>V18K_MLVAB (P03400) 18 kDa protein|
          Length = 163

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 41  APPPACSRFQCLCQACPDSGPPCHPSLARPCL 136
           AP  A S   C C+     GP CH  +  P L
Sbjct: 61  APRSAWSALPCPCRTTSSDGPSCHQGMGAPVL 92

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
 Frame = +2

Query: 38   RAPPPACSRFQCLCQA--CPDSGPPCHPSLARPCLRPVG 148
            RA  P C    C+C    CP S P C P     C +  G
Sbjct: 5413 RAENPCCPETVCVCNTTTCPQSLPVCPPGQESICTQEEG 5451

>TOP2A_RAT (P41516) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
            II, alpha isozyme)
          Length = 1526

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 117  LSPDRVSAPSELARDDDDSVFAGNLASAEDAPAST 221
            L P + S   +L  D  DSV A   ASA D PA T
Sbjct: 1365 LKPQKSSTSVDLESDGKDSVPASPGASAADVPAET 1399

>BCSB2_ACEXY (O82860) Cyclic di-GMP-binding protein precursor (Cellulose|
           synthase regulatory subunit) (Cellulose synthase protein
           B) (CDGBP)
          Length = 802

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = +2

Query: 14  ASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRP 142
           A+  AS   AP PA S    L  A P + PP   S A P   P
Sbjct: 18  AAPVASKAPAPQPAGSDLPPLPAAPPQAAPPAAASAAPPATTP 60

>SLIT2_MOUSE (Q9R1B9) Slit homolog 2 protein precursor (Slit-2) [Contains: Slit|
            homolog 2 protein N-product; Slit homolog 2 protein
            C-product]
          Length = 1521

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -1

Query: 278  LGRSGVHGEVIPVDQAETNC----GSGGVLC 198
            LG   VHG  +P++    +C    G GGVLC
Sbjct: 1368 LGNKCVHGTCLPINAFSYSCKCLEGHGGVLC 1398

>TRH_ONCNE (Q8QFQ9) Thyroliberin type A precursor [Contains: Prothyroliberin|
           type A; Thyroliberin (Thyrotropin-releasing hormone)
           (TRH) (Thyrotropin-releasing factor) (TRF)
           (TSH-releasing factor) (Protirelin)]
          Length = 258

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 279 ARPQWRSRRSHPGGPSGNELWKRGRPLQKQ 190
           ++P+W  +R HPG     EL KR  P +++
Sbjct: 69  SQPEWLVKRQHPGKRYQEELEKRQHPGKRE 98

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +2

Query: 11  GASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVGTSP 157
           G+   +SP R PP A        +A P + P   P  A P   P   SP
Sbjct: 4   GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASP 52

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +2

Query: 44  PPPACSRF---QCLCQACPDSGPPCHPSLARPCLRPVGT 151
           PPP C+     +C  +  P   P C P  + PC  PV +
Sbjct: 12  PPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSS 50

>KELC_DROME (Q04652) Ring canal kelch protein [Contains: Kelch short protein]|
          Length = 1477

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 90  QTQALLATPLSPDRVSAPSELARDDDDSVFAGNLASAEDAPASTVRFRLVHRDDFSVN 263
           Q Q   A P  P R+   +    D  D   AG + SA D P + VR  L +R +F ++
Sbjct: 827 QQQQQQAQPQQPQRILPMNNYRNDLYDRSAAGGVCSAYDVPRA-VRSGLGYRRNFRID 883

>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 86   CPDSGPPCHPSLARPCLRPVGTSP 157
            C  +  PCHP++  P   P G +P
Sbjct: 1135 CGPASTPCHPNIGLPTENPQGAAP 1158

>HIS5_MYCPA (P60600) Imidazole glycerol phosphate synthase subunit hisH (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH) (ImGP synthase
           subunit hisH) (IGPS subunit hisH)
          Length = 206

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 132 HGRAREGWQGGPESGQAWQRH 70
           H  A + W+G PE+   W RH
Sbjct: 148 HSYAAQQWEGSPEAVLTWSRH 168

>SLIT2_HUMAN (O94813) Slit homolog 2 protein precursor (Slit-2) [Contains: Slit|
            homolog 2 protein N-product; Slit homolog 2 protein
            C-product]
          Length = 1529

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -1

Query: 278  LGRSGVHGEVIPVDQAETNC----GSGGVLC 198
            LG   VHG  +P++    +C    G GGVLC
Sbjct: 1376 LGNKCVHGTCLPINAFSYSCKCLEGHGGVLC 1406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,944,546
Number of Sequences: 219361
Number of extensions: 616380
Number of successful extensions: 2505
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2496
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)