ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast44h07 |
|---|---|
| Clone Library Name | barley_pub |
>DHBY_CAEEL (O16925) Putative steroid dehydrogenase F25G6.5 (EC 1.1.1.-)| Length = 314 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%) Frame = +2 Query: 140 PKDLRRSYGP-WAVVTGPTSGIGRSMAVELARR 235 P DL+R+ G WAVVTG T GIGRS A++LARR Sbjct: 44 PIDLKRTAGASWAVVTGATDGIGRSYALDLARR 76
>DHBX_CAEEL (O17795) Putative steroid dehydrogenase F11A5.12 (EC 1.1.1.-)| Length = 315 Score = 41.6 bits (96), Expect = 6e-04 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%) Frame = +2 Query: 122 AFCLRPPKDLRRSYGP-WAVVTGPTSGIGRSMAVELARR 235 AFC P DL++ G WAVVTG T GIG+S + ELARR Sbjct: 34 AFC--QPIDLKKKAGASWAVVTGATDGIGKSYSFELARR 70
>DHB3_RAT (O54939) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62)| (17-beta-HSD 3) (Testicular 17-beta-hydroxysteroid dehydrogenase) Length = 306 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +2 Query: 119 LAFCLRPPKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 L+FC P RS G WAV+TG GIG++ + ELAR Sbjct: 29 LSFCKALPGSFLRSMGQWAVITGAGDGIGKAYSFELAR 66
>DHB3_MOUSE (P70385) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62)| (17-beta-HSD 3) (Testicular 17-beta-hydroxysteroid dehydrogenase) Length = 305 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = +2 Query: 119 LAFCLRPPKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 L FC P RS G WAV+TG GIG++ + ELAR Sbjct: 29 LRFCKALPSSFLRSMGQWAVITGAGDGIGKAYSFELAR 66
>LE767_CAEEL (Q09517) Putative steroid dehydrogenase let-767 (EC 1.1.1.-)| (Lethal protein 767) Length = 316 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +2 Query: 125 FCLRPPKDLRRSYGP-WAVVTGPTSGIGRSMAVELARR 235 + L P DL++ G WAVVTG T GIG++ A ELARR Sbjct: 33 YVLLSPIDLKKRAGASWAVVTGATDGIGKAYAFELARR 70
>DHB3_HUMAN (P37058) Estradiol 17-beta-dehydrogenase 3 (EC 1.1.1.62)| (17-beta-HSD 3) (Testicular 17-beta-hydroxysteroid dehydrogenase) Length = 310 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/32 (53%), Positives = 22/32 (68%) Frame = +2 Query: 140 PKDLRRSYGPWAVVTGPTSGIGRSMAVELARR 235 PK RS G WAV+TG GIG++ + ELA+R Sbjct: 40 PKSFLRSMGQWAVITGAGDGIGKAYSFELAKR 71
>DHBV_CAEEL (Q17703) Putative steroid dehydrogenase C06B3.4 (EC 1.1.1.-)| Length = 314 Score = 38.9 bits (89), Expect = 0.004 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +2 Query: 125 FCLRPPKDLRRSYGP-WAVVTGPTSGIGRSMAVELARR 235 FC P DL++ G WAVVTG T GIG+S + ELA+R Sbjct: 35 FC--QPIDLKKKAGASWAVVTGATDGIGKSYSFELAKR 70
>DHBW_CAEEL (Q17704) Putative steroid dehydrogenase C06B3.5 (EC 1.1.1.-)| Length = 349 Score = 38.1 bits (87), Expect = 0.006 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +2 Query: 140 PKDLRRSYGP-WAVVTGPTSGIGRSMAVELARR 235 P DL++ G WAV+TG T GIG+S + ELA+R Sbjct: 38 PIDLKKKAGASWAVITGGTDGIGKSFSFELAKR 70
>DHBX_ANAPL (O57314) Putative steroid dehydrogenase SPM2 (EC 1.1.1.-)| Length = 312 Score = 36.6 bits (83), Expect = 0.018 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G WAVVTG T GIG++ A ELA+R Sbjct: 48 GAWAVVTGATDGIGKAYAKELAKR 71
>DHBK_MOUSE (O70503) Putative steroid dehydrogenase KIK-I (EC 1.1.1.-)| Length = 312 Score = 36.2 bits (82), Expect = 0.023 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G WAVVTG T GIG++ A ELA+R Sbjct: 50 GEWAVVTGGTDGIGKAYAEELAKR 73
>YD1F_SCHPO (Q10245) Hypothetical oxidoreductase C4G9.15 in chromosome I (EC| 1.-.-.-) Length = 341 Score = 32.3 bits (72), Expect = 0.34 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELA 229 G WAVVTG T GIG+ A +LA Sbjct: 57 GYWAVVTGATDGIGKEYATQLA 78
>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X| homolog precursor (EC 1.1.-.-) (SCAD family protein) (DHRSXY) (Fragment) Length = 280 Score = 31.6 bits (70), Expect = 0.57 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = +2 Query: 134 RPPKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 RPP L G A+VTG T+GIGRS A +LAR Sbjct: 34 RPPV-LPPQPGRVAIVTGATAGIGRSTARQLAR 65
>DHS5_CAEEL (Q10130) Putative oxidoreductase dhs-5 (EC 1.-.-.-)| Length = 378 Score = 30.8 bits (68), Expect = 0.98 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +2 Query: 170 WAVVTGPTSGIGRSMAVELARR 235 W VV+G T GIG++ +ELA+R Sbjct: 90 WTVVSGGTDGIGKAYTLELAKR 111
>THR1_GLOLA (P87025) Trihydroxynaphthalene reductase (EC 1.1.1.-) (T3HN| reductase) Length = 272 Score = 30.8 bits (68), Expect = 0.98 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G A+VTG GIGR MA+EL RR Sbjct: 29 GKVALVTGAGRGIGREMAMELGRR 52
>T4HR_MAGGR (Q12634) Tetrahydroxynaphthalene reductase (EC 1.1.1.252) (T4HN| reductase) (THNR) Length = 282 Score = 30.8 bits (68), Expect = 0.98 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G A+VTG GIGR MA+EL RR Sbjct: 28 GKVALVTGAGRGIGREMAMELGRR 51
>DHS27_CAEEL (Q11177) Putative oxidoreductase dhs-27 (EC 1.-.-.-)| Length = 816 Score = 30.0 bits (66), Expect = 1.7 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 113 SGLAFCLRPPKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 S L + P DL W V+TG T GIG++ EL + Sbjct: 486 SVLVHFITPKHDLDYLKDTWTVITGGTDGIGKAYIEELCK 525
>YHXC_BACSU (P40397) Hypothetical oxidoreductase yhxC (EC 1.-.-.-) (ORFX)| Length = 285 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +2 Query: 140 PKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 PK ++ G A++TG SGIGR+++V A+ Sbjct: 33 PKKAKKLEGKTAIITGGDSGIGRAVSVLFAK 63
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G +VTG +GIG+ A+ELARR Sbjct: 38 GKTVIVTGANTGIGKQTALELARR 61
>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate| specificity short chain dehydrogenase/reductase 2) Length = 316 Score = 29.3 bits (64), Expect = 2.8 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 161 YGPWAVVTGPTSGIGRSMAVELARR 235 +G V+TG +GIG+ A ELARR Sbjct: 38 FGKVVVITGANTGIGKETARELARR 62
>FABG_BACSU (P51831) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/20 (60%), Positives = 18/20 (90%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELAR 232 A+VTG + GIGRS+A++LA+ Sbjct: 7 AIVTGASRGIGRSIALDLAK 26
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 28.9 bits (63), Expect = 3.7 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G +VTG +GIG+ A+ELA+R Sbjct: 38 GKTVIVTGANTGIGKQTALELAKR 61
>Y4EK_RHISN (P55434) Putative short-chain type dehydrogenase/reductase y4eK (EC| 1.-.-.-) Length = 248 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/19 (63%), Positives = 18/19 (94%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG +SGIG+++A+ELA Sbjct: 10 ALVTGASSGIGKAIALELA 28
>DHI1_SHEEP (P51975) Corticosteroid 11-beta-dehydrogenase isozyme 1 (EC| 1.1.1.146) (11-DH) (11-beta-hydroxysteroid dehydrogenase 1) (11-beta-HSD1) Length = 291 Score = 28.5 bits (62), Expect = 4.9 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELAR 232 G +VTG + GIGR MA LAR Sbjct: 33 GKRVIVTGASKGIGREMAYHLAR 55
>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)| Length = 316 Score = 28.1 bits (61), Expect = 6.3 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G V+TG +GIG+ A ELARR Sbjct: 39 GKVVVITGANTGIGKETARELARR 62
>FABG_HAEIN (P43713) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 242 Score = 28.1 bits (61), Expect = 6.3 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 164 GPWAVVTGPTSGIGRSMAVELARR 235 G A+VTG T GIGR++A EL+ + Sbjct: 3 GKIALVTGSTRGIGRAIAEELSSK 26
>FABG_STAAW (P0A0I0) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>FABG_STAAS (Q6G9Y2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>FABG_STAAR (Q6GHK4) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>FABG_STAAN (P99093) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>FABG_STAAM (P0A0H9) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>FABG_STAAC (Q5HGK2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 7 ALVTGASRGIGRSIALQLA 25
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 131 LRPPKDLRRSYGPWAVVTGPTSGIGRSMAVELAR 232 LR D +G ++TG SG+GR+ A EL R Sbjct: 32 LRRGGDPGLMHGKTVLITGANSGLGRATAAELLR 65
>DHRS2_HUMAN (Q13268) Dehydrogenase/reductase SDR family member 2 (EC 1.1.-.-)| (HEP27 protein) (Protein D) Length = 257 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELAR 232 AVVTG TSGIG ++A LAR Sbjct: 16 AVVTGSTSGIGFAIARRLAR 35
>FABG_STAES (Q8CPI3) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 5 ALVTGASRGIGRSIALQLA 23
>FABG_STAEQ (Q5HPW0) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 173 AVVTGPTSGIGRSMAVELA 229 A+VTG + GIGRS+A++LA Sbjct: 5 ALVTGASRGIGRSIALQLA 23 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,231,340 Number of Sequences: 219361 Number of extensions: 292367 Number of successful extensions: 944 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 944 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
