>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
            (Endostatin-XV)]
          Length = 1367

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 121  PPAEP-FPGLAGR*AEKITLPEAPAGVSGLP 32
            PP  P +PGL G+  E +  P+ P G+ GLP
Sbjct: 1033 PPGLPGYPGLVGQKGEAVVGPQGPPGIPGLP 1063

>US10_EHV4 (P18349) 28 kDa protein (ORF3)|
          Length = 259

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 11 VAVDGDVRKSGDAGGGLG 64
          +AVDGDVR  GD GGG G
Sbjct: 40 MAVDGDVRTGGDCGGGEG 57

>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1|
          Length = 2173

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 126  PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 10
            P  R +R Q W AV+    L   P PASP  L  P+ A+
Sbjct: 1832 PKSRPSRNQRWGAVRADESLTAIPEPASPQLLDIPTHAS 1870

>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 126  PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 10
            P  + +R Q W AV+    L   P PASP  L +P  A+
Sbjct: 1830 PKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHAS 1868

>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
            (Endostatin-XV) (Restin) (Related to endostatin)]
          Length = 1388

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 121  PPAEPF-PGLAGR*AEKITLPEAPAGVSGLP 32
            PP  P  PG AG+  E +  P+ P G  GLP
Sbjct: 1054 PPGLPGNPGPAGQKGETVVGPQGPPGAPGLP 1084

>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 126  PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 10
            P  + +R Q W AV+    L   P PASP  L +P  A+
Sbjct: 1748 PKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHAS 1786


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,629,901
Number of Sequences: 219361
Number of extensions: 565093
Number of successful extensions: 1478
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)