ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44h10 |
|---|---|
| Clone Library Name | barley_pub |
>H1_WHEAT (P27806) Histone H1| Length = 238 Score = 68.2 bits (165), Expect = 5e-12 Identities = 29/47 (61%), Positives = 41/47 (87%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 +HP+Y EM+ EAIAALK+R+GSS++AI K++E+KH LPANF+K+L Sbjct: 54 AHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKIL 100
>H1_LYCES (P37218) Histone H1| Length = 287 Score = 66.2 bits (160), Expect = 2e-11 Identities = 32/47 (68%), Positives = 39/47 (82%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 +HP YFEMIK+AI LK+RTGSS AI K++EEK KSLP+NFKK+L Sbjct: 55 THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQ-KSLPSNFKKLL 100
>H1_PEA (P08283) Histone H1 (PsH1b) (PsH1b-40)| Length = 265 Score = 65.5 bits (158), Expect = 3e-11 Identities = 32/47 (68%), Positives = 39/47 (82%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 SHPTY EMIK+AI +LK++ GSS AIAK++EEK K LPANFKK+L Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQ-KQLPANFKKLL 106
>H12_ARATH (P26569) Histone H1.2| Length = 273 Score = 65.5 bits (158), Expect = 3e-11 Identities = 32/47 (68%), Positives = 38/47 (80%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 SHPTY EMIK+AI LK+RTGSS AI K++EEKH KSLP F+K+L Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKH-KSLPPTFRKLL 106
>H1_LYCPN (P40267) Histone H1| Length = 202 Score = 64.7 bits (156), Expect = 6e-11 Identities = 28/47 (59%), Positives = 38/47 (80%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 +HP YF+MIKEA+ AL ++ GSS A+AKY+E+KH LPANF+K+L Sbjct: 48 THPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKIL 94
>H1_EUPES (Q9M5W4) Histone H1| Length = 229 Score = 64.7 bits (156), Expect = 6e-11 Identities = 30/47 (63%), Positives = 40/47 (85%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 SHP++FEMI +AI+ LK+RTGSS AI K+VE+KH K LP+NF+K+L Sbjct: 50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKH-KQLPSNFRKLL 95
>H1_MAIZE (P23444) Histone H1| Length = 245 Score = 63.2 bits (152), Expect = 2e-10 Identities = 29/48 (60%), Positives = 38/48 (79%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKMLS 258 +H Y EM+ EAI +LK+RTGSSS AIAK+VE+KH LP NF+K+L+ Sbjct: 48 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLN 95
>H11_ARATH (P26568) Histone H1.1| Length = 274 Score = 60.8 bits (146), Expect = 8e-10 Identities = 30/47 (63%), Positives = 36/47 (76%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 SHPTY EMIK+AI LK+RTGSS AI K++EEK K LP F+K+L Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKR-KELPPTFRKLL 106
>H11_VOLCA (Q08864) Histone H1-I| Length = 260 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSL-PANFKKMLS 258 +HP Y EM+K+AI LK+R GSS A+ K++E K+GK + NF K LS Sbjct: 57 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLS 105
>H12_VOLCA (Q08865) Histone H1-II| Length = 240 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSL-PANFKKMLS 258 +HP Y +M+ +AI +LK+R GSS A+ K++E K+GK + F K LS Sbjct: 23 THPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLS 71
>H1A_OLILU (P82898) Histone H1A (Fragment)| Length = 47 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYVE 210 PTY++M+K+AI ALKDR GSS AI KY+E Sbjct: 1 PTYYDMVKDAIVALKDRNGSSMQAIKKYIE 30
>H1_DICDI (P54671) Histone H1| Length = 179 Score = 45.8 bits (107), Expect = 3e-05 Identities = 25/47 (53%), Positives = 29/47 (61%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKML 255 +HPTY MI AIA KDRTGSS AI KY+E + + P FK L Sbjct: 22 NHPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVA-PDTFKTQL 67
>H1X_CAEEL (Q18336) Histone H1.X (Histone H1-like protein 1)| Length = 232 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH--GKSLP 234 HP+Y +MIK AI A+ + TGSS AI KY+ + + G++LP Sbjct: 37 HPSYMDMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLP 77
>H11_CAEEL (P10771) Histone H1.1| Length = 207 Score = 42.0 bits (97), Expect = 4e-04 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP Y MIKEAI LKDR G+S AI K++ + + Sbjct: 36 AHPPYINMIKEAIKQLKDRKGASKQAILKFISQNY 70
>H1B_OLILU (P82899) Histone H1B (Fragment)| Length = 42 Score = 41.2 bits (95), Expect = 7e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = +1 Query: 124 TYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 TY+E+IK AI ALK+R GSS+ AI KY+ E + Sbjct: 1 TYYELIKAAILALKERNGSSAQAIKKYILENN 32
>H15_CAEEL (O01833) Histone H1.5 (Histone H1-like protein 5)| Length = 224 Score = 41.2 bits (95), Expect = 7e-04 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP + MI EA++ LKDR GSS VAI K++ K+ Sbjct: 36 AHPPFINMITEAVSNLKDRKGSSRVAIFKFITAKY 70
>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)| Length = 252 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPAN 240 +HP + M+ EAI+++KDR G S AI KY+ K+ AN Sbjct: 50 AHPPFINMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQAN 91
>H1B_STRPU (P15869) Histone H1-beta, late embryonic| Length = 211 Score = 40.0 bits (92), Expect = 0.001 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP+ EM+ AI ALK+R GSS+ AI KY+E+ + Sbjct: 17 AHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNY 51
>H1_NEUCR (Q8J0U2) Histone H1| Length = 236 Score = 40.0 bits (92), Expect = 0.001 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +H +Y +MI +AI ALKDR GSS A+ KYV Sbjct: 36 THASYLDMITDAIVALKDRAGSSRQALKKYV 66
>H13_CAEEL (Q19743) Histone H1.3 (Histone H1-like protein 3)| Length = 207 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP Y M+ AI LK+R GSS +AI KY+ + + Sbjct: 36 AHPPYINMVTAAINGLKERKGSSKIAILKYITKNY 70
>H5_CHICK (P02259) Histone H5| Length = 189 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKMLS 258 SHPTY EMI AI A K R GSS +I KY++ + A+ + LS Sbjct: 24 SHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLS 71
>H5_ANSAN (P02258) Histone H5| Length = 193 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/35 (57%), Positives = 23/35 (65%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 SHPTY EMI AI A K R GSS +I KYV+ + Sbjct: 25 SHPTYSEMIAAAIRADKSRGGSSRQSIQKYVKSHY 59
>H12_CAEEL (P15796) Histone H1.2 (Histone H1-like protein 2)| Length = 190 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP + M+ AI++LK+R GSS +AI KY+ Sbjct: 36 AHPPFINMVTAAISSLKERKGSSKIAILKYI 66
>H16_CAEEL (O16277) Putative histone H1.6 (Histone H1-like protein 6)| Length = 189 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/31 (48%), Positives = 23/31 (74%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP + M+ AI++LK+R GSS +AI KY+ Sbjct: 33 AHPPFINMVTAAISSLKERKGSSKIAILKYI 63
>H5_CAIMO (P06513) Histone H5| Length = 193 Score = 38.1 bits (87), Expect = 0.006 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFKKMLS 258 SHP+Y EMI AI A K R GSS +I KYV+ + A+ + LS Sbjct: 25 SHPSYSEMIVAAIRAEKSRGGSSRQSIQKYVKSHYKVGQHADLQIKLS 72
>H1D_STRPU (P15870) Histone H1-delta| Length = 185 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVE 210 SHP Y +MI A+ +LK++ GSS AI KYV+ Sbjct: 32 SHPKYSDMIASALESLKEKKGSSRQAILKYVK 63
>H1_ASCIM (Q9UV33) Histone H1| Length = 213 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVE 210 HP+Y EM+ +AI LK+R GSS AI K+++ Sbjct: 27 HPSYKEMLTKAITELKERNGSSRQAIKKFIQ 57
>H1_EMENI (Q9P8F8) Histone H1| Length = 200 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +H +Y +MIK+AI LK+R GSS +I KYV Sbjct: 18 THTSYRDMIKDAILNLKERNGSSRQSIKKYV 48
>H5B_XENLA (P22845) Histone H5B (XLH5B) (H1E) (H1-SB)| Length = 194 Score = 36.2 bits (82), Expect = 0.021 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 HP Y +MI +A+ A K R+GSS +I KY++ + Sbjct: 23 HPKYSDMILDAVQAKKSRSGSSRQSIQKYIKNNY 56
>H1E_STRPU (P19375) Histone H1, early embryonic| Length = 205 Score = 35.8 bits (81), Expect = 0.028 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ AI LKDR GSS AI KY+ Sbjct: 17 AHPPAAEMVATAITELKDRNGSSLQAIKKYI 47
>H1E_CHIPA (P40262) Histone H1E| Length = 235 Score = 35.4 bits (80), Expect = 0.036 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP EM+ AI LK+R GSS +AI K+V ++ Sbjct: 50 THPPVSEMVVNAITTLKERGGSSLIAIKKFVAAQY 84
>H1E_CHITE (P40278) Histone H1E| Length = 237 Score = 35.4 bits (80), Expect = 0.036 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP EM+ AI LK+R GSS +AI K+V ++ Sbjct: 50 THPPVSEMVVNAITTLKERGGSSLIAIKKFVAAQY 84
>H1_LYTPI (P06144) Late histone H1| Length = 210 Score = 35.0 bits (79), Expect = 0.048 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP +M+ AI ALK+R GSS+ AI KY+ Sbjct: 17 AHPPTSQMVVAAITALKERGGSSNQAIKKYI 47
>H1O_CHITH (Q07134) Histone H1, orphon| Length = 244 Score = 35.0 bits (79), Expect = 0.048 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP EM+ A+ LK+R GSS +AI K+V ++ Sbjct: 53 THPPVSEMVVNAVTTLKERGGSSLIAIKKFVAAQY 87
>H10_RAT (P43278) Histone H1.0 (H1(0)) (Histone H1')| Length = 193 Score = 34.7 bits (78), Expect = 0.062 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 HP Y +MI AI A K+R GSS +I KY++ + Sbjct: 24 HPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHY 57
>H10_MOUSE (P10922) Histone H1' (H1.0) (H1(0))| Length = 193 Score = 34.7 bits (78), Expect = 0.062 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 HP Y +MI AI A K+R GSS +I KY++ + Sbjct: 24 HPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHY 57
>H10_HUMAN (P07305) Histone H1.0 (H1(0)) (Histone H1')| Length = 193 Score = 34.7 bits (78), Expect = 0.062 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 HP Y +MI AI A K+R GSS +I KY++ + Sbjct: 24 HPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHY 57
>H1G_STRPU (P07796) Histone H1-gamma, late| Length = 217 Score = 34.7 bits (78), Expect = 0.062 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP +M+ A+ ALK+R GSS+ AI KY+ Sbjct: 17 AHPPSSQMVVAAVTALKERGGSSTQAIKKYI 47
>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)| Length = 176 Score = 34.3 bits (77), Expect = 0.081 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGK 225 S P Y EMI + + AL + GS+ AI+KY+E +G+ Sbjct: 11 SLPPYPEMIVKTLEALNEPNGSNKSAISKYIETTYGE 47
>H1_PARAN (P02256) Histone H1, gonadal| Length = 248 Score = 34.3 bits (77), Expect = 0.081 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM++ AI A+K+R GSS+ I Y+ Sbjct: 41 THPPVLEMVQAAITAMKERKGSSAAKIKSYM 71
>H5A_XENLA (P22844) Histone H5A (XLH5A) (H1D) (H1-SA)| Length = 196 Score = 34.3 bits (77), Expect = 0.081 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 HP Y +MI A+ A K R+GSS +I KY++ + Sbjct: 25 HPKYSDMILAAVQAEKSRSGSSRQSIQKYIKNHY 58
>H1A_PLADU (P06894) Histone H1A, sperm| Length = 121 Score = 34.3 bits (77), Expect = 0.081 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP M+ AI LK+R GSS VAI KY+ Sbjct: 10 AHPPVATMVVTAILGLKERKGSSMVAIKKYI 40
>H1_ECHCR (P02257) Histone H1, gonadal (Fragment)| Length = 171 Score = 34.3 bits (77), Expect = 0.081 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP +MI AIAA K+R GSS I Y+ K+ Sbjct: 37 AHPPVIDMITAAIAAQKERRGSSVAKIQSYIAAKY 71
>H1_YEAST (P53551) Histone H1| Length = 258 Score = 33.9 bits (76), Expect = 0.11 Identities = 15/35 (42%), Positives = 24/35 (68%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 S +Y E+I E + ALK+R GSS A+ K+++E + Sbjct: 43 SSKSYRELIIEGLTALKERKGSSRPALKKFIKENY 77 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +1 Query: 124 TYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSL 231 TY EMI +++ L D GSS + + KYV++ L Sbjct: 179 TYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKL 214
>H1_ASHGO (Q75C22) Histone H1| Length = 225 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/33 (42%), Positives = 23/33 (69%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 P Y ++I EA+ +L +R GSS AI K++ +K+ Sbjct: 25 PKYKDLIVEAVVSLAERGGSSRQAIKKFIRDKY 57
>H1_TIGCA (P35060) Histone H1| Length = 181 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP M+ AI ALK+R GSS AI KY+ Sbjct: 20 THPPTSVMVMAAIKALKERNGSSLPAIKKYI 50
>H1B_PLADU (P06895) Histone H1B, sperm| Length = 119 Score = 32.7 bits (73), Expect = 0.24 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP + AI LKDR GSS VAI KY+ Sbjct: 8 THPPVATAVVAAILGLKDRKGSSMVAIKKYL 38
>H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein type 2 precursor| [Contains: Sperm-specific protein OE2 (Sperm-specific linker histone H1-like protein OE2); Sperm-specific protein OE3 (Protamine-like OS3)] (Fragment) Length = 126 Score = 32.3 bits (72), Expect = 0.31 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 PT MI AI A+K+R GSS AI KY+ Sbjct: 7 PTTLSMIVAAITAMKNRKGSSVQAIRKYI 35
>H13_DROVI (Q94972) Histone H1.3| Length = 250 Score = 32.3 bits (72), Expect = 0.31 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 SHP +M+ +I LK+R GSS +AI KY+ Sbjct: 44 SHPPTQQMVDASIKNLKERGGSSLLAIKKYI 74
>H12_DROVI (Q94555) Histone H1.2| Length = 250 Score = 32.3 bits (72), Expect = 0.31 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 SHP +M+ +I LK+R GSS +AI KY+ Sbjct: 44 SHPPTQQMVDASIKNLKERGGSSLLAIKKYI 74
>H11_DROVI (Q24704) Histone H1.1| Length = 250 Score = 32.3 bits (72), Expect = 0.31 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 SHP +M+ +I LK+R GSS +AI KY+ Sbjct: 44 SHPPTQQMVDASIKNLKERGGSSLLAIKKYI 74
>H1_DROME (P02255) Histone H1| Length = 256 Score = 32.3 bits (72), Expect = 0.31 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 SHP +M+ +I LK+R GSS +AI KY+ Sbjct: 45 SHPPTQQMVDASIKNLKERGGSSLLAIKKYI 75
>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor| [Contains: Sperm-specific protein OE1 (Sperm-specific linker histone H1-like protein OE1); Sperm-specific protein OE3 (Protamine-like OS3)] Length = 202 Score = 32.3 bits (72), Expect = 0.31 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 PT MI AI A+K+R GSS AI KY+ Sbjct: 43 PTTLSMIVAAITAMKNRKGSSVQAIRKYI 71
>H13_GLYBA (P40265) Histone H1-III| Length = 228 Score = 32.0 bits (71), Expect = 0.40 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 +HP EM+ AI LK+R GSS AI K++ ++ Sbjct: 39 THPPVSEMVVNAIKTLKERGGSSLQAIKKFLAAQY 73
>H11_WHEAT (P15871) Histone H1.1 (Fragment)| Length = 25 Score = 32.0 bits (71), Expect = 0.40 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = +1 Query: 136 MIKEAIAALKDRTGSSSVAIAKYVE 210 M+ EAIAALK+R GSS AI K E Sbjct: 1 MVSEAIAALKEREGSSEFAIGKKKE 25
>H12_GLYBA (P40264) Histone H1-II| Length = 232 Score = 31.6 bits (70), Expect = 0.53 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ AI LK+R GSS AI K++ Sbjct: 39 THPPVSEMVVNAIKTLKERGGSSLQAIKKFL 69
>H1L5_ENSMI (P27203) Histone H1-like protein EM5 (Fragment)| Length = 36 Score = 31.2 bits (69), Expect = 0.69 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +1 Query: 136 MIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPANFK 246 MI A+ ALK+R GSS AI KY++ ANFK Sbjct: 1 MITAAVGALKERGGSSRQAILKYIQ--------ANFK 29
>H1B_CHITE (P40276) Histone H1B| Length = 232 Score = 31.2 bits (69), Expect = 0.69 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ A+ LK+R GSS AI K++ Sbjct: 39 THPPVSEMVVNAVKTLKERGGSSLQAIKKFL 69
>H1_DROHY (P17268) Histone H1| Length = 249 Score = 31.2 bits (69), Expect = 0.69 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP +M+ +I LK+R GSS +AI KY+ Sbjct: 45 THPPTQQMVDASIQNLKERGGSSLLAIKKYI 75
>H1_CANGA (Q6FJX6) Histone H1| Length = 229 Score = 31.2 bits (69), Expect = 0.69 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKH 219 P Y +I E + AL + G+S VA+ KY+++ H Sbjct: 12 PGYKNLIIEGLKALNNGKGASRVALKKYIKDNH 44
>H1C_CHITE (P40277) Histone H1C| Length = 221 Score = 30.8 bits (68), Expect = 0.90 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ A+ LK+R GSS AI K++ Sbjct: 38 THPPVSEMVFNAVKTLKERGGSSLQAIKKFL 68
>H1_CHITH (P21895) Histone H1| Length = 231 Score = 30.8 bits (68), Expect = 0.90 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP +MI AI LK+R GSS AI K++ Sbjct: 38 THPPVSDMIVNAIKTLKERGGSSVQAIKKFL 68
>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) [Contains: Sperm-specific protein PHI-3 (Protamine-like protein PHI-3) (PL-IV)] Length = 202 Score = 30.8 bits (68), Expect = 0.90 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 P+ MI AI A+K+R GSS AI KY+ Sbjct: 42 PSTLSMIVAAITAMKNRKGSSVQAIRKYI 70
>H1L_MYTCA (P22974) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) Length = 148 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 121 PTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 P+ MI AI A+K+R GSS AI KY+ Sbjct: 42 PSTLSMIVAAIQAMKNRKGSSVQAIRKYI 70
>H11_GLYSA (P40266) Histone H1-I| Length = 233 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ A+ L ++ GSS +AI K++ Sbjct: 51 THPPVSEMVVNALKTLNEKGGSSVIAIKKFL 81
>H11_GLYBA (P40263) Histone H1-I| Length = 233 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 115 SHPTYFEMIKEAIAALKDRTGSSSVAIAKYV 207 +HP EM+ A+ L ++ GSS +AI K++ Sbjct: 51 THPPVSEMVVNALKTLNEKGGSSVIAIKKFL 81
>H13_WHEAT (P15872) Histone H1.3 (Fragments)| Length = 31 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 136 MIKEAIAALKDRTGSSSVAIAKYV 207 M+ EAI ALK+RTGS I K V Sbjct: 1 MVSEAITALKERTGSMLTQIKKLV 24
>MURC_BACSK (Q5WEA8) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 435 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/41 (26%), Positives = 24/41 (58%) Frame = +1 Query: 118 HPTYFEMIKEAIAALKDRTGSSSVAIAKYVEEKHGKSLPAN 240 HP YF+ +++ ++A + + AI +++H ++L AN Sbjct: 175 HPDYFKSVEDVVSAFQTMAKQVNKAIIACGDDEHLQTLQAN 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.127 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,385,485 Number of Sequences: 219361 Number of extensions: 163729 Number of successful extensions: 454 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 451 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
