| Clone Name | bast44g07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 85.7 bits (43), Expect = 6e-15 Identities = 43/43 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcgagctaggcttggaggtgagcgaaaa 43 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 tcttcttcttctctagcgagctaggcttggaggtgagcgaaaa 64
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 50.1 bits (25), Expect = 3e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 15 agcgagctaggcttggaggtgagcgaaaa 43 ||||||||||||| ||||||||||||||| Sbjct: 67 agcgagctaggctcggaggtgagcgaaaa 95
>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete sequence Length = 179035 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gagctaggcttggaggtga 36 ||||||||||||||||||| Sbjct: 48053 gagctaggcttggaggtga 48071
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 426648 tcttcttcttctctagcg 426665
>gb|AC131804.4| Mus musculus BAC clone RP24-553C6 from chromosome 1, complete sequence Length = 138699 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 taggcttggaggtgagcg 39 |||||||||||||||||| Sbjct: 89048 taggcttggaggtgagcg 89031
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 tcttcttcttctctagcgagct 22 ||||||||||||| |||||||| Sbjct: 1136 tcttcttcttctccagcgagct 1115
>gb|AE004312.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 220 of 251 of the complete chromosome Length = 12625 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 19 agctaggcttggaggtgagcga 40 ||||||||||| |||||||||| Sbjct: 8413 agctaggcttgaaggtgagcga 8392
>emb|AL353782.23| Human DNA sequence from clone RP11-207C11 on chromosome 9 Contains the 5' end of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2), the 3' end of a novel gene (FLJ36928), a CDC10 cell division cycle 10 homolog (S. cerevisiae) (SEPT7) pseudogene and a CpG island, complete sequence Length = 165358 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 105629 tcttcttcttctctagcg 105612
>emb|BX033490.1|CNS08Y06 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5AA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 881 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 taggcttggaggtgagcg 39 |||||||||||||||||| Sbjct: 573 taggcttggaggtgagcg 556
>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete sequence Length = 176390 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 21 ctaggcttggaggtgagc 38 |||||||||||||||||| Sbjct: 35660 ctaggcttggaggtgagc 35643
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 tcttcttcttctctagcgagct 22 ||||||||||||| |||||||| Sbjct: 24880551 tcttcttcttctccagcgagct 24880530
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 27204869 tcttcttcttctctagcg 27204886
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 tcttcttcttctctagcgagct 22 ||||||||||||| |||||||| Sbjct: 1110 tcttcttcttctccagcgagct 1089
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 tcttcttctctagcgagc 21 |||||||||||||||||| Sbjct: 1022898 tcttcttctctagcgagc 1022915
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 27130469 tcttcttcttctctagcg 27130486
>emb|AL359183.16| Human DNA sequence from clone RP11-327E2 on chromosome 10 Contains the 3' end of the gene for equilibrative nucleoside transporter 3 (ENT3), the 5' end of the CDH23 gene for cadherin related 23, a novel gene and one CpG island, complete sequence Length = 180745 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 gagctaggcttggaggtg 35 |||||||||||||||||| Sbjct: 55095 gagctaggcttggaggtg 55078
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 143768 tcttcttcttctctagcg 143785
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 tcttcttcttctctagcgagct 22 ||||||||||||| |||||||| Sbjct: 142267 tcttcttcttctccagcgagct 142246
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tcttcttcttctctagcg 18 |||||||||||||||||| Sbjct: 17901 tcttcttcttctctagcg 17918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,133,600 Number of Sequences: 3902068 Number of extensions: 1133600 Number of successful extensions: 761709 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 761157 Number of HSP's gapped (non-prelim): 552 length of query: 43 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 23 effective length of database: 17,155,003,908 effective search space: 394565089884 effective search space used: 394565089884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)