>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.021
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 18      cgcgtccgcgccgaaaatgtcgc 40
               |||||||||||||||||||||||
Sbjct: 2981916 cgcgtccgcgccgaaaatgtcgc 2981938

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.021
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 18     cgcgtccgcgccgaaaatgtcgc 40
              |||||||||||||||||||||||
Sbjct: 109358 cgcgtccgcgccgaaaatgtcgc 109380

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.021
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 18      cgcgtccgcgccgaaaatgtcgc 40
               |||||||||||||||||||||||
Sbjct: 3954899 cgcgtccgcgccgaaaatgtcgc 3954921

>gb|AE012538.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 446
            of 460 of the complete genome
          Length = 10676

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 27   gccgaaaatgtcgcctccggc 47
            |||||||||||||||||||||
Sbjct: 2920 gccgaaaatgtcgcctccggc 2900

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 27      gccgaaaatgtcgcctccggc 47
               |||||||||||||||||||||
Sbjct: 4995652 gccgaaaatgtcgcctccggc 4995632

>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
            complete genome; segment 10/10
          Length = 140057

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   ccggcaccatgccagctcct 62
            ||||||||||||||||||||
Sbjct: 8877 ccggcaccatgccagctcct 8858

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      ccggcaccatgccagctcct 62
               ||||||||||||||||||||
Sbjct: 3178222 ccggcaccatgccagctcct 3178203

>ref|XM_419679.1| PREDICTED: Gallus gallus similar to Nesprin 1 (Nuclear envelope
            spectrin repeat protein 1) (Synaptic nuclear envelope
            protein 1) (Syne-1) (Myocyte nuclear envelope protein 1)
            (Myne-1) (Enaptin) (LOC421640), mRNA
          Length = 27767

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 51   atgccagctcctcggcgctgaga 73
            |||||||||||||| ||||||||
Sbjct: 8922 atgccagctcctcgccgctgaga 8944

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     ccagctcctcggcgctgag 72
              |||||||||||||||||||
Sbjct: 484114 ccagctcctcggcgctgag 484096

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 22      tccgcgccgaaaatgtcgc 40
               |||||||||||||||||||
Sbjct: 4358746 tccgcgccgaaaatgtcgc 4358764

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 18      cgcgtccgcgccgaaaatgtcgc 40
               ||||||||||||||| |||||||
Sbjct: 3650435 cgcgtccgcgccgaagatgtcgc 3650457


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 532,423
Number of Sequences: 3902068
Number of extensions: 532423
Number of successful extensions: 39583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39238
Number of HSP's gapped (non-prelim): 345
length of query: 113
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 92
effective length of database: 17,151,101,840
effective search space: 1577901369280
effective search space used: 1577901369280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)