ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472839.1| Oryza sativa (japonica cultivar-group), predic... 135 1e-28
2emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 135 1e-28
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
4gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.5
5ref|NM_191844.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
6ref|NM_187099.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
7gb|AY552325.1| Didelphis virginiana insulin-like growth factor 2... 42 1.5
8ref|XM_952250.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
9ref|XM_326306.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
10gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.5
11emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 42 1.5
12gb|AY163863.1| Pseudomonas chlororaphis phytochrome-like protein... 42 1.5
13gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.5
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.5
19emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
20ref|XM_515178.1| PREDICTED: Pan troglodytes similar to KIAA0153 ... 40 5.9
21gb|BT017916.1| Zea mays clone EL01N0518G04.c mRNA sequence 40 5.9
22gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome... 40 5.9
23gb|AY659256.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.9
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
25gb|BC001070.2| Homo sapiens tubulin tyrosine ligase-like family,... 40 5.9
26emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 ... 40 5.9
27gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 5.9
28emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
29emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.9
30emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.9
31emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 5.9
32ref|NM_015140.2| Homo sapiens tubulin tyrosine ligase-like famil... 40 5.9
33emb|CR601017.1| full-length cDNA clone CS0DC010YB17 of Neuroblas... 40 5.9
34emb|CR597138.1| full-length cDNA clone CS0DJ006YK03 of T cells (... 40 5.9
35emb|CR593557.1| full-length cDNA clone CS0DC029YA17 of Neuroblas... 40 5.9
36dbj|D63487.1| Homo sapiens mRNA for KIAA0153 gene, partial cds 40 5.9
37gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.9
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
39gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 40 5.9
40gb|AE004808.1| Pseudomonas aeruginosa PAO1, section 369 of 529 o... 40 5.9
41emb|AL590888.1|HS26I142B Novel human mRNA from chromosome 22; sp... 40 5.9
42emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.9
43emb|CT841516.1| Homo sapiens dJ526I14.2 full length open reading... 40 5.9
44emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 5.9 
>ref|XM_472839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1449

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                       
Query: 84  ttcaggcgctgggcggatctgccggcggacctcctctgccgcatcggcgacagcctcgac 143
           ||||||||||||||||| |||||| ||||||| || |||||| |||||||||| || |||
Sbjct: 10  ttcaggcgctgggcggacctgccgccggacctgctgtgccgcgtcggcgacaggctggac 69

                                                                       
Query: 144 ctcaagtgctacgccagcgcgcggggcgcctgcacggcctggcgctgcgcgctctcgccg 203
           ||||||||||||||||||||||| || || |||||||| ||||| |  ||||| ||||||
Sbjct: 70  ctcaagtgctacgccagcgcgcgcggggcgtgcacggcgtggcggtcggcgctgtcgccg 129

                               
Query: 204 ccgtccccgtcgctcctcgt 223
            |||| ||| ||||||||||
Sbjct: 130 gcgtcgccggcgctcctcgt 149



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                       
Query: 304 cggggggccgatgcgtcggctccagcaacggctggctcgccctctccgtctgcctcttcg 363
           |||||||| |||||||||| ||||||||||| ||||||| ||| ||| ||   |||| ||
Sbjct: 227 cggggggcagatgcgtcgggtccagcaacgggtggctcgtcctgtccatcgcgctctacg 286

                                                                       
Query: 364 gcggccagagcatgttcagcctcttcaaccccatcaccgctacggagatccttctgccgc 423
           |||| ||||||  ||||   |||||||||||||||||| | ||||||||| | || ||||
Sbjct: 287 gcgggcagagcgcgttcgtgctcttcaaccccatcaccaccacggagatcgtcctcccgc 346

                            
Query: 424 cgctgatctacgagagc 440
           | |||||||||||||||
Sbjct: 347 ccctgatctacgagagc 363
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 84    ttcaggcgctgggcggatctgccggcggacctcctctgccgcatcggcgacagcctcgac 143
             ||||||||||||||||| |||||| ||||||| || |||||| |||||||||| || |||
Sbjct: 49821 ttcaggcgctgggcggacctgccgccggacctgctgtgccgcgtcggcgacaggctggac 49762

                                                                         
Query: 144   ctcaagtgctacgccagcgcgcggggcgcctgcacggcctggcgctgcgcgctctcgccg 203
             ||||||||||||||||||||||| || || |||||||| ||||| |  ||||| ||||||
Sbjct: 49761 ctcaagtgctacgccagcgcgcgcggggcgtgcacggcgtggcggtcggcgctgtcgccg 49702

                                 
Query: 204   ccgtccccgtcgctcctcgt 223
              |||| ||| ||||||||||
Sbjct: 49701 gcgtcgccggcgctcctcgt 49682



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 115/137 (83%)
 Strand = Plus / Minus

                                                                         
Query: 304   cggggggccgatgcgtcggctccagcaacggctggctcgccctctccgtctgcctcttcg 363
             |||||||| |||||||||| ||||||||||| ||||||| ||| ||| ||   |||| ||
Sbjct: 49604 cggggggcagatgcgtcgggtccagcaacgggtggctcgtcctgtccatcgcgctctacg 49545

                                                                         
Query: 364   gcggccagagcatgttcagcctcttcaaccccatcaccgctacggagatccttctgccgc 423
             |||| ||||||  ||||   |||||||||||||||||| | ||||||||| | || ||||
Sbjct: 49544 gcgggcagagcgcgttcgtgctcttcaaccccatcaccaccacggagatcgtcctcccgc 49485

                              
Query: 424   cgctgatctacgagagc 440
             | |||||||||||||||
Sbjct: 49484 ccctgatctacgagagc 49468
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 84       ttcaggcgctgggcggatctgccggcggacctcctctgccgcatcggcgacagcctcgac 143
                ||||||||||||||||| |||||| ||||||| || |||||| |||||||||| || |||
Sbjct: 23607140 ttcaggcgctgggcggacctgccgccggacctgctgtgccgcgtcggcgacaggctggac 23607081

                                                                            
Query: 144      ctcaagtgctacgccagcgcgcggggcgcctgcacggcctggcgctgcgcgctctcgccg 203
                ||||||||||||||||||||||| || || |||||||| ||||| |  ||||| ||||||
Sbjct: 23607080 ctcaagtgctacgccagcgcgcgcggggcgtgcacggcgtggcggtcggcgctgtcgccg 23607021

                                    
Query: 204      ccgtccccgtcgctcctcgt 223
                 |||| ||| ||||||||||
Sbjct: 23607020 gcgtcgccggcgctcctcgt 23607001



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 115/137 (83%)
 Strand = Plus / Minus

                                                                            
Query: 304      cggggggccgatgcgtcggctccagcaacggctggctcgccctctccgtctgcctcttcg 363
                |||||||| |||||||||| ||||||||||| ||||||| ||| ||| ||   |||| ||
Sbjct: 23606923 cggggggcagatgcgtcgggtccagcaacgggtggctcgtcctgtccatcgcgctctacg 23606864

                                                                            
Query: 364      gcggccagagcatgttcagcctcttcaaccccatcaccgctacggagatccttctgccgc 423
                |||| ||||||  ||||   |||||||||||||||||| | ||||||||| | || ||||
Sbjct: 23606863 gcgggcagagcgcgttcgtgctcttcaaccccatcaccaccacggagatcgtcctcccgc 23606804

                                 
Query: 424      cgctgatctacgagagc 440
                | |||||||||||||||
Sbjct: 23606803 ccctgatctacgagagc 23606787



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 190      gcgcgctctcgccgccgtccccgtc 214
                ||||||||||||||||||| |||||
Sbjct: 24762532 gcgcgctctcgccgccgtcgccgtc 24762508



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      ctctcgccgccgtccccgtc 214
                ||||||||||||||||||||
Sbjct: 15587924 ctctcgccgccgtccccgtc 15587905
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 196     tctcgccgccgtccccgtcgctcct 220
               |||||||||||||| ||||||||||
Sbjct: 2127617 tctcgccgccgtcctcgtcgctcct 2127593



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    ctcgccgccgtccccgtcgctcct 220
              ||||||||||||| ||||||||||
Sbjct: 589217 ctcgccgccgtcctcgtcgctcct 589240



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 196    tctcgccgccgtccccgtcgctcc 219
              |||||||||||||| |||||||||
Sbjct: 281970 tctcgccgccgtcctcgtcgctcc 281993
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>ref|NM_191844.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 309

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 tcgccgccgtccccgtcgctc 218
           |||||||||||||||||||||
Sbjct: 206 tcgccgccgtccccgtcgctc 186
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>ref|NM_187099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 789

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 200 gccgccgtccccgtcgctcct 220
           |||||||||||||||||||||
Sbjct: 405 gccgccgtccccgtcgctcct 385
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>gb|AY552325.1| Didelphis virginiana insulin-like growth factor 2 (IGF2) gene,
           complete cds
          Length = 9584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 339 ctcgccctctccgtctgcctc 359
           |||||||||||||||||||||
Sbjct: 851 ctcgccctctccgtctgcctc 871
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>ref|XM_952250.1| Neurospora crassa OR74A hypothetical protein (NCU06452.1) partial
           mRNA
          Length = 1131

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 213 tcgctcctcgtcgtccttgacgacg 237
           |||||||||| ||||||||||||||
Sbjct: 279 tcgctcctcggcgtccttgacgacg 255
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>ref|XM_326306.1| Neurospora crassa OR74A hypothetical protein (NCU06452.1) partial
           mRNA
          Length = 1131

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 213 tcgctcctcgtcgtccttgacgacg 237
           |||||||||| ||||||||||||||
Sbjct: 279 tcgctcctcggcgtccttgacgacg 255
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   aacggctggctcgccctctcc 350
             |||||||||||||||||||||
Sbjct: 10143 aacggctggctcgccctctcc 10123
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>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
             novel genes, the 5' end of a novel gene, a novel
             pseudogene and seven CpG islands, complete sequence
          Length = 165696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 378   ttcagcctcttcaaccccatc 398
             |||||||||||||||||||||
Sbjct: 61678 ttcagcctcttcaaccccatc 61658
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>gb|AY163863.1| Pseudomonas chlororaphis phytochrome-like protein-like gene,
           partial sequence
          Length = 1146

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 169 gcgcctgcacggcctggcgct 189
           |||||||||||||||||||||
Sbjct: 982 gcgcctgcacggcctggcgct 962
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 243     tgtcgcccctccgccgcctcg 263
               |||||||||||||||||||||
Sbjct: 2234413 tgtcgcccctccgccgcctcg 2234433
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 200      gccgccgtccccgtcgctcct 220
                |||||||||||||||||||||
Sbjct: 15383266 gccgccgtccccgtcgctcct 15383246
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 198      tcgccgccgtccccgtcgctc 218
                |||||||||||||||||||||
Sbjct: 30275769 tcgccgccgtccccgtcgctc 30275749
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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   tcgccgccgtccccgtcgctc 218
             |||||||||||||||||||||
Sbjct: 64088 tcgccgccgtccccgtcgctc 64068
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   gccgccgtccccgtcgctcct 220
             |||||||||||||||||||||
Sbjct: 90265 gccgccgtccccgtcgctcct 90245
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 182     ctggcgctgcgcgctctcgccgccg 206
               |||||||||| ||||||||||||||
Sbjct: 1480138 ctggcgctgctcgctctcgccgccg 1480162
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
             complete sequence
          Length = 170765

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 190   gcgcgctctcgccgccgtccccgtc 214
             ||||||||||||||||||| |||||
Sbjct: 24248 gcgcgctctcgccgccgtcgccgtc 24224
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>ref|XM_515178.1| PREDICTED: Pan troglodytes similar to KIAA0153 protein (LOC458888),
            mRNA
          Length = 3987

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 173  ctgcacggcctggcgctgcgcgct 196
            |||||||||| |||||||||||||
Sbjct: 1231 ctgcacggcccggcgctgcgcgct 1254
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>gb|BT017916.1| Zea mays clone EL01N0518G04.c mRNA sequence
          Length = 1433

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 cgccgccgtccccgtcgctcctcg 222
           |||||||||| |||||||||||||
Sbjct: 221 cgccgccgtcaccgtcgctcctcg 244
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>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence
          Length = 222399

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   agatccttctgccgccgctg 428
             ||||||||||||||||||||
Sbjct: 43359 agatccttctgccgccgctg 43340
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>gb|AY659256.1| Synthetic construct Peudomonas aeruginosa clone FLH041907.01F
           PA3913 gene, partial cds
          Length = 996

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gctacgccagcgcgcggggcgcct 174
           ||||||||||||||| ||||||||
Sbjct: 881 gctacgccagcgcgccgggcgcct 904
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 250      cctccgccgcctcgctcccc 269
                ||||||||||||||||||||
Sbjct: 27449780 cctccgccgcctcgctcccc 27449799
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>gb|BC001070.2| Homo sapiens tubulin tyrosine ligase-like family, member 12, mRNA
           (cDNA clone MGC:2635 IMAGE:3504490), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 126 ctgcacggcccggcgctgcgcgct 149
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>emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 on chromosome 22, complete
             sequence
          Length = 129389

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   ctgcacggcctggcgctgcgcgct 196
             |||||||||| |||||||||||||
Sbjct: 41421 ctgcacggcccggcgctgcgcgct 41398
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    cggctccagcaacggctggc 339
              ||||||||||||||||||||
Sbjct: 134655 cggctccagcaacggctggc 134674
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>emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1159F04, complete
             sequence
          Length = 158330

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ctctcgccgccgtccccgtc 214
             ||||||||||||||||||||
Sbjct: 47981 ctctcgccgccgtccccgtc 47962
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    gcgcctgcacggcctggcgc 188
              ||||||||||||||||||||
Sbjct: 154445 gcgcctgcacggcctggcgc 154464
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   gcgcctgcacggcctggcgc 188
             ||||||||||||||||||||
Sbjct: 77499 gcgcctgcacggcctggcgc 77518
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gccgatgcgtcggctccagc 329
              ||||||||||||||||||||
Sbjct: 300766 gccgatgcgtcggctccagc 300747
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>ref|NM_015140.2| Homo sapiens tubulin tyrosine ligase-like family, member 12
           (TTLL12), mRNA
          Length = 3353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 132 ctgcacggcccggcgctgcgcgct 155
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>emb|CR601017.1| full-length cDNA clone CS0DC010YB17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 124 ctgcacggcccggcgctgcgcgct 147
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>emb|CR597138.1| full-length cDNA clone CS0DJ006YK03 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 2495

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 157 ctgcacggcccggcgctgcgcgct 180
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>emb|CR593557.1| full-length cDNA clone CS0DC029YA17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2617

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 141 ctgcacggcccggcgctgcgcgct 164
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>dbj|D63487.1| Homo sapiens mRNA for KIAA0153 gene, partial cds
          Length = 3394

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 84  ctgcacggcccggcgctgcgcgct 107
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     cctggcgctgcgcgctctcg 200
               ||||||||||||||||||||
Sbjct: 2597624 cctggcgctgcgcgctctcg 2597643
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 250      cctccgccgcctcgctcccc 269
                ||||||||||||||||||||
Sbjct: 27541103 cctccgccgcctcgctcccc 27541122
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
              sequence
          Length = 123406

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    cctccgccgcctcgctcccc 269
              ||||||||||||||||||||
Sbjct: 100734 cctccgccgcctcgctcccc 100715
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>gb|AE004808.1| Pseudomonas aeruginosa PAO1, section 369 of 529 of the complete
            genome
          Length = 10280

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 151  gctacgccagcgcgcggggcgcct 174
            ||||||||||||||| ||||||||
Sbjct: 9313 gctacgccagcgcgccgggcgcct 9290
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>emb|AL590888.1|HS26I142B Novel human mRNA from chromosome 22; splice variant of D63487 Human
           mRNA for KIAA0153 gene, partial cds
          Length = 631

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 100 ctgcacggcccggcgctgcgcgct 123
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     cggctccagcaacggctggc 339
               ||||||||||||||||||||
Sbjct: 1578685 cggctccagcaacggctggc 1578704
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>emb|CT841516.1| Homo sapiens dJ526I14.2 full length open reading frame (ORF) cDNA
           clone (cDNA clone C22ORF:pGEM.dJ526I14.2.V2)
          Length = 1974

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 ctgcacggcctggcgctgcgcgct 196
           |||||||||| |||||||||||||
Sbjct: 103 ctgcacggcccggcgctgcgcgct 126
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   tcagcctcttcaaccccatc 398
             ||||||||||||||||||||
Sbjct: 69260 tcagcctcttcaaccccatc 69279


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,507,283
Number of Sequences: 3902068
Number of extensions: 2507283
Number of successful extensions: 54401
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53659
Number of HSP's gapped (non-prelim): 742
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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