>SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)|
          Length = 416

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 38/101 (37%), Positives = 47/101 (46%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           FDVIVV                    LLLE+FD LH RGSSHGES              M
Sbjct: 9   FDVIVVGAGVMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYYSM 68

Query: 261 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIA 383
           V  + RLW  A+ + GY V  PT   D+GP D  + ++ +A
Sbjct: 69  VSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLSVVA 109

>SOX_MOUSE (Q9D826) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)|
           (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid
           oxidase)
          Length = 390

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 29/94 (30%), Positives = 41/94 (43%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           +D IV+                   VLLLE+F L H RGSSHG+S              M
Sbjct: 8   WDAIVIGAGIQGCFTAYHLAKHSKSVLLLEQFFLPHSRGSSHGQSRIIRKAYPEDFYTMM 67

Query: 261 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGP 362
           ++  ++ W   ER+AG  +   T  L LG ++ P
Sbjct: 68  MKECYQTWAQLEREAGTQLHRQTELLLLGTKENP 101

>MSOX_BACSN (P23342) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)|
          Length = 387

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           FDVIVV                    LL++ FD  H  GS HG++               
Sbjct: 5   FDVIVVGAGSMGMAAGYYLAKQGVKTLLVDSFDPPHTNGSHHGDTRIIRHAYGEGREYVP 64

Query: 261 VRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 374
             L A  LW++ E++  + + T T  L  GP+ G AFV+
Sbjct: 65  FALRAQELWYELEKETHHKIFTQTGVLVYGPKGGSAFVS 103

>MSOX_BACB0 (P40859) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)|
          Length = 390

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           FDVIVV                    LL++ FD  H  GS HG++               
Sbjct: 5   FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVP 64

Query: 261 VRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 374
           + L +  LW++ E++  + + T T  L  GP+   AFVA
Sbjct: 65  LALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVA 103

>SOX_HUMAN (Q9P0Z9) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)|
           (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid
           oxidase)
          Length = 390

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/102 (27%), Positives = 41/102 (40%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           +D IV+                   +LLLE+F L H RGSSHG+S              M
Sbjct: 8   WDAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRM 67

Query: 261 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIAN 386
           +   +++W   E +AG  +   T  L LG ++        AN
Sbjct: 68  MHECYQIWAQLEHEAGTQLHRQTGLLLLGMKENQELKTIQAN 109

>SOX_RABIT (P79371) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)|
           (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid
           oxidase)
          Length = 390

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +3

Query: 156 VLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXMVRLAHRLWHDAERDAGYTVLTPTPH 335
           +LLLE+F L H RGSSHG+S              M+   +++W   E +AG  +   T  
Sbjct: 33  ILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLHRQTGL 92

Query: 336 LDLGPRDGPAFVAAIAN 386
           L LG ++        AN
Sbjct: 93  LLLGMKENQELKTIQAN 109

>MSOX_ARTST (P40873) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)|
          Length = 388

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
 Frame = +3

Query: 72  ERSFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXX 251
           ++ +DVIVV                    LL++ F   H  GS HG++            
Sbjct: 3   KKDYDVIVVGAGSMGMAAGYYLSKQGVKTLLVDSFHPPHTNGSHHGDTRIIRHAYGEGRE 62

Query: 252 XXMVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 374
                L A  LW++ E++  + + T T  L  GP+    FVA
Sbjct: 63  YVPFALRAQELWYELEKETHHKIFTKTGVLVFGPKGEAPFVA 104

>MSOX_STRSB (P40854) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)|
          Length = 388

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
 Frame = +3

Query: 78  SFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX 257
           ++DVIV+                   VL LE+F  +H RGSSHG S              
Sbjct: 3   TYDVIVIGLGGMGSAAAHHLSARGARVLGLEKFGPVHNRGSSHGGSRITRQSYFEDPAYV 62

Query: 258 MVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIANGGASELA 407
            + L A+ L+ + ER  G  V T    +  GP D      ++ +    +LA
Sbjct: 63  PLLLRAYELYEELERATGRNVATLCGGVMAGPPDSRTVSGSLRSATEWDLA 113

>MSOX_STRAW (Q827H4) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)|
          Length = 384

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
 Frame = +3

Query: 78  SFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX 257
           ++DVIV+                   VL LE+F  +H RGSSHG S              
Sbjct: 4   TYDVIVIGLGGMGSAAAHHLSARGARVLGLEKFGPVHNRGSSHGGSRITRQSYFEDPAYV 63

Query: 258 MVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRD 356
            + L ++ L+ + ER  G  V T +  + +G  D
Sbjct: 64  PLLLRSYELYEEVERSTGREVATLSGGVMVGRPD 97

>SOX_CAEEL (Q18006) Putative sarcosine oxidase (EC 1.5.3.1)|
          Length = 384

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 260
           +DV+VV                    LLLE+F+L H+ GSSHG+S              +
Sbjct: 5   YDVVVVGAGIFGSCTAYNCQKIGLKTLLLEQFELGHKNGSSHGKSRITRYAHTEVEYVDL 64

Query: 261 VRLAHRLWHDAERDAG 308
           V  A+    + ER  G
Sbjct: 65  VGDAYNQIFELERIRG 80

>PPIB_NEUCR (Q7S7Z6) Peptidyl-prolyl cis-trans isomerase B precursor (EC|
           5.2.1.8) (PPIase B) (Rotamase B)
          Length = 207

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 306 GYTVLTPTPHLDLGPRDGPAFVAAIANGGASELAPAG 416
           GY V+    +   GPRD PA    IA  G  E+ P G
Sbjct: 166 GYDVVEKIENTKTGPRDAPAEPIKIAKSGELEVPPEG 202

>MTOX_ECO57 (P58523) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)|
          Length = 372

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 257
           +D+I++                   VL+ +     HQ GS HG++               
Sbjct: 3   YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62

Query: 258 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 386
           +V  A  LW D  R +    +   +  ++LGP D  AF+A +A+
Sbjct: 63  LVLRAQTLWDDLSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105

>MTOX_SALTY (P58525) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)|
          Length = 372

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 257
           +D+I++                   VL+ +     HQ+GS HG++               
Sbjct: 3   YDLIIIGSGSVGAAAGYYATRAGLKVLMTDAHMPPHQQGSHHGDTRLIRHAYGEGEKYVP 62

Query: 258 MVRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIA 383
           +V  A  LW +        +   +  ++LGP D  AF+A +A
Sbjct: 63  LVLRAQTLWDELSTHNEEPIFVRSGVVNLGPADS-AFLANVA 103

>MTOX_SHIFL (Q83RT9) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)|
          Length = 372

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 257
           +D+I++                   VL+ +     HQ GS HG++               
Sbjct: 3   YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62

Query: 258 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 386
           +V  A  LW +  R +    +   +  ++LGP D  AF+A +A+
Sbjct: 63  LVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105

>MTOX_ECOL6 (Q8FIR3) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)|
          Length = 372

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
 Frame = +3

Query: 81  FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 257
           +D+I++                   VL+ +     HQ GS HG++               
Sbjct: 3   YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62

Query: 258 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 386
           +V  A  LW +  R +    +   +  ++LGP D  AF+A +A+
Sbjct: 63  LVLRAQMLWDELSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,543,713
Number of Sequences: 219361
Number of extensions: 447808
Number of successful extensions: 1479
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)