ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44d12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1612 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 233 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 234 tccgccgcgaggtccttc 251
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 32341653 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 32341594 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 32341593 tccgccgcgaggtccttc 32341576
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 117485 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 117426 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 117425 tccgccgcgaggtccttc 117408
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 3166 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 3107 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 3106 tccgccgcgaggtccttc 3089
>dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H13, full insert sequence Length = 1612 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 233 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 234 tccgccgcgaggtccttc 251
>dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial phosphate transporter, complete cds Length = 1552 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 67 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 126 ||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||||| Sbjct: 139 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctttacacctcc 198 Query: 127 cccgccgcgcgctccttc 144 |||||||| | |||||| Sbjct: 199 tccgccgcgaggtccttc 216
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 62 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 121 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 5649173 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 5649232 Query: 122 c 122 | Sbjct: 5649233 c 5649233 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccctcctccccgacgccct 178 |||||||||||||||||||| Sbjct: 17594127 cccctcctccccgacgccct 17594146
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 62 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 121 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 41320 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 41379 Query: 122 c 122 | Sbjct: 41380 c 41380
>dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N24, full insert sequence Length = 1410 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 62 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 121 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 79 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 138 Query: 122 c 122 | Sbjct: 139 c 139
>dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transporter, complete cds Length = 1444 Score = 89.7 bits (45), Expect = 4e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 66 ggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctc 125 |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| Sbjct: 45 ggcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacgcctc 104 Query: 126 c 126 | Sbjct: 105 c 105
>gb|AY104226.1| Zea mays PCO060710 mRNA sequence Length = 1639 Score = 85.7 bits (43), Expect = 7e-14 Identities = 52/55 (94%) Strand = Plus / Plus Query: 66 ggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctac 120 |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 137 ggcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctac 191
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 ctcctcccccgccgcgcgctcct 142 ||||||||||||||||||||||| Sbjct: 52403 ctcctcccccgccgcgcgctcct 52381
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 ctcctcccccgccgcgcgctcct 142 ||||||||||||||||||||||| Sbjct: 23422160 ctcctcccccgccgcgcgctcct 23422138
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 ctcctcccccgccgcgcgctcct 142 ||||||||||||||||||||||| Sbjct: 16728293 ctcctcccccgccgcgcgctcct 16728271 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ctctactcctcccccgccgcgcgc 138 |||| ||||||||||||||||||| Sbjct: 5776870 ctctcctcctcccccgccgcgcgc 5776893
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 ctcctcccccgccgcgcgctcct 142 ||||||||||||||||||||||| Sbjct: 23350351 ctcctcccccgccgcgcgctcct 23350329
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Plus Query: 120 ctcctcccccgccgcgcgctcct 142 ||||||||||||||||||||||| Sbjct: 79999 ctcctcccccgccgcgcgctcct 80021
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgc 149 |||||||||||||||||||||| Sbjct: 11672725 ccgccgcgcgctccttcaccgc 11672746 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccgcgcttcccctcctccc 169 |||||||||||||||||||| Sbjct: 33030569 cccgcgcttcccctcctccc 33030588 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cctcccccgccgcgcgctcc 141 |||||||||||||||||||| Sbjct: 6235511 cctcccccgccgcgcgctcc 6235530
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgc 149 |||||||||||||||||||||| Sbjct: 61820 ccgccgcgcgctccttcaccgc 61841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgc 149 |||||||||||||||||||||| Sbjct: 11669488 ccgccgcgcgctccttcaccgc 11669509 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccgcgcttcccctcctccc 169 |||||||||||||||||||| Sbjct: 33121079 cccgcgcttcccctcctccc 33121098 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cctcccccgccgcgcgctcc 141 |||||||||||||||||||| Sbjct: 6234724 cctcccccgccgcgcgctcc 6234743
>ref|NM_194135.2| Oryza sativa (japonica cultivar-group), mRNA Length = 796 Score = 42.1 bits (21), Expect = 0.88 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgcccc 152 ||||||||||||||||| ||||||| Sbjct: 120 ccgccgcgcgctccttctccgcccc 144
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 cgacctctcccgcgactcgct 101 ||||||||||||||||||||| Sbjct: 285209 cgacctctcccgcgactcgct 285229
>gb|AC146254.2| Pan troglodytes BAC clone CH251-128L22 from Y, complete sequence Length = 177240 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agaggagagagagctcagaaa 23 ||||||||||||||||||||| Sbjct: 64217 agaggagagagagctcagaaa 64197
>dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, complete sequence Length = 184689 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agaggagagagagctcagaaa 23 ||||||||||||||||||||| Sbjct: 129859 agaggagagagagctcagaaa 129839
>dbj|BS000552.1| Pan troglodytes chromosome Y clone:PTB-302F24, complete sequences Length = 157728 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 agaggagagagagctcagaaa 23 ||||||||||||||||||||| Sbjct: 80235 agaggagagagagctcagaaa 80255
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 agaggagagagagctcagaaa 23 ||||||||||||||||||||| Sbjct: 18011842 agaggagagagagctcagaaa 18011862
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ggcccggcggcgatggcgctc 78 ||||||||||||||||||||| Sbjct: 23498208 ggcccggcggcgatggcgctc 23498188
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.88 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgcccc 152 ||||||||||||||||| ||||||| Sbjct: 808816 ccgccgcgcgctccttctccgcccc 808840
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ggcccggcggcgatggcgctc 78 ||||||||||||||||||||| Sbjct: 97 ggcccggcggcgatggcgctc 117
>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence Length = 148280 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 agaggagagagagctcagaaa 23 ||||||||||||||||||||| Sbjct: 49772 agaggagagagagctcagaaa 49792
>dbj|AK064629.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F12, full insert sequence Length = 796 Score = 42.1 bits (21), Expect = 0.88 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgcccc 152 ||||||||||||||||| ||||||| Sbjct: 120 ccgccgcgcgctccttctccgcccc 144
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 42.1 bits (21), Expect = 0.88 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 ccgccgcgcgctccttcaccgcccc 152 ||||||||||||||||| ||||||| Sbjct: 7572 ccgccgcgcgctccttctccgcccc 7596
>gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit mRNA, complete cds Length = 2132 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 tcctcccccgccgcgcgctcc 141 ||||||||||||||||||||| Sbjct: 143 tcctcccccgccgcgcgctcc 123
>gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit gene, complete cds Length = 9386 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 tcctcccccgccgcgcgctcc 141 ||||||||||||||||||||| Sbjct: 1381 tcctcccccgccgcgcgctcc 1361
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ggcccggcggcgatggcgctc 78 ||||||||||||||||||||| Sbjct: 54111 ggcccggcggcgatggcgctc 54091
>ref|NM_185041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccgcgcttcccctcctccc 169 |||||||||||||||||||| Sbjct: 18 cccgcgcttcccctcctccc 37
>gb|BC017454.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:20429 IMAGE:4647090), complete cds Length = 1004 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 41 cggcccggcggcgatggcgc 60
>gb|BC022334.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:22779 IMAGE:4703567), complete cds Length = 930 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 23 cggcccggcggcgatggcgc 42
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ctctactcctcccccgccgcgcgc 138 |||| ||||||||||||||||||| Sbjct: 99244 ctctcctcctcccccgccgcgcgc 99267
>ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM01657.1) partial mRNA Length = 5787 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gcgcccggatctctcggccc 62 |||||||||||||||||||| Sbjct: 4126 gcgcccggatctctcggccc 4145
>gb|BC047763.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:6201042), with apparent retained intron Length = 1343 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 30 cggcccggcggcgatggcgc 49
>gb|AC127290.3| Mus musculus BAC clone RP23-364F13 from chromosome 5, complete sequence Length = 187121 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gagagagagctcagaaagca 26 |||||||||||||||||||| Sbjct: 157894 gagagagagctcagaaagca 157875
>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence Length = 209670 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ccccgcgcttcccctcctcc 168 |||||||||||||||||||| Sbjct: 7901 ccccgcgcttcccctcctcc 7920
>gb|BC008183.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:16998 IMAGE:4183256), complete cds Length = 994 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 24 cggcccggcggcgatggcgc 43
>gb|AC144831.2| Homo sapiens chromosome 17, clone XXfos-86664F1, complete sequence Length = 37443 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cgctcctccccagcttcctc 117 |||||||||||||||||||| Sbjct: 35730 cgctcctccccagcttcctc 35711
>gb|BC002516.2| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:3140193), partial cds Length = 907 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 18 cggcccggcggcgatggcgc 37
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ctcggcccggcggcgatggcgctc 78 ||||||||||| |||||||||||| Sbjct: 224856 ctcggcccggccgcgatggcgctc 224833
>dbj|AK094291.1| Homo sapiens cDNA FLJ36972 fis, clone BRACE2006245 Length = 2161 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 838 cggcccggcggcgatggcgc 819
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tcggcccggcggcgatggcgctct 79 |||||||||||||||| ||||||| Sbjct: 37337 tcggcccggcggcgattgcgctct 37360
>ref|NM_014595.1| Homo sapiens 5', 3'-nucleotidase, cytosolic (NT5C), mRNA Length = 970 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>tpg|BK000192.1| TPA: TPA_exp: Homo sapiens cytosolic 5'(3')-deoxyribonucleotidase (NT5C) gene, complete cds Length = 1554 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 21381 cggcccggcggcgatggcgc 21362
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cctcccccgccgcgcgctcc 141 |||||||||||||||||||| Sbjct: 74122 cctcccccgccgcgcgctcc 74141
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cccgcgcttcccctcctccc 169 |||||||||||||||||||| Sbjct: 92739 cccgcgcttcccctcctccc 92720
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cctcccccgccgcgcgctcc 141 |||||||||||||||||||| Sbjct: 48719 cctcccccgccgcgcgctcc 48738
>gb|AF154829.2|AF154829 Homo sapiens deoxy-5'-nucleotidase mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0564B04 Length = 64684 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccctcctccccgacgccct 178 |||||||||||||||||||| Sbjct: 20475 cccctcctccccgacgccct 20494
>dbj|AK120599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F09, full insert sequence Length = 1879 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccctcctccccgacgccct 178 |||||||||||||||||||| Sbjct: 216 cccctcctccccgacgccct 235
>gb|AC007263.4|AC007263 Homo sapiens chromosome 14 clone RP11-79J20 containing gene for checkpoint supporessor 1 (CHES1) gene, partial cds, complete sequence Length = 167390 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ccccgcgcttcccctcctcc 168 |||||||||||||||||||| Sbjct: 33680 ccccgcgcttcccctcctcc 33699
>dbj|AK000419.1| Homo sapiens cDNA FLJ20412 fis, clone KAT02154 Length = 970 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cggcccggcggcgatggcgc 76 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>dbj|AK109922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B12, full insert sequence Length = 1912 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cccgcgcttcccctcctccc 169 |||||||||||||||||||| Sbjct: 58 cccgcgcttcccctcctccc 77
>dbj|AK107170.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G02, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cctcccccgccgcgcgctcc 141 |||||||||||||||||||| Sbjct: 1067 cctcccccgccgcgcgctcc 1086
>dbj|AK103578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P14, full insert sequence Length = 2166 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccctcctccccgacgccct 178 |||||||||||||||||||| Sbjct: 188 cccctcctccccgacgccct 207
>emb|AL157736.3|CNS01RG3 Human chromosome 14 DNA sequence Partial sequence from BAC R-945C20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200542 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ccccgcgcttcccctcctcc 168 |||||||||||||||||||| Sbjct: 42763 ccccgcgcttcccctcctcc 42782
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 ccggcggcgatggcgctctccgac 84 |||||||||||||||||| ||||| Sbjct: 2689174 ccggcggcgatggcgctcgccgac 2689151
>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence Length = 203284 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ccccgcgcttcccctcctcc 168 |||||||||||||||||||| Sbjct: 155540 ccccgcgcttcccctcctcc 155559
>emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-33N16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158838 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ccccgcgcttcccctcctcc 168 |||||||||||||||||||| Sbjct: 44719 ccccgcgcttcccctcctcc 44700 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,781,060 Number of Sequences: 3902068 Number of extensions: 1781060 Number of successful extensions: 65412 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64271 Number of HSP's gapped (non-prelim): 1141 length of query: 267 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 245 effective length of database: 17,147,199,772 effective search space: 4201063944140 effective search space used: 4201063944140 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
