ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6 146 1e-35
2RS6B_ARATH (P51430) 40S ribosomal protein S6-2 143 9e-35
3RS6A_ARATH (O48549) 40S ribosomal protein S6-1 143 9e-35
4RS6_RAT (P62755) 40S ribosomal protein S6 115 2e-26
5RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33) 115 2e-26
6RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33) 115 2e-26
7RS6_ICTPU (Q90YR8) 40S ribosomal protein S6 114 8e-26
8RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6 112 2e-25
9RS6_XENLA (P39017) 40S ribosomal protein S6 112 2e-25
10RS6_CHICK (P47838) 40S ribosomal protein S6 112 2e-25
11RS6_APLCA (Q9BMX5) 40S ribosomal protein S6 112 3e-25
12RS6_CANGA (Q6FJH3) 40S ribosomal protein S6 111 5e-25
13RS6_KLULA (Q6CM04) 40S ribosomal protein S6 110 1e-24
14RS6_BRAFL (O01727) 40S ribosomal protein S6 109 2e-24
15RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9) 107 6e-24
16RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6 107 6e-24
17RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6 107 6e-24
18RS6_AEDAE (Q9U761) 40S ribosomal protein S6 107 6e-24
19RS6_AEDAL (Q9U762) 40S ribosomal protein S6 107 6e-24
20RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10) 107 7e-24
21RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B 106 2e-23
22RS6A_SCHPO (P05752) 40S ribosomal protein S6-A 106 2e-23
23RS6_MANSE (Q94624) 40S ribosomal protein S6 105 3e-23
24RS6_DROME (P29327) 40S ribosomal protein S6 105 4e-23
25RS6_YARLI (Q6C169) 40S ribosomal protein S6 103 8e-23
26RS6_SPOFR (Q95V32) 40S ribosomal protein S6 103 1e-22
27RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6 102 2e-22
28RS6_LEIMA (Q9NE83) 40S ribosomal protein S6 79 3e-15
29RS6_LEIIN (O44012) 40S ribosomal protein S6 76 2e-14
30RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment) 69 2e-12
31RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6 61 6e-10
32RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e 54 8e-08
33RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e 54 1e-07
34RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e 52 3e-07
35RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e 52 3e-07
36RS6E_PYRHO (O58349) 30S ribosomal protein S6e 48 7e-06
37RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e 47 1e-05
38RS6E_METTH (O26360) 30S ribosomal protein S6e 46 2e-05
39RS6E_METJA (P54067) 30S ribosomal protein S6e 46 2e-05
40RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e 40 0.001
41RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e 40 0.002
42RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e 39 0.004
43RS6E_METMA (Q8PU79) 30S ribosomal protein S6e 38 0.006
44RS6E_ARCFU (O29739) 30S ribosomal protein S6e 37 0.012
45RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e 37 0.012
46RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e 37 0.016
47RS6E_SULSO (Q980A6) 30S ribosomal protein S6e 33 0.18
48RS6E_SULTO (Q975N7) 30S ribosomal protein S6e 33 0.18
49RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13) 32 0.40
50CAUP_DROME (P54269) Homeobox protein caupolican 31 0.89
51Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c 30 2.0
52TIG_BDEBA (Q6MH01) Trigger factor (TF) 29 2.6
53CCG8_NEUCR (Q01306) Clock-controlled protein 8 29 3.4
54ZN294_HUMAN (O94822) Zinc finger protein 294 28 4.4
55POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48) 27 9.8
56POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48) 27 9.8
57POLR_TYMV (P10358) RNA replicase polyprotein (EC 2.7.7.48) 27 9.8
58BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch... 27 9.8
59KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu... 27 9.8
60ZN294_MOUSE (Q6A009) Zinc finger protein 294 (Zfp-294) 27 9.8
61CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell ... 27 9.8 
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  146 bits (368), Expect = 1e-35
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MK NIANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEF+GY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQGVLTPGRVRLLL
Sbjct: 61  FPMKQGVLTPGRVRLLL 77
to top
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  143 bits (361), Expect = 9e-35
 Identities = 66/77 (85%), Positives = 72/77 (93%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MK N+ANPTTGCQKK+EIDDDQKLR  +DKR+SQEV GD LGEEF+GY+FKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQGVLTPGRVRLLL
Sbjct: 61  FPMKQGVLTPGRVRLLL 77
to top
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  143 bits (361), Expect = 9e-35
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MK N+ANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEF+GY+FKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQGVLTPGRVRLLL
Sbjct: 61  FPMKQGVLTPGRVRLLL 77
to top
>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  115 bits (289), Expect = 2e-26
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY 84
to top
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  115 bits (289), Expect = 2e-26
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY 84
to top
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  115 bits (289), Expect = 2e-26
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY 84
to top
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  114 bits (284), Expect = 8e-26
 Identities = 52/84 (61%), Positives = 67/84 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTNGRVRLLLSKGHSCY 84
to top
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  112 bits (281), Expect = 2e-25
 Identities = 52/84 (61%), Positives = 66/84 (78%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL   H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLAKGHSCY 84
to top
>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  112 bits (280), Expect = 2e-25
 Identities = 51/84 (60%), Positives = 67/84 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E++D++KLR  Y+KR++ EV  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY 84
to top
>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  112 bits (280), Expect = 2e-25
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++ +R  Y+KR++ EV  D LGEE++GY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL+  H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY 84
to top
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score =  112 bits (279), Expect = 3e-25
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P TGCQK +E+DD++KLR  YDKRIS E+  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT  RVRLLL   H  +
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCY 84
to top
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score =  111 bits (277), Expect = 5e-25
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNIA P  G QK VE+DD+ ++R  YDKRI QE+ G+ +G+EF+GY FKI GG DKQG
Sbjct: 1   MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVL P RV+LLL   H  +
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY 84
to top
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score =  110 bits (274), Expect = 1e-24
 Identities = 52/84 (61%), Positives = 64/84 (76%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK +EIDD+ ++R  YDKRI QEV G+ +G+EF+GY+FKI GG DKQG
Sbjct: 1   MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVL P RV+LLL   H  +
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY 84
to top
>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score =  109 bits (272), Expect = 2e-24
 Identities = 49/84 (58%), Positives = 66/84 (78%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MK+NI+ P TGCQK +E+DD++KLR  Y+KR+S ++  + LG+E++GY+ +I GG DKQG
Sbjct: 1   MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL   H  +
Sbjct: 61  FPMKQGVLTNGRVRLLLGKGHSCY 84
to top
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score =  107 bits (268), Expect = 6e-24
 Identities = 50/78 (64%), Positives = 62/78 (79%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK  EIDD+ ++R  +DKRI QEV G+ +G+EF+GY+FKI GG DKQG
Sbjct: 1   MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLT 295
           FPMKQGVL P R++LLLT
Sbjct: 61  FPMKQGVLLPTRIKLLLT 78
to top
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score =  107 bits (268), Expect = 6e-24
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK ++I+D+ KLR  Y+KR+ QEV GD +G+EF+GYIF+I GG DKQG
Sbjct: 1   MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGV+ P RV+LLL   H  +
Sbjct: 61  FPMKQGVMHPTRVKLLLAKGHSCY 84
to top
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score =  107 bits (268), Expect = 6e-24
 Identities = 49/77 (63%), Positives = 62/77 (80%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK +E+DD+ ++R  YDKRI QEV G+ +G+EF+GY+FKI GG DKQG
Sbjct: 1   MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQGVL P RV+LL+
Sbjct: 61  FPMKQGVLLPTRVKLLM 77
to top
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score =  107 bits (268), Expect = 6e-24
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLN++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E++GY+FKI GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT  RVRLLL   H  +
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY 84
to top
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score =  107 bits (268), Expect = 6e-24
 Identities = 51/84 (60%), Positives = 62/84 (73%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLN++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E++GY+FKI GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT  RVRLLL   H  +
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY 84
to top
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score =  107 bits (267), Expect = 7e-24
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK VEIDD+ ++R  YDKRI QEV G+ +G+EF+GY+FKI GG DKQG
Sbjct: 1   MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQGVL P RV+LL+
Sbjct: 61  FPMKQGVLLPTRVKLLM 77
to top
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score =  106 bits (264), Expect = 2e-23
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+FKI GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAH 304
           FPM QGVL P RVRLLL   H
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGH 81
to top
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score =  106 bits (264), Expect = 2e-23
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNI+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+FKI GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAH 304
           FPM QGVL P RVRLLL   H
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGH 81
to top
>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score =  105 bits (262), Expect = 3e-23
 Identities = 48/84 (57%), Positives = 63/84 (75%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+  EV  DLLG+E++GY+ ++ GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT  RVRLL++  H  +
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY 84
to top
>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score =  105 bits (261), Expect = 4e-23
 Identities = 50/84 (59%), Positives = 62/84 (73%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+ Q V  D+LG+E++GY  +I GG DKQG
Sbjct: 1   MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT GRVRLLL   H  +
Sbjct: 61  FPMKQGVLTHGRVRLLLKKGHSCY 84
to top
>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score =  103 bits (258), Expect = 8e-23
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLNIA P  G QK ++I+D+ ++R  Y+KR+ QEV  D LG+EF+GY+ KI GG DKQG
Sbjct: 1   MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLT 295
           FPMKQGV+ P RVRLLL+
Sbjct: 61  FPMKQGVMHPTRVRLLLS 78
to top
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score =  103 bits (257), Expect = 1e-22
 Identities = 48/84 (57%), Positives = 62/84 (73%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+  EV  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLLTGAHLAF 313
           FPMKQGVLT  RVRLL++  H  +
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY 84
to top
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score =  102 bits (254), Expect = 2e-22
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           M+LN A P TG QK  E+D+++KLR  ++KR+SQEV  D LG+E++GY+ +I GG DKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 242 FPMKQGVLTPGRVRLLL 292
           FPMKQG+LT GRVRLLL
Sbjct: 61  FPMKQGILTNGRVRLLL 77
to top
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 238
           MKLNIA P  G  K+ EI D+   R  L D R+  EV G + G EF+GYIF++ GG DK 
Sbjct: 1   MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 239 GFPMKQGVLTPGRVRLLLTGAHLAFVTW 322
           GFPM  GVL   RV LL+    + F T+
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTF 88
to top
>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 238
           M LNIA P  G  K+ EI D+   R  L D R+  EV G + G EF+GYIF++ GG DK 
Sbjct: 1   MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 239 GFPMKQGVLTPGRVRLLLTGAHLAFVTW 322
           GFPM  GVL   RV LL+    + F T+
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTF 88
to top
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score = 68.6 bits (166), Expect(2) = 2e-12
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +2

Query: 197 EGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLL 292
           +GY+FKIMGGCDKQGFPMKQGVLTPGRVRLLL
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL 32



 Score = 20.8 bits (42), Expect(2) = 2e-12
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 292 YRGTSCFR 315
           YRGT CFR
Sbjct: 33  YRGTPCFR 40
to top
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6|
          Length = 203

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = +2

Query: 110 EIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLL 289
           EI+   ++R LYDK+I  +  G +LGEEFEG I +I GG D QGFPM  G LT  RVR L
Sbjct: 3   EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61

Query: 290 LT 295
           L+
Sbjct: 62  LS 63
to top
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e|
          Length = 125

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 211
           T KL I++P TG  K++EI   +    L  KRI  ++        + +L G+EF E    
Sbjct: 3   TFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVKM 61

Query: 212 KIMGGCDKQGFPMKQGVLTPGRVRLLLT 295
           +I GG DK GFPM+  +  P RVR+LL+
Sbjct: 62  EIRGGTDKDGFPMRPDIHGPRRVRILLS 89
to top
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e|
          Length = 130

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = +2

Query: 65  KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 244
           K+ +A+P      +VE+  +     L  KRI   + G+++G    GY  KI GG DK GF
Sbjct: 5   KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61

Query: 245 PMKQGVLTPGRVRLLLTG 298
           PM+  +  P RVRLLL+G
Sbjct: 62  PMRPDIHGPVRVRLLLSG 79
to top
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e|
          Length = 125

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFEGYI-F 211
           T KL I+NP  G  K+VEI   +  + L  +RI +E+        + ++ GEE       
Sbjct: 3   TFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAKL 61

Query: 212 KIMGGCDKQGFPMKQGVLTPGRVRLLLT 295
           KI GG DK GFPM+  V  P RV++LL+
Sbjct: 62  KITGGTDKDGFPMRPDVHGPRRVKILLS 89
to top
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e|
          Length = 125

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 211
           T KL I++P +G  K+VEI   +    L  KRI  ++        + +L G+EF E    
Sbjct: 3   TFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVKL 61

Query: 212 KIMGGCDKQGFPMKQGVLTPGRVRLLLT 295
           +I GG DK GFPM+  +  P RVR+LL+
Sbjct: 62  EIRGGTDKDGFPMRPDIHGPRRVRVLLS 89
to top
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e|
          Length = 125

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEF-EGYIF 211
           T KL I++P +G  K++EI        L  K+I  ++        +  L G++F E    
Sbjct: 3   TFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVKM 61

Query: 212 KIMGGCDKQGFPMKQGVLTPGRVRLLLT 295
           +I GG DK GFPM+  +  P RVR+LL+
Sbjct: 62  EIRGGTDKDGFPMRPDIHGPRRVRILLS 89
to top
>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e|
          Length = 127

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 30/77 (38%), Positives = 40/77 (51%)
 Frame = +2

Query: 74  IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 253
           IA+  TG   K EID +  +  L  +RI  E+ G     E  GY  KI GG    GFPMK
Sbjct: 6   IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62

Query: 254 QGVLTPGRVRLLLTGAH 304
           + +   G+ R+L+T  H
Sbjct: 63  KDLPIAGKKRILITYTH 79
to top
>RS6E_METTH (O26360) 30S ribosomal protein S6e|
          Length = 126

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
 Frame = +2

Query: 104 KVEIDDDQKLRNL-YDKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQG 259
           KV I D +K   +  D   S+ ++G  +G+EF+G       Y  KI GG DK GFPMK+ 
Sbjct: 4   KVVISDKEKSVQMEVDPSESRGLIGLTIGDEFDGSIIGLSGYKLKITGGSDKNGFPMKKT 63

Query: 260 VLTPGRVRLLLTG 298
           V    R+R L++G
Sbjct: 64  VPGARRIRSLVSG 76
to top
>RS6E_METJA (P54067) 30S ribosomal protein S6e|
          Length = 131

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/79 (35%), Positives = 43/79 (54%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 238
           T K  +A+P TG   ++E D+      L  K+I +   G ++G   EGY  +I GG D  
Sbjct: 3   TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIG--LEGYKLQIRGGTDSS 56

Query: 239 GFPMKQGVLTPGRVRLLLT 295
           GFPM+  +    +VR+LL+
Sbjct: 57  GFPMRPDIHGSRKVRVLLS 75
to top
>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e|
          Length = 126

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 23/67 (34%), Positives = 38/67 (56%)
 Frame = +2

Query: 62  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQG 241
           +K+ +++P +G   ++E  + Q L   Y K+I   + G  +G   +GY  KI GG D  G
Sbjct: 7   VKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIG--LDGYELKITGGSDIAG 61

Query: 242 FPMKQGV 262
           FPM++ V
Sbjct: 62  FPMRKEV 68
to top
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e|
          Length = 136

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 26/75 (34%), Positives = 38/75 (50%)
 Frame = +2

Query: 65  KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 244
           K+ +++P  G   +++I D +    L  K I   V G + G    GY  +I GGCD  GF
Sbjct: 5   KVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDGSGF 61

Query: 245 PMKQGVLTPGRVRLL 289
            MK  +  P R R+L
Sbjct: 62  VMKPDLPGPRRQRIL 76
to top
>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e|
          Length = 124

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/74 (31%), Positives = 40/74 (54%)
 Frame = +2

Query: 74  IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 253
           IA+P TG   K EI  + ++ +L  ++I  E+ G     +  GY   + GG    GFPM+
Sbjct: 4   IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60

Query: 254 QGVLTPGRVRLLLT 295
             + T G+ ++L++
Sbjct: 61  SDLQTQGKKQILVS 74
to top
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e|
          Length = 136

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = +2

Query: 65  KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGF 244
           K+ +++P      +++I D +    L  K I   V G + G    GY  +I GGCD  GF
Sbjct: 5   KVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDGSGF 61

Query: 245 PMKQGVLTPGRVRLL 289
            MK  +  P R R+L
Sbjct: 62  VMKPDLPGPRRQRIL 76
to top
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e|
          Length = 129

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +2

Query: 74  IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFP 247
           I++P TG   QK VE         L  K+I   + G ++    + Y  KI GG D+ GFP
Sbjct: 7   ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLPPD-YELKITGGTDRDGFP 62

Query: 248 MKQGVLTPGRVRLLLTG 298
           M+  +    R RLLL+G
Sbjct: 63  MRPDLPGTARRRLLLSG 79
to top
>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e|
          Length = 131

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 24/80 (30%), Positives = 39/80 (48%)
 Frame = +2

Query: 59  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQ 238
           T ++ +A+P +G   + E+D  Q       + I   V G  +G   +GY  +I GG D  
Sbjct: 3   TFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVG--LDGYTVEITGGSDDA 59

Query: 239 GFPMKQGVLTPGRVRLLLTG 298
           G PM++ V     + +LL G
Sbjct: 60  GRPMREDVDGSDLMEVLLEG 79
to top
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e|
          Length = 245

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = +2

Query: 104 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVR 283
           ++ + DD  ++ L    I     G L+G    G  FKI GG D  G PM  GV   GR +
Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192

Query: 284 LLLTG 298
           +LL G
Sbjct: 193 VLLAG 197
to top
>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e|
          Length = 214

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
 Frame = +2

Query: 146 DKRISQEVVGDLLGEEFEG-------YIFKIMGGCDKQGFPMKQGVLTPGRVRLLLTG 298
           D+  +  +VG  +G+ FE           KI GG D  GFPM+  V+   + ++LL+G
Sbjct: 122 DQNKATNLVGLKIGDVFEANQLIGLPVKLKITGGSDNSGFPMRFDVIGAAKRKILLSG 179
to top
>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e|
          Length = 213

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +2

Query: 119 DDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLTG 298
           D  KL N+   +I   +  ++ G   +    KI GG D  GFPM+  V    + +LLL+G
Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDVPGGAKRKLLLSG 178
to top
>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)|
          Length = 128

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +2

Query: 74  IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFEGYIFKIMGGCDKQGFPMK 253
           +++P  G   ++++D  Q       + +  EV G  +G   +GY  ++ GG D  G PM+
Sbjct: 7   VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVG--LDGYSLELTGGSDTSGRPMR 63

Query: 254 QGV 262
             V
Sbjct: 64  PDV 66
to top
>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 1   PPPPHHRSQLAARELAQQLHHEVEHREPHHGV 96
           P   H + QL   +  QQ HH   H  PHH +
Sbjct: 499 PLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSM 530
to top
>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c|
          Length = 163

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +2

Query: 101 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 193
           +KV  D +QK+R+ YD  +S  V+G+L+ +E
Sbjct: 85  EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
to top
>TIG_BDEBA (Q6MH01) Trigger factor (TF)|
          Length = 437

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 18/67 (26%)
 Frame = +2

Query: 50  SNFTMKLNIANPTT-----------GCQKKVEIDDDQK-------LRNLYDKRISQEVVG 175
           SN + KLNI  P             G QK+V I   +K       +++LY  R+ Q+VV 
Sbjct: 9   SNLSRKLNIEVPAAAVQTAFQKIFNGIQKEVTIKGFRKGKAPLATVKSLYGDRVKQDVVQ 68

Query: 176 DLLGEEF 196
           DL+ + +
Sbjct: 69  DLIQKHY 75
to top
>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 4   PPPHHRSQLAARELAQQLHHEVEHREPHHGVP 99
           PP HH+   A +   Q  HH  + ++  H VP
Sbjct: 29  PPQHHQHYEAPQHQQQHQHHHHQQQQQQHPVP 60
to top
>ZN294_HUMAN (O94822) Zinc finger protein 294|
          Length = 1766

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 232  IAATHDLEDIALEFLTQKITNYLLGDSLV 146
            + AT+ +EDI +E + Q  +NY LG  +V
Sbjct: 1635 VMATYTIEDIVIELIIQLPSNYPLGSIIV 1663
to top
>POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 238  LLIAATHD-LEDIALEFLTQKITNYLLGDSL 149
            L+IA   D L+D  L +LT+  T +LLG+SL
Sbjct: 1720 LMIAVDDDALDDRRLSYLTEFTTGHLLGESL 1750
to top
>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 238  LLIAATHD-LEDIALEFLTQKITNYLLGDSL 149
            L+IA   D L+D  L +LT+  T +LLG+SL
Sbjct: 1720 LMIAVDDDALDDRRLSYLTEFTTGHLLGESL 1750
to top
>POLR_TYMV (P10358) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 238  LLIAATHD-LEDIALEFLTQKITNYLLGDSL 149
            L+IA   D L+D  L +LT+  T +LLG+SL
Sbjct: 1720 LMIAVDDDALDDRRLSYLTEFTTGHLLGESL 1750
to top
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 306 RCAPVSRRRTRPGVSTPCFIGKPCLSQPPMI 214
           R A +  + TRP   +P     P L QPPM+
Sbjct: 878 RAAALPPKPTRPPAVSPALAQPPLLPQPPMV 908
to top
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 13  HHRSQLAARELAQQLHHEVEHREPHHGVPE 102
           HH    A  +   Q HH   H E +H  P+
Sbjct: 71  HHHQHQAPHQAPHQAHHHHHHGEVNHQAPQ 100
to top
>ZN294_MOUSE (Q6A009) Zinc finger protein 294 (Zfp-294)|
          Length = 1767

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 232  IAATHDLEDIALEFLTQKITNYLLGDSLV 146
            + AT+ +EDI +E + Q  +NY LG   V
Sbjct: 1636 VMATYTIEDIVIELIIQLPSNYPLGSITV 1664
to top
>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface|
           antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte
           receptor) (Rosette receptor)
          Length = 351

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 1   PPPPHHRSQLAARELAQQLHHEVEHREPHHGVPEEGGDR*RPEAAKPL 144
           PPPP HRSQ A         H V+H +P    P   G +   +   PL
Sbjct: 283 PPPPGHRSQ-APSHRPPPPGHRVQH-QPQKRPPAPSGTQVHQQKGPPL 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,096,183
Number of Sequences: 219361
Number of extensions: 680099
Number of successful extensions: 2468
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top