ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (... 28 5.2
2GPMI_WOLPM (Q73GR4) 2,3-bisphosphoglycerate-independent phosphog... 28 6.8

>MYSC_CHICK (P29616) Myosin heavy chain, cardiac muscle isoform (Fragment)|
          Length = 1102

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 15  SHAHRHHPFSCGAARGFRGERKLAMAEQPHAEDAGHKPETLMEKIA 152
           SHA+RH   +  +ARG + + K     Q   +D GH  E L E++A
Sbjct: 796 SHANRHAAEATKSARGLQTQIK---ELQVQLDDLGHLNEDLKEQLA 838



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>GPMI_WOLPM (Q73GR4) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 506

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +3

Query: 18  HAHRHHPFSCGAARGFRGERKLAMAEQPHAEDAGHKPE----TLMEKIADKLH 164
           +AH    F+CG    F GE ++ +   P  +    +PE     L EK+ +K+H
Sbjct: 324 YAHVTFFFNCGKEEPFSGEERI-LIPSPKVQTYDLQPEMSAFELTEKLVEKIH 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,620,413
Number of Sequences: 219361
Number of extensions: 291320
Number of successful extensions: 1322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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