635 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 |||| |||||||||||||||||||| Sbjct: 3137 tctcatcctcctctttctcatcctc 3113 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tcctcctctttctcatcctc 35 |||||||||||||||||||| Sbjct: 3087 tcctcctctttctcatcctc 3068
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 2431 ctcctcctcctcttgctcatcctct 2407
>ref|XM_573709.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (LOC498450), mRNA Length = 887 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcctcctctttctcatcctct 36 ||||||||||||||||||||| Sbjct: 623 tcctcctctttctcatcctct 603
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 49104 tctcctcctcctctttctcttcctc 49128
>ref|NM_001034873.1| Mus musculus kinase suppressor of ras 2 (Ksr2), mRNA Length = 2283 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 410 ctcctcctcctctttctcctcctct 434
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 155576 tctcctcctcctctttctcctcctc 155600 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 155562 ctcctcctcctctttctcctcctc 155585
>gb|AC167564.1| Mus musculus BAC clone RP24-224G11 from chromosome 14, complete sequence Length = 204945 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcctcctctttctcatcctc 35 ||||||||||||||||||||| Sbjct: 190180 ctcctcctctttctcatcctc 190160
>gb|AC098874.6| Homo sapiens BAC clone RP11-1299G23 from 2, complete sequence Length = 136367 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctctctg 39 ||||||||||||| ||||| ||||||||| Sbjct: 43093 tctcctcctcctccttctcctcctctctg 43065
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 200369 tctcctcctcctctttctcctcctc 200393 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 200355 ctcctcctcctctttctcctcctc 200378
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ttcaaggccatcaccgaggcc 320 ||||||||||||||||||||| Sbjct: 677 ttcaaggccatcaccgaggcc 697
>emb|CT573086.9| Mouse DNA sequence from clone RP23-163K5 on chromosome 16, complete sequence Length = 208384 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 65903 ctcctcctcctctttctcctcctct 65927
>dbj|AK065697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037L21, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 219 cgcgccgcgtacaagggcctcgccaggaaatggcaccccgacaag 263 |||||||||||| | ||||||||| ||| |||||||| |||||| Sbjct: 304 cgcgccgcgtaccaccgcctcgccatgaagtggcacccggacaag 348
>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete sequence Length = 266295 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 ctctcctcctcctctttctcatcctctct 38 |||||||||||||||| ||| |||||||| Sbjct: 94641 ctctcctcctcctcttcctcctcctctct 94669
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 170636 ctcctcctcctctttctcttcctct 170660 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcctcctcctctttctcatcctct 36 ||||||||||||||||| |||||| Sbjct: 170730 tcctcctcctctttctcttcctct 170753
>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds Length = 17522 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 6647 ctcctcctcctctttctcctcctct 6671
>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete sequence Length = 215154 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||||||| |||||| Sbjct: 206644 ctcctcctcctctttctcctcctct 206668
>emb|BX284615.6| Mouse DNA sequence from clone RP23-20B20 on chromosome 2, complete sequence Length = 98233 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctct 36 |||||||||||||| |||||||||| Sbjct: 68681 ctcctcctcctcttcctcatcctct 68657
>gb|AC129975.21| Mus musculus chromosome 14, clone RP23-447I12, complete sequence Length = 168905 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcctcctctttctcatcctc 35 ||||||||||||||||||||| Sbjct: 78923 ctcctcctctttctcatcctc 78903
>emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chromosome 13, complete sequence Length = 174127 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 66028 tctcctcctcctctttctcctcctc 66004
>dbj|AP006193.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-815I22, complete sequence Length = 205834 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 63585 tctcctcctcctctttctcctcctc 63561 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 63617 ctcctcctcctctttctcctcctc 63594 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 63599 ctcctcctcctctttctcctcctc 63576 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ctcctcctcctctttctcatcctc 35 |||||||||||||||||| ||||| Sbjct: 63566 ctcctcctcctctttctcctcctc 63543
>emb|AL928678.16| Mouse DNA sequence from clone RP23-273B19 on chromosome 2, complete sequence Length = 167304 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 165634 tctcctcctcctctttctcctcctc 165610 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 165619 tctcctcctcctctttctcctcctc 165595
>emb|CT573034.8| Mouse DNA sequence from clone RP23-156C20 on chromosome 13, complete sequence Length = 117658 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tctcctcctcctctttctcatcctc 35 ||||||||||||||||||| ||||| Sbjct: 57501 tctcctcctcctctttctcctcctc 57525 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,004,054 Number of Sequences: 3902068 Number of extensions: 4004054 Number of successful extensions: 180436 Number of sequences better than 10.0: 825 Number of HSP's better than 10.0 without gapping: 831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 174324 Number of HSP's gapped (non-prelim): 6112 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
