ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467025.1| Oryza sativa (japonica cultivar-group), mRNA 139 7e-30
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
3dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
4dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
5dbj|AK111136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
8emb|CR533581.1| Oryza sativa chromosome 12, . Partial sequence f... 115 1e-22
9ref|XM_481664.1| Oryza sativa (japonica cultivar-group), mRNA 92 2e-15
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
11dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
12dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
13gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, compl... 44 0.33
14ref|XM_482592.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
15ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.3
16ref|XM_465631.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
17gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, comp... 42 1.3
18gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complet... 42 1.3
19gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.3
20gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, comp... 42 1.3
21gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromoso... 42 1.3
22gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, com... 42 1.3
23dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
28dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
29emb|AL928925.6| Mouse DNA sequence from clone RP23-405K7 on chro... 42 1.3
30ref|NM_192107.1| Oryza sativa (japonica cultivar-group), predic... 40 5.2
31ref|XM_614500.2| PREDICTED: Bos taurus similar to WNT1 inducible... 40 5.2
32gb|BC066994.1| Mus musculus RIKEN cDNA 2010005J08 gene, mRNA (cD... 40 5.2
33emb|CT025157.6| Mouse DNA sequence from clone RP23-292D13 on chr... 40 5.2
34gb|BC058334.1| Mus musculus cDNA clone IMAGE:5685224 40 5.2
35ref|XM_782369.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.2
36emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on ch... 40 5.2
37emb|CR861380.1| Pongo pygmaeus mRNA; cDNA DKFZp459D212 (from clo... 40 5.2
38ref|XM_702131.1| PREDICTED: Danio rerio similar to Wu:fc27e05 pr... 40 5.2
39ref|XM_678662.1| PREDICTED: Danio rerio similar to Wu:fc27e05 pr... 40 5.2
40ref|XM_702130.1| PREDICTED: Danio rerio similar to Wu:fc27e05 pr... 40 5.2
41dbj|AK035580.1| Mus musculus adult male urinary bladder cDNA, RI... 40 5.2
42dbj|AK041953.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 5.2
43dbj|AK033577.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 5.2
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
45gb|AC154315.2| Mus musculus BAC clone RP23-348I6 from chromosome... 40 5.2
46dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
47dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.2
48dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
49dbj|AK129378.1| Mus musculus mRNA for mKIAA1507 protein 40 5.2
50dbj|AK102920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
51dbj|AK066886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
52gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.2
53emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.2
54ref|NM_178623.2| Mus musculus RIKEN cDNA 2010005J08 gene (201000... 40 5.2 
>ref|XM_467025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 982

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 tggggaccctactccagctcccgggcattcttctccaacgtggccaccatcctcatcatc 267
           ||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 227 tggggcccctacgccagctcgcgcgcgttcttctccaacgtggccaccatcctcatcatc 286

                                             
Query: 268 ctcgcctgcgtctccctcctcgccttctccctcc 301
           |||||||||||||||||||||||||||| |||||
Sbjct: 287 ctcgcctgcgtctccctcctcgccttctgcctcc 320



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 91  gccatggcacgccggaccaaccacaccgcctcgccccccatgaacgccacggcggcg 147
           |||||| | |||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 77  gccatgacgcgccgggccaaccacaccgcctcgccctccgtgaacgccacgacggcg 133
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                            
Query: 208      tggggaccctactccagctcccgggcattcttctccaacgtggccaccatcctcatcatc 267
                ||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 25987001 tggggcccctacgccagctcgcgcgcgttcttctccaacgtggccaccatcctcatcatc 25986942

                                                  
Query: 268      ctcgcctgcgtctccctcctcgccttctccctcc 301
                |||||||||||||||||||||||||||| |||||
Sbjct: 25986941 ctcgcctgcgtctccctcctcgccttctgcctcc 25986908



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 91       gccatggcacgccggaccaaccacaccgcctcgccccccatgaacgccacggcggcg 147
                |||||| | |||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 25987151 gccatgacgcgccgggccaaccacaccgcctcgccctccgtgaacgccacgacggcg 25987095



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 277      gtctccctcctcgccttctcc 297
                |||||||||||||||||||||
Sbjct: 16456344 gtctccctcctcgccttctcc 16456324



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 274      tgcgtctccctcctcgccttctcc 297
                ||||||||||||||| ||||||||
Sbjct: 18417010 tgcgtctccctcctctccttctcc 18417033
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1282_H11
          Length = 143314

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                          
Query: 208    tggggaccctactccagctcccgggcattcttctccaacgtggccaccatcctcatcatc 267
              ||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 138342 tggggcccctacgccagctcgcgcgcgttcttctccaacgtggccaccatcctcatcatc 138283

                                                
Query: 268    ctcgcctgcgtctccctcctcgccttctccctcc 301
              |||||||||||||||||||||||||||| |||||
Sbjct: 138282 ctcgcctgcgtctccctcctcgccttctgcctcc 138249



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91     gccatggcacgccggaccaaccacaccgcctcgccccccatgaacgccacggcggcg 147
              |||||| | |||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 138492 gccatgacgcgccgggccaaccacaccgcctcgccctccgtgaacgccacgacggcg 138436
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>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030D07
          Length = 133321

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                         
Query: 208   tggggaccctactccagctcccgggcattcttctccaacgtggccaccatcctcatcatc 267
             ||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 50874 tggggcccctacgccagctcgcgcgcgttcttctccaacgtggccaccatcctcatcatc 50815

                                               
Query: 268   ctcgcctgcgtctccctcctcgccttctccctcc 301
             |||||||||||||||||||||||||||| |||||
Sbjct: 50814 ctcgcctgcgtctccctcctcgccttctgcctcc 50781



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 91    gccatggcacgccggaccaaccacaccgcctcgccccccatgaacgccacggcggcg 147
             |||||| | |||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 51024 gccatgacgcgccgggccaaccacaccgcctcgccctccgtgaacgccacgacggcg 50968
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>dbj|AK111136.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-D08, full
           insert sequence
          Length = 982

 Score =  139 bits (70), Expect = 7e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 tggggaccctactccagctcccgggcattcttctccaacgtggccaccatcctcatcatc 267
           ||||| |||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 227 tggggcccctacgccagctcgcgcgcgttcttctccaacgtggccaccatcctcatcatc 286

                                             
Query: 268 ctcgcctgcgtctccctcctcgccttctccctcc 301
           |||||||||||||||||||||||||||| |||||
Sbjct: 287 ctcgcctgcgtctccctcctcgccttctgcctcc 320



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 91  gccatggcacgccggaccaaccacaccgcctcgccccccatgaacgccacggcggcg 147
           |||||| | |||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 77  gccatgacgcgccgggccaaccacaccgcctcgccctccgtgaacgccacgacggcg 133
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                           
Query: 232     gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
               |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2263812 gcattcttctccaacgtggccaccatcctcatcatcttcgcccgcgtctccctcctcgcc 2263871

                         
Query: 292     ttctccctcc 301
               |||| |||||
Sbjct: 2263872 ttctacctcc 2263881



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 278     tctccctcctcgccttctccctcc 301
               |||||||||| |||||||||||||
Sbjct: 1550156 tctccctcctagccttctccctcc 1550133
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                           
Query: 232     gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
               |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2263756 gcattcttctccaacgtggccaccatcctcatcatcttcgcccgcgtctccctcctcgcc 2263815

                         
Query: 292     ttctccctcc 301
               |||| |||||
Sbjct: 2263816 ttctacctcc 2263825



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 278     tctccctcctcgccttctccctcc 301
               |||||||||| |||||||||||||
Sbjct: 1550156 tctccctcctagccttctccctcc 1550133
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>emb|CR533581.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0062G09
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 28333

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                         
Query: 232   gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
             |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 13000 gcattcttctccaacgtggccaccatcctcatcatcttcgcccgcgtctccctcctcgcc 12941

                       
Query: 292   ttctccctcc 301
             |||| |||||
Sbjct: 12940 ttctacctcc 12931
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>ref|XM_481664.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 345

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
           |||||||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||
Sbjct: 239 gcattcttctccaacaaggctaccatcctcatcatcctcgcctgcgtctccaacctcgcc 180

                     
Query: 292 ttctccctcc 301
           |||| |||||
Sbjct: 179 ttctgcctcc 170
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 232      gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
                |||||||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||
Sbjct: 14575902 gcattcttctccaacaaggctaccatcctcatcatcctcgcctgcgtctccaacctcgcc 14575961

                          
Query: 292      ttctccctcc 301
                |||| |||||
Sbjct: 14575962 ttctgcctcc 14575971



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 277      gtctccctcctcgccttctcc 297
                |||||||||||||||||||||
Sbjct: 21308053 gtctccctcctcgccttctcc 21308073
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>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0474F07
          Length = 136440

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 232   gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
             |||||||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||
Sbjct: 13606 gcattcttctccaacaaggctaccatcctcatcatcctcgcctgcgtctccaacctcgcc 13665

                       
Query: 292   ttctccctcc 301
             |||| |||||
Sbjct: 13666 ttctgcctcc 13675
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>dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0002F11
          Length = 135446

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 232   gcattcttctccaacgtggccaccatcctcatcatcctcgcctgcgtctccctcctcgcc 291
             |||||||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||
Sbjct: 79376 gcattcttctccaacaaggctaccatcctcatcatcctcgcctgcgtctccaacctcgcc 79435

                       
Query: 292   ttctccctcc 301
             |||| |||||
Sbjct: 79436 ttctgcctcc 79445
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>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence
          Length = 138567

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 219    ctccagctcccgggcattcttctcca 244
              ||||||||||||||| ||||||||||
Sbjct: 133654 ctccagctcccgggctttcttctcca 133629
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>ref|XM_482592.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1952

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 gtctccctcctcgccttctcc 297
           |||||||||||||||||||||
Sbjct: 317 gtctccctcctcgccttctcc 337
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>ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016C11.34
           mRNA
          Length = 2061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 gtctccctcctcgccttctcc 297
           |||||||||||||||||||||
Sbjct: 411 gtctccctcctcgccttctcc 431
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>ref|XM_465631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 585

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 gtctccctcctcgccttctcc 297
           |||||||||||||||||||||
Sbjct: 94  gtctccctcctcgccttctcc 114
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>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence
          Length = 176797

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 280    tccctcctcgccttctccctc 300
              |||||||||||||||||||||
Sbjct: 174481 tccctcctcgccttctccctc 174461
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>gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complete sequence
          Length = 188207

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 254    ccatcctcatcatcctcgcct 274
              |||||||||||||||||||||
Sbjct: 143544 ccatcctcatcatcctcgcct 143524
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 257     tcctcatcatcctcgcctgcgtctc 281
               ||||||||||||||||| |||||||
Sbjct: 3029399 tcctcatcatcctcgccggcgtctc 3029375
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>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence
          Length = 148054

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 280   tccctcctcgccttctccctc 300
             |||||||||||||||||||||
Sbjct: 48921 tccctcctcgccttctccctc 48901
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>gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromosome 7, complete sequence
          Length = 196528

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 254    ccatcctcatcatcctcgcct 274
              |||||||||||||||||||||
Sbjct: 155769 ccatcctcatcatcctcgcct 155749
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>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence
          Length = 115368

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 280   tccctcctcgccttctccctc 300
             |||||||||||||||||||||
Sbjct: 25497 tccctcctcgccttctccctc 25477
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>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0419C03
          Length = 146929

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 277    gtctccctcctcgccttctcc 297
              |||||||||||||||||||||
Sbjct: 142010 gtctccctcctcgccttctcc 141990
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>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0527E02
          Length = 176826

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   gtctccctcctcgccttctcc 297
             |||||||||||||||||||||
Sbjct: 29759 gtctccctcctcgccttctcc 29739
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016C11
          Length = 170723

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 277    gtctccctcctcgccttctcc 297
              |||||||||||||||||||||
Sbjct: 134330 gtctccctcctcgccttctcc 134350
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>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0524F03
          Length = 167696

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  gtctccctcctcgccttctcc 297
            |||||||||||||||||||||
Sbjct: 7978 gtctccctcctcgccttctcc 7998
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>dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H08, full
           insert sequence
          Length = 1951

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 gtctccctcctcgccttctcc 297
           |||||||||||||||||||||
Sbjct: 316 gtctccctcctcgccttctcc 336
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>dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040O12, full
           insert sequence
          Length = 2061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 gtctccctcctcgccttctcc 297
           |||||||||||||||||||||
Sbjct: 411 gtctccctcctcgccttctcc 431
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>emb|AL928925.6| Mouse DNA sequence from clone RP23-405K7 on chromosome 2, complete
             sequence
          Length = 145382

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   actccagctcccgggcattct 238
             |||||||||||||||||||||
Sbjct: 37317 actccagctcccgggcattct 37297
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>ref|NM_192107.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cctcctcgccttctccctcc 301
           ||||||||||||||||||||
Sbjct: 56  cctcctcgccttctccctcc 75
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>ref|XM_614500.2| PREDICTED: Bos taurus similar to WNT1 inducible signaling pathway
           protein 2 precursor (WISP-2) (Connective tissue growth
           factor-like protein) (CTGF-L) (Connective tissue growth
           factor-related protein 58) (LOC534658), mRNA
          Length = 1768

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cctcctcgccttctccctcc 301
           ||||||||||||||||||||
Sbjct: 73  cctcctcgccttctccctcc 92
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>gb|BC066994.1| Mus musculus RIKEN cDNA 2010005J08 gene, mRNA (cDNA clone MGC:91347
            IMAGE:5696000), complete cds
          Length = 3342

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 1872 cctcctcgcaggctcgccct 1853
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>emb|CT025157.6| Mouse DNA sequence from clone RP23-292D13 on chromosome 14, complete
             sequence
          Length = 179561

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   tctccctcctcgccttctccctcc 301
             ||||||||||| ||||||||||||
Sbjct: 71410 tctccctcctccccttctccctcc 71387
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>gb|BC058334.1| Mus musculus cDNA clone IMAGE:5685224
          Length = 2051

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 8  cctcctcgcaggctcgccct 27
          ||||||||||||||||||||
Sbjct: 57 cctcctcgcaggctcgccct 38
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>ref|XM_782369.1| PREDICTED: Strongylocentrotus purpuratus similar to Histamine H2
           receptor (H2R) (Gastric receptor I) (LOC582418), mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 251 ccaccatcctcatcatcctcgcctgcgtctcc 282
           ||||||||||||||||| || ||| |||||||
Sbjct: 632 ccaccatcctcatcatcttctcctacgtctcc 663
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>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the
             Mrps24 gene for mitochondrial ribosomal protein S24, a
             novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d)
             pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene
             for phosphoglycerate mutase 2, a pseudogene similar to
             part of H+ transporting mitochondrial F0 complex ATP
             synthase subunit F Atp5j, the Polm gene for polymerase
             (DNA directed) mu, the Aebp1 gene for AE binding protein
             1, the Pold2 gene for polymerase (DNA directed) delta 2
             regulatory subunit, novel gene (1600028I17Rik) and seven
             CpG islands, complete sequence
          Length = 195129

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     cctcctcgcaggctcgccct 27
             ||||||||||||||||||||
Sbjct: 22049 cctcctcgcaggctcgccct 22068
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>emb|CR861380.1| Pongo pygmaeus mRNA; cDNA DKFZp459D212 (from clone DKFZp459D212)
          Length = 3079

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 caccatcctcatcatcctcg 271
           ||||||||||||||||||||
Sbjct: 866 caccatcctcatcatcctcg 847
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>ref|XM_702131.1| PREDICTED: Danio rerio similar to Wu:fc27e05 protein, transcript
           variant 3 (LOC557254), mRNA
          Length = 2048

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 ccaccatcctcatcatcctc 270
           ||||||||||||||||||||
Sbjct: 614 ccaccatcctcatcatcctc 595
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>ref|XM_678662.1| PREDICTED: Danio rerio similar to Wu:fc27e05 protein, transcript
           variant 1 (LOC557254), mRNA
          Length = 2150

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 ccaccatcctcatcatcctc 270
           ||||||||||||||||||||
Sbjct: 716 ccaccatcctcatcatcctc 697
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>ref|XM_702130.1| PREDICTED: Danio rerio similar to Wu:fc27e05 protein, transcript
           variant 2 (LOC557254), mRNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 ccaccatcctcatcatcctc 270
           ||||||||||||||||||||
Sbjct: 620 ccaccatcctcatcatcctc 601
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>dbj|AK035580.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530070K24 product:hypothetical
            protein, full insert sequence
          Length = 3973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 1987 cctcctcgcaggctcgccct 1968
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>dbj|AK041953.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630048K14 product:KIAA1507 PROTEIN
            (FRAGMENT) homolog [Homo sapiens], full insert sequence
          Length = 4212

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 2240 cctcctcgcaggctcgccct 2221
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>dbj|AK033577.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
            library, clone:9130004K16 product:hypothetical
            ATP/GTP-binding site motif A (P-loop) containing protein,
            full insert sequence
          Length = 4320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 1549 cctcctcgcaggctcgccct 1530
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      cctcctcgccttctccctcc 301
                ||||||||||||||||||||
Sbjct: 28367636 cctcctcgccttctccctcc 28367617
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>gb|AC154315.2| Mus musculus BAC clone RP23-348I6 from chromosome 14, complete sequence
          Length = 187052

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   tctccctcctcgccttctccctcc 301
             ||||||||||| ||||||||||||
Sbjct: 46269 tctccctcctccccttctccctcc 46246
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>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   cctcctcgccttctccctcc 301
             ||||||||||||||||||||
Sbjct: 82736 cctcctcgccttctccctcc 82717
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     caccatcctcatcatcctcg 271
               ||||||||||||||||||||
Sbjct: 3481798 caccatcctcatcatcctcg 3481779
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0001A11
          Length = 153252

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 274   tgcgtctccctcctcgccttctcc 297
             ||||||||||||||| ||||||||
Sbjct: 79934 tgcgtctccctcctctccttctcc 79957
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>dbj|AK129378.1| Mus musculus mRNA for mKIAA1507 protein
          Length = 3605

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 1633 cctcctcgcaggctcgccct 1614
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>dbj|AK102920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114B16, full
           insert sequence
          Length = 2483

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 274 tgcgtctccctcctcgccttctcc 297
           ||||||||||||||| ||||||||
Sbjct: 196 tgcgtctccctcctctccttctcc 173
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>dbj|AK066886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088C17, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 tctccctcctcgccttctccctcc 301
           |||||||||| |||||||||||||
Sbjct: 90  tctccctcctagccttctccctcc 113
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    tggccaccatcctcatcatc 267
              ||||||||||||||||||||
Sbjct: 782278 tggccaccatcctcatcatc 782297
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>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   tctccctcctcgccttctccctcc 301
             |||||||||| |||||||||||||
Sbjct: 75576 tctccctcctagccttctccctcc 75599
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>ref|NM_178623.2| Mus musculus RIKEN cDNA 2010005J08 gene (2010005J08Rik), mRNA
          Length = 4320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    cctcctcgcaggctcgccct 27
            ||||||||||||||||||||
Sbjct: 1549 cctcctcgcaggctcgccct 1530


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,232,418
Number of Sequences: 3902068
Number of extensions: 2232418
Number of successful extensions: 45053
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44605
Number of HSP's gapped (non-prelim): 448
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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