ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
2dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
3dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
5dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
6dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
7dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
8dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
9dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
10gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full... 46 0.079
11gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.079
12dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.31
13ref|XM_473058.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
14gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
15emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.2
16emb|CR709646.2|CNS0GAII Tetraodon nigroviridis full-length cDNA 42 1.2
17emb|CR706798.2|CNS0G8BE Tetraodon nigroviridis full-length cDNA 42 1.2
18emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chro... 42 1.2
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
21dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
22dbj|AK104637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
23dbj|AK072528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
24ref|NM_121646.2| Arabidopsis thaliana transferase AT5G16410 mRNA... 40 4.9
25gb|BT015909.1| Arabidopsis thaliana At5g16410 gene, complete cds 40 4.9
26gb|BT015088.1| Arabidopsis thaliana At5g16410 gene, complete cds 40 4.9
27gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 4.9
28gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 4.9
29emb|BX322662.12| Zebrafish DNA sequence from clone CH211-222C18 ... 40 4.9
30ref|XM_694610.1| PREDICTED: Danio rerio similar to podocan prote... 40 4.9
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
32emb|BX831537.1|CNS0A11M Arabidopsis thaliana Full-length cDNA Co... 40 4.9
33dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
34dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
35emb|AL928887.13| Zebrafish DNA sequence from clone CH211-136O14 ... 40 4.9
36dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.9
37emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 4.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  153 bits (77), Expect = 5e-34
 Identities = 137/157 (87%)
 Strand = Plus / Plus

                                                                           
Query: 183     ctccgacccggccttcttctcgccggacgtcctcaaggccgcgctgtccatggcgctcgt 242
               ||||||| |||| || |||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 4280131 ctccgacgcggcgtttttctcgccggacgtcctcaaggccgccctgtccaaggtgctcgt 4280190

                                                                           
Query: 243     cccgttctacccactcgccggccggctcgcgcaggacgacgcgggacgcccggagatcag 302
               ||| |||||||| ||||||||||| ||||| ||||||  ||| ||  | |||||||||||
Sbjct: 4280191 ccccttctaccccctcgccggccgcctcgctcaggacagcgccggcaggccggagatcag 4280250

                                                    
Query: 303     ctgcagcggcgagggggtcctcttcgtcactgcgcgg 339
               ||||| ||||||||| || ||||||||||| ||||||
Sbjct: 4280251 ctgcaccggcgagggcgtgctcttcgtcacggcgcgg 4280287



 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                           
Query: 48      catggcagtggagatcctcgagtcctgcatggtgacgcccagcgaggcgacgccgaagca 107
               |||||||||||||||| || |||||| |||||||||| || |||||||||||||| ||||
Sbjct: 4279987 catggcagtggagatcgtcaagtcctccatggtgacggccggcgaggcgacgccggagca 4280046

                                                                           
Query: 108     cgcggtgtggctctccaacctcgacctgctggtggccaggggccacacgcccacagtcta 167
               |  | | ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 4280047 caggatatggctctccaacctcgacctgctggtggccaggagccacacccccaccgtcta 4280106

                          
Query: 168     cacctaccggc 178
               |  ||||||||
Sbjct: 4280107 cgtctaccggc 4280117



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 223      gcgctgtccatggcgctcgtcccgttctacccactcgccggccg 266
                |||||| ||| |||||||||||||| |||||| |||||||||||
Sbjct: 29537175 gcgctggccagggcgctcgtcccgtactaccccctcgccggccg 29537132



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 244     ccgttctacccactcgccggccggctcg 271
               ||||||||||| ||||||||||||||||
Sbjct: 4297823 ccgttctacccgctcgccggccggctcg 4297850
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score =  153 bits (77), Expect = 5e-34
 Identities = 137/157 (87%)
 Strand = Plus / Plus

                                                                          
Query: 183    ctccgacccggccttcttctcgccggacgtcctcaaggccgcgctgtccatggcgctcgt 242
              ||||||| |||| || |||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 125352 ctccgacgcggcgtttttctcgccggacgtcctcaaggccgccctgtccaaggtgctcgt 125411

                                                                          
Query: 243    cccgttctacccactcgccggccggctcgcgcaggacgacgcgggacgcccggagatcag 302
              ||| |||||||| ||||||||||| ||||| ||||||  ||| ||  | |||||||||||
Sbjct: 125412 ccccttctaccccctcgccggccgcctcgctcaggacagcgccggcaggccggagatcag 125471

                                                   
Query: 303    ctgcagcggcgagggggtcctcttcgtcactgcgcgg 339
              ||||| ||||||||| || ||||||||||| ||||||
Sbjct: 125472 ctgcaccggcgagggcgtgctcttcgtcacggcgcgg 125508



 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                          
Query: 48     catggcagtggagatcctcgagtcctgcatggtgacgcccagcgaggcgacgccgaagca 107
              |||||||||||||||| || |||||| |||||||||| || |||||||||||||| ||||
Sbjct: 125208 catggcagtggagatcgtcaagtcctccatggtgacggccggcgaggcgacgccggagca 125267

                                                                          
Query: 108    cgcggtgtggctctccaacctcgacctgctggtggccaggggccacacgcccacagtcta 167
              |  | | ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 125268 caggatatggctctccaacctcgacctgctggtggccaggagccacacccccaccgtcta 125327

                         
Query: 168    cacctaccggc 178
              |  ||||||||
Sbjct: 125328 cgtctaccggc 125338



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 244    ccgttctacccactcgccggccggctcg 271
              ||||||||||| ||||||||||||||||
Sbjct: 143044 ccgttctacccgctcgccggccggctcg 143071
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>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full
           insert sequence
          Length = 1500

 Score =  153 bits (77), Expect = 5e-34
 Identities = 137/157 (87%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctccgacccggccttcttctcgccggacgtcctcaaggccgcgctgtccatggcgctcgt 242
           ||||||| |||| || |||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 199 ctccgacgcggcgtttttctcgccggacgtcctcaaggccgccctgtccaaggtgctcgt 258

                                                                       
Query: 243 cccgttctacccactcgccggccggctcgcgcaggacgacgcgggacgcccggagatcag 302
           ||| |||||||| ||||||||||| ||||| ||||||  ||| ||  | |||||||||||
Sbjct: 259 ccccttctaccccctcgccggccgcctcgctcaggacagcgccggcaggccggagatcag 318

                                                
Query: 303 ctgcagcggcgagggggtcctcttcgtcactgcgcgg 339
           ||||| ||||||||| || ||||||||||| ||||||
Sbjct: 319 ctgcaccggcgagggcgtgctcttcgtcacggcgcgg 355



 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Plus

                                                                       
Query: 48  catggcagtggagatcctcgagtcctgcatggtgacgcccagcgaggcgacgccgaagca 107
           |||||||||||||||| || |||||| |||||||||| || |||||||||||||| ||||
Sbjct: 55  catggcagtggagatcgtcaagtcctccatggtgacggccggcgaggcgacgccggagca 114

                                                                       
Query: 108 cgcggtgtggctctccaacctcgacctgctggtggccaggggccacacgcccacagtcta 167
           |  | | ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 115 caggatatggctctccaacctcgacctgctggtggccaggagccacacccccaccgtcta 174

                      
Query: 168 cacctaccggc 178
           |  ||||||||
Sbjct: 175 cgtctaccggc 185
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                          
Query: 77       tggtgacgcccagcgaggcgacgccgaagcacgcggtgtggctctccaacctcgacct 134
                ||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 15201570 tggtggcgccgagcgaggcgacgccgcagcacgcgctgtggctctccaacctcgacct 15201513
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>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1740_D06
          Length = 187410

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 77    tggtgacgcccagcgaggcgacgccgaagcacgcggtgtggctctccaacctcgacct 134
             ||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 95546 tggtggcgccgagcgaggcgacgccgcagcacgcgctgtggctctccaacctcgacct 95489
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>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full
           insert sequence
          Length = 1707

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 77  tggtgacgcccagcgaggcgacgccgaagcacgcggtgtggctctccaacctcgacct 134
           ||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 106 tggtggcgccgagcgaggcgacgccgcagcacgcgctgtggctctccaacctcgacct 163
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>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full
           insert sequence
          Length = 1706

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 77  tggtgacgcccagcgaggcgacgccgaagcacgcggtgtggctctccaacctcgacct 134
           ||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 105 tggtggcgccgagcgaggcgacgccgcagcacgcgctgtggctctccaacctcgacct 162
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 223    gcgctgtccatggcgctcgtcccgttctacccactcgccggccg 266
              |||||| ||| |||||||||||||| |||||| |||||||||||
Sbjct: 101681 gcgctggccagggcgctcgtcccgtactaccccctcgccggccg 101638
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>dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C07, full
           insert sequence
          Length = 1183

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 244 ccgttctacccactcgccggccggctcg 271
           ||||||||||| ||||||||||||||||
Sbjct: 299 ccgttctacccgctcgccggccggctcg 326
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>gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 1587

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 113 tgtggctctccaacctcgacctg 135
           |||||||||||||||||||||||
Sbjct: 111 tgtggctctccaacctcgacctg 133
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 256     ctcgccggccggctcgcgcagga 278
               |||||||||||||||||||||||
Sbjct: 2005824 ctcgccggccggctcgcgcagga 2005846



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 230     ccatggcgctcgtcccgttct 250
               |||||||||||||||||||||
Sbjct: 4140693 ccatggcgctcgtcccgttct 4140713
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 86      ccagcgaggcgacgccgaagcacgcg 111
               |||||||||||||||||||| |||||
Sbjct: 1028673 ccagcgaggcgacgccgaagtacgcg 1028648
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>ref|XM_473058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 234 ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
           ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 201 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 241
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>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12,
             complete sequence
          Length = 102029

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 234   ggcgctcgtcccgttctacccactcgccggccggctc 270
             ||||||||| |  |||||||| |||||||||||||||
Sbjct: 70398 ggcgctcgtacacttctacccgctcgccggccggctc 70434
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 234   ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
             ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 90263 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 90303
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>emb|CR709646.2|CNS0GAII Tetraodon nigroviridis full-length cDNA
          Length = 654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  gctagctctaacagctcagtc 41
           |||||||||||||||||||||
Sbjct: 576 gctagctctaacagctcagtc 596
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>emb|CR706798.2|CNS0G8BE Tetraodon nigroviridis full-length cDNA
          Length = 805

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  gctagctctaacagctcagtc 41
           |||||||||||||||||||||
Sbjct: 727 gctagctctaacagctcagtc 747
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>emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chromosome 9q21.31-22.1
              Contains a ribosomal protein S6 (RPS6) pseudogene, complete
              sequence
          Length = 168324

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     cagctcagtcctcactcatgg 52
              |||||||||||||||||||||
Sbjct: 157754 cagctcagtcctcactcatgg 157734
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 234      ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
                ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 24969678 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 24969718
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 234      ggcgctcgtcccgttctacccactcgccggccggctc 270
                ||||||||| |  |||||||| |||||||||||||||
Sbjct: 14439690 ggcgctcgtacacttctacccgctcgccggccggctc 14439726
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>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full
           insert sequence
          Length = 1827

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 234 ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
           ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 415 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 455
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>dbj|AK104637.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D12, full
           insert sequence
          Length = 1851

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 234 ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
           ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 321 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 361
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>dbj|AK072528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B01, full
           insert sequence
          Length = 1881

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 234 ggcgctcgtcccgttctacccactcgccggccggctcgcgc 274
           ||||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 322 ggcgctcgtgccgttctacccgatggccgggcggctcgcgc 362
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>ref|NM_121646.2| Arabidopsis thaliana transferase AT5G16410 mRNA, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ctctccaacctcgacctgct 137
           ||||||||||||||||||||
Sbjct: 180 ctctccaacctcgacctgct 199
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>gb|BT015909.1| Arabidopsis thaliana At5g16410 gene, complete cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ctctccaacctcgacctgct 137
           ||||||||||||||||||||
Sbjct: 178 ctctccaacctcgacctgct 197
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>gb|BT015088.1| Arabidopsis thaliana At5g16410 gene, complete cds
          Length = 1451

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ctctccaacctcgacctgct 137
           ||||||||||||||||||||
Sbjct: 180 ctctccaacctcgacctgct 199
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 215     tcaaggccgcgctgtccatggcgc 238
               |||||||||||||||||| |||||
Sbjct: 2654515 tcaaggccgcgctgtccaaggcgc 2654492
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>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete
              sequence
          Length = 232462

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    cacgcccacagtctacacct 172
              ||||||||||||||||||||
Sbjct: 152822 cacgcccacagtctacacct 152841
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>emb|BX322662.12| Zebrafish DNA sequence from clone CH211-222C18 in linkage group 23,
              complete sequence
          Length = 209409

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cagctgcagcggcgaggggg 319
              ||||||||||||||||||||
Sbjct: 161488 cagctgcagcggcgaggggg 161469
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>ref|XM_694610.1| PREDICTED: Danio rerio similar to podocan protein (LOC571058), mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 cagctgcagcggcgaggggg 319
           ||||||||||||||||||||
Sbjct: 513 cagctgcagcggcgaggggg 532
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                      
Query: 208    gacgtcctcaaggccgcgctgtccatggcgctcgtcccgttctacccactcgccgg 263
              |||| ||||| |||||||||  ||| ||| |||||||  | |||||||||||||||
Sbjct: 282819 gacgccctcagggccgcgctcgccaaggccctcgtccactactacccactcgccgg 282764
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>emb|BX831537.1|CNS0A11M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH13ZC10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1465

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ctctccaacctcgacctgct 137
           ||||||||||||||||||||
Sbjct: 182 ctctccaacctcgacctgct 201
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 208   gacgtcctcaaggccgcgctgtccatggcgctcgtcccgttctacccactcgccgg 263
             |||| ||||| |||||||||  ||| ||| |||||||  | |||||||||||||||
Sbjct: 34657 gacgccctcagggccgcgctcgccaaggccctcgtccactactacccactcgccgg 34602
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0436E04
          Length = 144644

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                      
Query: 208    gacgtcctcaaggccgcgctgtccatggcgctcgtcccgttctacccactcgccgg 263
              |||| ||||| |||||||||  ||| ||| |||||||  | |||||||||||||||
Sbjct: 124489 gacgccctcagggccgcgctcgccaaggccctcgtccactactacccactcgccgg 124434
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>emb|AL928887.13| Zebrafish DNA sequence from clone CH211-136O14 in linkage group 23,
              complete sequence
          Length = 174456

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    cagctgcagcggcgaggggg 319
              ||||||||||||||||||||
Sbjct: 163105 cagctgcagcggcgaggggg 163124
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>dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4
          Length = 82001

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ctctccaacctcgacctgct 137
             ||||||||||||||||||||
Sbjct: 33918 ctctccaacctcgacctgct 33899
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 235   gcgctcgtcccgttctacccactcgccggccggctcgcgc 274
             |||||||| |||||||||||  | ||||| ||||||||||
Sbjct: 97714 gcgctcgtgccgttctacccgatggccgggcggctcgcgc 97753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,871,949
Number of Sequences: 3902068
Number of extensions: 1871949
Number of successful extensions: 37160
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36618
Number of HSP's gapped (non-prelim): 539
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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