ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44d07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 Score = 539 bits (272), Expect = e-150 Identities = 278/280 (99%) Strand = Plus / Plus Query: 125 tcagcgtcgagcccccggttcctgggcgactccggccgcgtcgggctcgccaagtccacc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcagcgtcgagcccccggttcctgggcgactccggccgcgtcgggctcgccaagtccacc 60 Query: 185 cgccgcgacgtcgccgtccaggccaaggggtcctggctccccggcctccagtcccctgcc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgccgcgacgtcgccgtccaggccaaggggtcctggctccccggcctccagtcccctgcc 120 Query: 245 tacctcgacggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggac 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tacctcgacggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggac 180 Query: 305 ccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctg 240 Query: 365 tgggtggcggagatgctgatcccggaggtgctgaccaagg 404 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 241 ggggtggcggggatgctgatcccggaggtgctgaccaagg 280
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 939 nt] Length = 939 Score = 432 bits (218), Expect = e-118 Identities = 243/250 (97%), Gaps = 1/250 (0%) Strand = Plus / Plus Query: 156 ccggccgcgtcgggctcgccaag-tccacccgccgcgacgtcgccgtccaggccaagggg 214 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 43 ccggccgcgtcgggctcgccaaggtccacccgccgcgacgtcgccgtccaggccaagggg 102 Query: 215 tcctggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaat 274 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 103 tcctggctccccggcctccagtcccctgcctacctagacggcagtctggagggtgacaat 162 Query: 275 ggttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcg 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 ggttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcg 222 Query: 335 gagctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtg 394 || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 223 gacgtggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtg 282 Query: 395 ctgaccaagg 404 |||||||||| Sbjct: 283 ctgaccaagg 292
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 167 bits (84), Expect = 3e-38 Identities = 168/196 (85%) Strand = Plus / Plus Query: 204 aggccaaggggtcctggctccccggcctccagtcccctgcctacctcgacggcagtctgg 263 ||||||||||| |||||||||||||||| || || |||||||| ||||||| || Sbjct: 205 aggccaagggggagtggctccccggcctcccttctcccacctacctcaacggcagcttgc 264 Query: 264 cgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctgcggtggt 323 | || || || || || |||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 265 caggcgataacgggttcgacccgttgggtctggcggaggacccggagaacctgcggtggt 324 Query: 324 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctga 383 ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 325 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgc 384 Query: 384 tcccggaggtgctgac 399 | || ||||||||||| Sbjct: 385 tgcctgaggtgctgac 400
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 210 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 269 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 329 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 330 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 389 Query: 398 ac 399 || Sbjct: 390 ac 391
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 398 ac 399 || Sbjct: 394 ac 395
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 398 ac 399 || Sbjct: 394 ac 395
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1178 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 211 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 270 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 330 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 331 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 390 Query: 398 ac 399 || Sbjct: 391 ac 392
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1188 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 210 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 269 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 329 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 330 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 389 Query: 398 ac 399 || Sbjct: 390 ac 391
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1191 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 213 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 272 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 273 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 332 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 333 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 392 Query: 398 ac 399 || Sbjct: 393 ac 394
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 190 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 249 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 250 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 309 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 310 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 369 Query: 398 ac 399 || Sbjct: 370 ac 371
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 398 ac 399 || Sbjct: 394 ac 395
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 211 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 270 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 330 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 331 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 390 Query: 398 ac 399 || Sbjct: 391 ac 392
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 215 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 274 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 275 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 334 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 335 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 394 Query: 398 ac 399 || Sbjct: 395 ac 396
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 398 ac 399 || Sbjct: 394 ac 395
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 163 bits (82), Expect = 5e-37 Identities = 157/182 (86%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 177 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 236 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 237 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 296 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 297 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 356 Query: 398 ac 399 || Sbjct: 357 ac 358
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 293 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 352 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 439 Query: 353 tgggcgatgctgtgggtggcggagatgctgatcccggaggtgctgac 399 |||||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct: 438 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgac 392
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 293 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 352 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21165033 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 21164974 Query: 353 tgggcgatgctgtgggtggcggagatgctgatcccggaggtgctgac 399 |||||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct: 21164973 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgac 21164927
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 293 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 352 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136243 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 136184 Query: 353 tgggcgatgctgtgggtggcggagatgctgatcccggaggtgctgac 399 |||||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct: 136183 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgac 136137
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 155 bits (78), Expect = 1e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 218 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 277 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 212 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 271 Query: 278 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 337 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 272 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcgggg 331 Query: 338 ctggtgaacgggcggtgggcgatgctgtgggtggcggagatgctgatcccggaggtgctg 397 ||||||||||||||||||||||||||| ||||||| | ||||||| | || ||||||||| Sbjct: 332 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 391 Query: 398 ac 399 || Sbjct: 392 ac 393
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 314 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcg 373 ||||||||||||| ||||||||||||| || || | ||||||||||||||| ||||||| Sbjct: 16234223 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 16234282 Query: 374 gagatgctgatcccggaggtgctg 397 | ||| ||| |||||||||||||| Sbjct: 16234283 gggatcctggtcccggaggtgctg 16234306
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 314 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcg 373 ||||||||||||| ||||||||||||| || || | ||||||||||||||| ||||||| Sbjct: 50739 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 50798 Query: 374 gagatgctgatcccggaggtgctg 397 | ||| ||| |||||||||||||| Sbjct: 50799 gggatcctggtcccggaggtgctg 50822
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 314 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcg 373 ||||||||||||| ||||||||||||| || || | ||||||||||||||| ||||||| Sbjct: 138824 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 138883 Query: 374 gagatgctgatcccggaggtgctg 397 | ||| ||| |||||||||||||| Sbjct: 138884 gggatcctggtcccggaggtgctg 138907
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 314 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcg 373 ||||||||||||| ||||||||||||| || || | ||||||||||||||| ||||||| Sbjct: 346 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 405 Query: 374 gagatgctgatcccggaggtgctg 397 | ||| ||| |||||||||||||| Sbjct: 406 gggatcctggtcccggaggtgctg 429
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) Length = 1013 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 320 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcggagatg 379 |||| ||| ||||||||||| ||||||||| |||||||||||||| | ||||||| |||| Sbjct: 269 tggtacgtccaggcggagctagtgaacgggaggtgggcgatgctgggcgtggcggggatg 328 Query: 380 ctgatcccggaggtgctgacca 401 || |||||||| ||||| |||| Sbjct: 329 cttatcccggaagtgctaacca 350
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) (partial) Length = 968 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 320 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcggagatg 379 |||| ||| ||||||||||| ||||||||| | |||||||||||| | ||||||| |||| Sbjct: 246 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 305 Query: 380 ctgatcccggaggtgctgacca 401 || |||||||| ||||| |||| Sbjct: 306 cttatcccggaagtgctaacca 327
>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein type 4 Length = 819 Score = 69.9 bits (35), Expect = 6e-09 Identities = 70/82 (85%) Strand = Plus / Plus Query: 320 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggcggagatg 379 |||| ||| ||||||||||| ||||||||| | |||||||||||| | ||||||| |||| Sbjct: 277 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 336 Query: 380 ctgatcccggaggtgctgacca 401 | |||||||| ||||| |||| Sbjct: 337 cntatcccggaagtgctaacca 358
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 302 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 361 ||||||||| |||||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 444 gacccggagagcctgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 503 Query: 362 ct 363 || Sbjct: 504 ct 505
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 290 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 349 Query: 361 gctg 364 |||| Sbjct: 350 gctg 353
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 291 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 350 Query: 361 gctg 364 |||| Sbjct: 351 gctg 354
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 293 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 352 Query: 361 gctg 364 |||| Sbjct: 353 gctg 356
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 361 gctg 364 |||| Sbjct: 356 gctg 359
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 361 gctg 364 |||| Sbjct: 356 gctg 359
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 361 gctg 364 |||| Sbjct: 357 gctg 360
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 361 gctg 364 |||| Sbjct: 357 gctg 360
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 300 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 359 Query: 361 gctg 364 |||| Sbjct: 360 gctg 363
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 23304695 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 23304754 Query: 361 gctg 364 |||| Sbjct: 23304755 gctg 23304758 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 22389326 cgacgtcgccgtccaggcca 22389307 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cgccaagtccacccgccgcgacgtcgcc 199 ||||||| || ||||||||||||||||| Sbjct: 7637021 cgccaaggccgcccgccgcgacgtcgcc 7637048
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 59953 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 60012 Query: 361 gctg 364 |||| Sbjct: 60013 gctg 60016
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 311 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 370 Query: 361 gctg 364 |||| Sbjct: 371 gctg 374
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 361 gctg 364 |||| Sbjct: 357 gctg 360
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 361 gctg 364 |||| Sbjct: 357 gctg 360
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 327 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 386 Query: 361 gctg 364 |||| Sbjct: 387 gctg 390
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 293 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 352 Query: 361 gctg 364 |||| Sbjct: 353 gctg 356
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 361 gctg 364 |||| Sbjct: 356 gctg 359
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 290 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 349 Query: 361 gctg 364 |||| Sbjct: 350 gctg 353
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 291 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 350 Query: 361 gctg 364 |||| Sbjct: 351 gctg 354
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 478 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 537 Query: 361 gctg 364 |||| Sbjct: 538 gctg 541
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 301 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 360 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 300 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 359 Query: 361 gctg 364 |||| Sbjct: 360 gctg 363
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 302 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 361 ||||||||| | |||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 321 gacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 380 Query: 362 ctg 364 ||| Sbjct: 381 ctg 383
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 315 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 |||||||| ||||||||||||||||||| || | |||||||||||||| Sbjct: 290 tgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatgct 338
>emb|X57707.1|LECAB12 L.esculentum DNA for Cab12 gene Length = 1493 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 257 agtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctg 316 ||||| |||||||||||||||||||| || ||| || |||||||| |||||| || || Sbjct: 608 agtcttgcgggtgacaatggttttgatccattgggactcgcggaggatccggagaacttg 667 Query: 317 cggtggttcgtgcaggcggagctggtgaacgggcggtgggc 357 | ||||| || ||||| ||||| |||||||| || ||||| Sbjct: 668 agatggtttgttcaggctgagctagtgaacggtcgatgggc 708
>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4) mRNA, complete cds Length = 1266 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 464 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 523 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 524 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 574
>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 891 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 204 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 263 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 264 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 314
>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 1055 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 304 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 363 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 364 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 414
>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 294 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 353 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 354 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 404
>emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 291 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 350 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 351 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 401
>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 278 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 337 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 338 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 388
>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence Length = 1267 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 465 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 524 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 525 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 575
>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding protein (Cab4) mRNA, complete cds Length = 1050 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 253 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 312 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 274 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 333 Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 334 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 384
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Minus Query: 255 gcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacc 314 ||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| || Sbjct: 7689 gcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaact 7630 Query: 315 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgct 363 || |||||||| ||||| |||||||| ||||| || ||||| ||||| Sbjct: 7629 tgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgct 7581
>dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-25I9, complete sequence Length = 167067 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||||||||| ||||| Sbjct: 159312 cacacacacacgcgcgcactctctctctc 159340
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cctgcggtggttcgtgcaggcggagctggtgaacgg 348 ||||||||||| ||||||||| ||||||||| |||| Sbjct: 198 cctgcggtggtacgtgcaggctgagctggtgcacgg 233
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 ccaccacacacacacgcgcgcac 27 ||||||||||||||||||||||| Sbjct: 83489 ccaccacacacacacgcgcgcac 83511
>dbj|AB112468.1| Chlamydomonas reinhardtii iar1 gene for Iar1 InvA related Kinesin, exon 1-23, complete cds Length = 8900 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 299 gaggacccggaggacctgcggtg 321 ||||||||||||||||||||||| Sbjct: 6391 gaggacccggaggacctgcggtg 6413
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 ccacccgccgcgacgtcgccgtccag 205 |||||||||||| ||||||||||||| Sbjct: 301280 ccacccgccgcgtcgtcgccgtccag 301255
>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein (cab11 gene) Length = 1062 Score = 44.1 bits (22), Expect = 0.35 Identities = 46/54 (85%) Strand = Plus / Plus Query: 319 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggc 372 |||||| ||||| || |||||||||||||| || ||||| ||||| ||||||| Sbjct: 381 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 434
>emb|BX511037.9| Zebrafish DNA sequence from clone DKEY-66N24 in linkage group 1, complete sequence Length = 148544 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcactc 29 |||||||||||||||||||||| Sbjct: 23996 ccacacacacacgcgcgcactc 23975
>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds Length = 1008 Score = 44.1 bits (22), Expect = 0.35 Identities = 46/54 (85%) Strand = Plus / Plus Query: 319 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgtgggtggc 372 |||||| ||||| || |||||||||||||| || ||||| ||||| ||||||| Sbjct: 297 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 350
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 315 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctg 364 |||||||| |||||||||||| || ||| || | ||||||||||||||| Sbjct: 281 tgcggtggaacgtgcaggcggatcttgtgcactgccggtgggcgatgctg 330
>gb|AC102481.10| Mus musculus chromosome 1, clone RP24-427A3, complete sequence Length = 145973 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 accacacacacacgcgcgcac 27 ||||||||||||||||||||| Sbjct: 128644 accacacacacacgcgcgcac 128624
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence Length = 236084 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcac 33 ||||||||||||||||| ||||||| Sbjct: 165129 cacacacacacgcgcgcgctctcac 165105
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 ccggcggcgtcagcgtcgagc 136 ||||||||||||||||||||| Sbjct: 1184518 ccggcggcgtcagcgtcgagc 1184538
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||| ||||||||| ||||| Sbjct: 227781 cacacacacacgcacgcactctctctctc 227753
>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence Length = 205957 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 ccaccacacacacacgcgcgc 25 ||||||||||||||||||||| Sbjct: 158812 ccaccacacacacacgcgcgc 158792
>gb|AC122926.2| Mus musculus BAC clone RP23-10E15 from 6, complete sequence Length = 193055 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 accacacacacacgcgcgcac 27 ||||||||||||||||||||| Sbjct: 128472 accacacacacacgcgcgcac 128492
>gb|AC120768.5| Rattus norvegicus 7 BAC CH230-152B10 (Children's Hospital Oakland Research Institute) complete sequence Length = 221436 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||| ||||||||| ||||| Sbjct: 146993 cacacacacacgcacgcactctctctctc 147021
>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence Length = 213739 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 200163 cacacacacacgcgcgcactc 200183
>emb|X91393.1|SADNAABAB S.antibioticus abaB gene Length = 1850 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gcggaggacccggaggacctg 316 ||||||||||||||||||||| Sbjct: 638 gcggaggacccggaggacctg 658
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 acacacacacgcgcgcactct 30 ||||||||||||||||||||| Sbjct: 177647 acacacacacgcgcgcactct 177627
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 155299 cacacacacacgcgcgcactc 155319
>emb|CR388085.9| Zebrafish DNA sequence from clone CH211-232D10, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||||| ||| ||||| Sbjct: 126001 cacacacacacgcgcgcacactctctctc 125973
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 166764 cacacacacacgcgcgctctctctctctc 166792
>emb|BX321873.12| Zebrafish DNA sequence from clone DKEY-151G22 in linkage group 20 Contains four novel genes and three CpG islands, complete sequence Length = 155649 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||| |||||||||||||||| ||||| Sbjct: 57975 cacacagacacgcgcgcactctctctctc 58003
>gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188105 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 5 ccaccacacacacacgcgcgcactctcactctc 37 ||||||||||||||| | | ||||||||||||| Sbjct: 165458 ccaccacacacacacacactcactctcactctc 165426
>gb|AY119482.1| Drosophila melanogaster GH07166 full insert cDNA Length = 2928 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 151 cacacacacacgagcgcactctcgctctc 123
>ref|NM_169873.1| Drosophila melanogaster CG7535-RB, transcript variant B (GluClalpha), mRNA Length = 2293 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>ref|NM_142570.2| Drosophila melanogaster CG7535-RA, transcript variant A (GluClalpha), mRNA Length = 4014 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>gb|AY095093.1| Drosophila melanogaster SD01674 full insert cDNA Length = 3618 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cacacacacgcgcgcactctcactc 35 ||||||||||||||| ||||||||| Sbjct: 597 cacacacacgcgcgctctctcactc 573
>ref|NM_078835.2| Drosophila melanogaster kekkon-1 CG12283-RA (kek1), mRNA Length = 3595 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 cacacacacgcgcgcactctcactc 35 ||||||||||||||| ||||||||| Sbjct: 593 cacacacacgcgcgctctctcactc 569
>ref|NM_058026.3| Drosophila melanogaster ariadne 2 CG5709-RA (ari-2), mRNA Length = 3002 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 243 cacacacacacgagcgcactctcgctctc 215
>ref|NM_001038972.1| Drosophila melanogaster CG7535-RD, transcript variant D (GluClalpha), mRNA Length = 2293 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>ref|NM_001014641.1| Drosophila melanogaster CG7535-RC, transcript variant C (GluClalpha), mRNA Length = 2296 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 128 cacacacacacgcgcgcgctctcgctctc 100
>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence Length = 201397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 8256 cacacacacacgcgcgcactc 8236
>gb|AC099019.1| Drosophila melanogaster, chromosome 2R, region 58C-58D, BAC clone BACR02O12, complete sequence Length = 171594 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 33241 cacacacacacgagcgcactctcgctctc 33269
>emb|BX664606.17| Zebrafish DNA sequence from clone CH211-171L17 in linkage group 22, complete sequence Length = 181178 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||||| ||| ||||| Sbjct: 104232 cacacacacacgcgcgcacactctctctc 104204
>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR11M13, complete sequence Length = 190301 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cacacacacgcgcgcactctcactc 35 ||||||||||||||| ||||||||| Sbjct: 12287 cacacacacgcgcgctctctcactc 12311
>gb|AC093095.1| Drosophila melanogaster, chromosome 2L, region 33F-34A, BAC clone BACR17H02, complete sequence Length = 167544 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cacacacacgcgcgcactctcactc 35 ||||||||||||||| ||||||||| Sbjct: 120013 cacacacacgcgcgctctctcactc 120037
>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR07I18, complete sequence Length = 159413 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 154315 cacacacacacgcgcgcgctctcgctctc 154287
>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR48D03, complete sequence Length = 175917 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 40039 cacacacacacgcgcgcgctctcgctctc 40011
>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence Length = 214859 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 50548 cacacacacacgcgcgcactc 50568
>gb|AY183051.1| Trifolium repens clone ca672 microsatellite sequence Length = 498 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||| ||||||||||| ||||| Sbjct: 198 cacacacacactcgcgcactctctctctc 226
>gb|AC158686.2| Mus musculus 10 BAC RP24-74G10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 217129 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||||| | ||||||| Sbjct: 194866 cacacacacacgcgcgcacacgcactctc 194894
>gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8, complete sequence Length = 117406 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 3779 cacacacacacgcgcgcactc 3759
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 137525 cacacacacacgcgcgcactc 137545
>gb|AC004817.2|AC004817 Homo sapiens PAC clone RP6-91H8 from 14q24.3, complete sequence Length = 128398 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||| ||||| ||||||||| Sbjct: 99648 cacacacacacgcacgcacactcactctc 99620
>emb|BX957244.15| Zebrafish DNA sequence from clone CH211-13C6 in linkage group 19, complete sequence Length = 162321 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 7 accacacacacacgcgcgcactctcactc 35 |||||||||||||||||| ||||| |||| Sbjct: 78953 accacacacacacgcgcgtactctgactc 78981
>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4, complete sequence Length = 210697 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||| ||| ||||||||||||| Sbjct: 24208 cacacacacacacgcacactctcactctc 24236
>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete sequence Length = 242618 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 135653 cacacacacacgcgcgcgctctcgctctc 135625
>gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46 of 83 of the complete sequence Length = 222787 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 cacacacacgcgcgcactctcactc 35 ||||||||||||||| ||||||||| Sbjct: 178450 cacacacacgcgcgctctctcactc 178474
>gb|AE003456.3| Drosophila melanogaster chromosome 2R, section 64 of 73 of the complete sequence Length = 288451 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 214985 cacacacacacgagcgcactctcgctctc 214957
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactc 29 ||||||||||||||||||||| Sbjct: 184166 cacacacacacgcgcgcactc 184186
>gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, complete sequence Length = 228551 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 accacacacacacgcgcgcac 27 ||||||||||||||||||||| Sbjct: 161824 accacacacacacgcgcgcac 161844
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ccacccgccgcgacgtcgccg 200 ||||||||||||||||||||| Sbjct: 688896 ccacccgccgcgacgtcgccg 688916
>gb|U58776.1|DMU58776 Drosophila melanogaster glutamate-gated chloride channel (DrosGluCl) mRNA, complete cds Length = 3958 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| ||||| ||||| Sbjct: 122 cacacacacacgcgcgcgctctcgctctc 94
>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence Length = 154085 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ccaccacacacacacgcgcgc 25 ||||||||||||||||||||| Sbjct: 130733 ccaccacacacacacgcgcgc 130753
>gb|AC002473.1|AC002473 Drosophila melanogaster (P1 DS02833 (D61)) DNA sequence, complete sequence Length = 71504 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 48460 cacacacacacgagcgcactctcgctctc 48432
>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence Length = 217329 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||| ||||||||| ||||| Sbjct: 153088 cacacacacacgcacgcactctctctctc 153116
>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence Length = 186518 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccacacacacacgcgcgcact 28 ||||||||||||||||||||| Sbjct: 53888 ccacacacacacgcgcgcact 53908
>emb|AJ010169.1|DME010169 Drosophila melanogaster mRNA for Ariadne-2 protein Length = 2998 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactctc 37 |||||||||||| |||||||||| ||||| Sbjct: 243 cacacacacacgagcgcactctcgctctc 215
>gb|M76700.1|DROZSTA Drosophila virilis zeste gene, complete cds Length = 2708 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactctc 37 ||||||||||||||||| | ||||||||| Sbjct: 249 cacacacacacgcgcgcgcgctcactctc 277
>gb|AC137855.14| Mus musculus chromosome 16, clone RP24-444E8, complete sequence Length = 196783 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 193071 ccacacacacacgcgcgcac 193090
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactct 36 |||||||||||| |||| |||||||||| Sbjct: 182604 cacacacacacgagcgcgctctcactct 182631
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 cgccaagtccacccgccgcgacgtcgcc 199 ||||||| || ||||||||||||||||| Sbjct: 776 cgccaaggccgcccgccgcgacgtcgcc 749
>ref|NM_002206.1| Homo sapiens integrin, alpha 7 (ITGA7), mRNA Length = 4079 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 281 aggcggagctgatccacgggcggtgggcgatg 312
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 8374 ggaggacccggaggacctgc 8355
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactct 36 ||||||||||||||||| ||| |||||| Sbjct: 73961 cacacacacacgcgcgcgctcccactct 73934
>gb|AC124326.11| Mus musculus chromosome 16, clone RP24-463I7, complete sequence Length = 168107 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 85403 ccacacacacacgcgcgcac 85384
>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence Length = 161579 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 34147 caccacacacacacgcgcgc 34128
>gb|BC075813.1| Homo sapiens B cell RAG associated protein, mRNA (cDNA clone MGC:87961 IMAGE:5213653), complete cds Length = 4523 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 3796 cacacacacacgcgcgcact 3777
>ref|NM_001029980.1| Gallus gallus proline rich 5 (renal) (PRR5), mRNA Length = 2069 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgcgctcccgtggccgctc 110 |||||||||||||||||||| Sbjct: 42 ccgcgctcccgtggccgctc 23
>ref|NM_001844.3| Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 1, mRNA Length = 5060 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggacccggaggacctgcgg 319 |||||||||||||||||||| Sbjct: 1231 aggacccggaggacctgcgg 1212
>ref|NM_033150.1| Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 2, mRNA Length = 4853 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggacccggaggacctgcgg 319 |||||||||||||||||||| Sbjct: 1024 aggacccggaggacctgcgg 1005
>gb|AC111275.4| Rattus norvegicus 4 BAC CH230-49L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227595 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 13670 ccacacacacacgcgcgcac 13689
>gb|BC069957.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone IMAGE:4502830), partial cds Length = 1982 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 836 ggaggacccggaggacctgc 817
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 137552 ggaggacccggaggacctgc 137533
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 89980 ccacacacacacgcgcgcac 89999
>ref|XM_548544.2| PREDICTED: Canis familiaris similar to solute carrier family 15, member 4 (LOC491423), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 ggcggagctggtgaacgggcggtg 354 ||||||||||| |||||||||||| Sbjct: 408 ggcggagctggcgaacgggcggtg 385
>ref|XM_980756.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>ref|XM_980302.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2459 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>ref|XM_898536.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 2 (Tmem16h), mRNA Length = 7202 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 3838 ggaggacccggaggacctgc 3857
>ref|XM_898544.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 3 (Tmem16h), mRNA Length = 7873 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 4509 ggaggacccggaggacctgc 4528
>ref|XM_889480.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 1 (Tmem16h), mRNA Length = 8182 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 4818 ggaggacccggaggacctgc 4837
>ref|XM_980411.1| PREDICTED: Mus musculus transmembrane protein 16H (Tmem16h), mRNA Length = 6658 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 3294 ggaggacccggaggacctgc 3313
>ref|XM_912953.2| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>ref|XM_748282.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g12780) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 154 ctccggccgcgtcgggctcgccaagtcc 181 ||||||||||| ||||||||||| |||| Sbjct: 273 ctccggccgcggcgggctcgccatgtcc 300
>gb|AC113068.9| Mus musculus chromosome 1, clone RP23-269F19, complete sequence Length = 188836 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctca 32 ||||||||||||| |||||||||| Sbjct: 61366 cacacacacacgcacgcactctca 61343
>gb|BC034701.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone MGC:27873 IMAGE:3494430), complete cds Length = 1918 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 758 ggaggacccggaggacctgc 739
>gb|AY358882.1| Homo sapiens clone DNA55737 ITGA7 (UNQ406) mRNA, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2349 atgctgatcccggaggtgct 2330
>emb|CR662594.2|CNS0FA88 Tetraodon nigroviridis full-length cDNA Length = 2092 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 1502 ccacacacacacgcgcgcac 1521
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 107961 ggaggacccggaggacctgc 107942
>gb|AY060467.1| Drosophila melanogaster SD05230 full insert cDNA Length = 1504 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 60 caccacacacacacgcgcgc 41
>gb|BT011458.1| Drosophila melanogaster RE33929 full insert cDNA Length = 1082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 26 caccacacacacacgcgcgc 7
>emb|AL683842.11| Human DNA sequence from clone RP11-47G11 on chromosome 10 Contains the gene for B cell RAG associated protein (GALNAC4S-6ST) (BRAG, KIAA0598), a novel pseudogene and three CpG islands, complete sequence Length = 149244 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 101609 cacacacacacgcgcgcact 101590
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 cgactccggccgcgtcgggctcgc 174 ||||||||||||||||| |||||| Sbjct: 746809 cgactccggccgcgtcgcgctcgc 746786
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cggccgcgtcgggctcgcca 176 |||||||||||||||||||| Sbjct: 1316841 cggccgcgtcgggctcgcca 1316822
>emb|AL133293.28| Human DNA sequence from clone RP5-823N20 on chromosome 20 Contains the 5' end of the SRC gene for v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog, the RPL7AL4 gene for ribosomal protein L7A-like 4 (pseudogene) and a CpG island, complete sequence Length = 68662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 35569 caccacacacacacgcgcgc 35550
>emb|BX649442.7| Zebrafish DNA sequence from clone DKEY-265J8 in linkage group 9, complete sequence Length = 176456 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acacacacacgcgcgcactctcac 33 |||||||||||||||||| ||||| Sbjct: 171502 acacacacacgcgcgcacactcac 171525
>ref|NM_204790.1| Gallus gallus alpha 1 (V) collagen (LOC395568), mRNA Length = 5575 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cggaggacccggaggacctg 316 |||||||||||||||||||| Sbjct: 3057 cggaggacccggaggacctg 3038
>gb|BC050280.1| Homo sapiens integrin, alpha 7, mRNA (cDNA clone MGC:33821 IMAGE:5284443), complete cds Length = 4130 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2534 atgctgatcccggaggtgct 2515
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 20137 aggcggagctgatccacgggcggtgggcgatg 20106
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcgatgctgtgggtggcgg 374 |||||||||||||||||||| Sbjct: 68884 ggcgatgctgtgggtggcgg 68865 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcgatgctgtgggtggcgg 374 |||||||||||||||||||| Sbjct: 66584 ggcgatgctgtgggtggcgg 66565
>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 84362 caccacacacacacgcgcgc 84343
>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20 Contains two novel genes and two CpG islands, complete sequence Length = 200339 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 10216 ccacacacacacgcgcgcac 10197
>emb|CR749804.1| Homo sapiens mRNA; cDNA DKFZp781H1369 (from clone DKFZp781H1369) Length = 4893 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 4221 cacacacacacgcgcgcact 4202
>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14, complete sequence Length = 204730 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 accacacacacacgcgcgca 26 |||||||||||||||||||| Sbjct: 78984 accacacacacacgcgcgca 79003
>gb|AC009779.18| Homo sapiens 12 BAC RP11-644F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 42716 atgctgatcccggaggtgct 42697
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcactctcactc 35 |||||||||||||| ||||| ||||||| Sbjct: 114378 ccacacacacacgcacgcacactcactc 114351
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 acacacgcgcgcactctcac 33 |||||||||||||||||||| Sbjct: 48239 acacacgcgcgcactctcac 48220
>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179613 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcactctcactc 35 |||||||||||||| ||||| ||||||| Sbjct: 67908 ccacacacacacgcacgcacactcactc 67881
>dbj|AK022548.1| Homo sapiens cDNA FLJ12486 fis, clone NT2RM2000566, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 3504 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 1922 atgctgatcccggaggtgct 1903
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 333 aggcggagctgatccacgggcggtgggcgatg 364
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>ref|NM_169144.1| Drosophila melanogaster CG10272-RC, transcript variant C (CG10272), mRNA Length = 6626 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 61 caccacacacacacgcgcgc 42
>ref|NM_169143.1| Drosophila melanogaster CG10272-RD, transcript variant D (CG10272), mRNA Length = 7303 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 61 caccacacacacacgcgcgc 42
>ref|NM_169142.1| Drosophila melanogaster CG10272-RB, transcript variant B (CG10272), mRNA Length = 7689 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 61 caccacacacacacgcgcgc 42
>ref|NM_141398.1| Drosophila melanogaster CG10272-RA, transcript variant A (CG10272), mRNA Length = 7303 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 61 caccacacacacacgcgcgc 42
>dbj|AK149980.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530111L19 product:hypothetical protein, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 778 ggaggacccggaggacctgc 759
>dbj|AK160132.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500034J01 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 1916 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 796 ggaggacccggaggacctgc 777
>dbj|AK149117.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120484N02 product:weakly similar to Proline-rich protein MP-2 precursor [Mus musculus], full insert sequence Length = 1836 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 728 ggaggacccggaggacctgc 709
>emb|BX248234.13| Zebrafish DNA sequence from clone DKEY-13E15 in linkage group 16, complete sequence Length = 220538 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 40786 cacacacacacgcgcgcact 40767
>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete sequence Length = 216068 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 184134 cacacacacacgcgcgcact 184153
>dbj|AK032966.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720482G04 product:hypothetical protein, full insert sequence Length = 1894 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 756 ggaggacccggaggacctgc 737
>dbj|AK006318.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700025A19 product:hypothetical protein, full insert sequence Length = 915 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 782 ggaggacccggaggacctgc 763
>ref|NM_015892.2| Homo sapiens B cell RAG associated protein (GALNAC4S-6ST), mRNA Length = 4713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 4000 cacacacacacgcgcgcact 3981
>emb|CR353501.1| Gallus gallus finished cDNA, clone ChEST132n8 Length = 2069 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgcgctcccgtggccgctc 110 |||||||||||||||||||| Sbjct: 42 ccgcgctcccgtggccgctc 23
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 22811362 aggcggagctgatccacgggcggtgggcgatg 22811331 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcgatgctgtgggtggcgg 374 |||||||||||||||||||| Sbjct: 19415320 ggcgatgctgtgggtggcgg 19415301
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 8420595 cgacgtcgccgtccaggcca 8420614
>gb|BC093523.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone MGC:103301 IMAGE:3711509), complete cds Length = 1897 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 741 ggaggacccggaggacctgc 722
>dbj|AB210036.1| Homo sapiens mRNA for ITGA7 variant protein, partial cds, clone: hk04261 Length = 4090 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2508 atgctgatcccggaggtgct 2489
>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7, complete sequence Length = 237129 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 202675 cacacacacacgcgcgcact 202656
>gb|AC131954.1| Homo sapiens BAC clone RP11-761I13 from 2, complete sequence Length = 100732 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 accaccacacacacacgcgcgcac 27 |||||||||||||||| ||||||| Sbjct: 31779 accaccacacacacacacgcgcac 31756
>dbj|AB025341.2| Homo sapiens BRAG gene for BRAG, complete cds Length = 14307 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 13485 cacacacacacgcgcgcact 13466
>gb|AF072132.1|AF072132 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 3485 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2318 atgctgatcccggaggtgct 2299
>gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete sequence Length = 133980 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactct 36 |||||||||||| |||| |||||||||| Sbjct: 52804 cacacacacacgagcgcgctctcactct 52831
>emb|BX005307.12| Zebrafish DNA sequence from clone DKEY-235F19 in linkage group 6, complete sequence Length = 200462 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 34607 cacacacacacgcgcgcact 34626
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence Length = 226264 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 cacacacacgcgcgcactctcactctcc 38 ||||||||||||||||| | |||||||| Sbjct: 92587 cacacacacgcgcgcacacgcactctcc 92614
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 50393 cgacgtcgccgtccaggcca 50374
>gb|BC079637.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone IMAGE:5719502) Length = 4517 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ggaggacccggaggacctgc 317 |||||||||||||||||||| Sbjct: 3365 ggaggacccggaggacctgc 3346
>dbj|AB011170.1| Homo sapiens mRNA for KIAA0598 protein, partial cds Length = 4712 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 4068 cacacacacacgcgcgcact 4049
>dbj|AK057949.1| Homo sapiens cDNA FLJ25220 fis, clone STM00558, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 1965 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 383 atgctgatcccggaggtgct 364
>dbj|AK109697.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F02, full insert sequence Length = 2370 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 1578 cgacgtcgccgtccaggcca 1597
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 517 aggcggagctgatccacgggcggtgggcgatg 486
>gb|AF137273.1|AF137273 Gallus gallus alpha 1 (V) collagen mRNA, complete cds Length = 5575 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 cggaggacccggaggacctg 316 |||||||||||||||||||| Sbjct: 3057 cggaggacccggaggacctg 3038
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 343 aggcggagctgatccacgggcggtgggcgatg 374
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 cgccaagtccacccgccgcgacgtcgcc 199 ||||||| || ||||||||||||||||| Sbjct: 776 cgccaaggccgcccgccgcgacgtcgcc 749
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 cgccgcgacgtcgccgtccaggcc 208 ||||||| |||||||||||||||| Sbjct: 2461449 cgccgcgtcgtcgccgtccaggcc 2461472
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 344 aggcggagctgatccacgggcggtgggcgatg 375
>emb|BX681416.9| Zebrafish DNA sequence from clone CH211-45M15 in linkage group 20, complete sequence Length = 188412 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 59441 cacacacacacgcgcgcact 59460
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cgccaagtccacccgccgcgacgtcgcc 199 ||||||| || ||||||||||||||||| Sbjct: 142431 cgccaaggccgcccgccgcgacgtcgcc 142458
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 aggcggagctggtgaacgggcggtgggcgatg 361 ||||||||||| | ||||||||||||||||| Sbjct: 335 aggcggagctgatccacgggcggtgggcgatg 366
>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete sequence Length = 145958 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccacacacacacgcgcgc 25 |||||||||||||||||||| Sbjct: 72616 caccacacacacacgcgcgc 72597
>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete sequence Length = 365612 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcactctcactc 35 |||||||||||||| ||||| ||||||| Sbjct: 247270 ccacacacacacgcacgcacactcactc 247243
>emb|AJ228853.1|HSAJ8853 Homo sapiens ITGA7 gene, exon 18 Length = 247 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 100 atgctgatcccggaggtgct 81
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 acacacgcgcgcactctcac 33 |||||||||||||||||||| Sbjct: 110549 acacacgcgcgcactctcac 110530
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 accaccacacacacacgcgcgcac 27 |||||||||||||| ||||||||| Sbjct: 29681 accaccacacacacgcgcgcgcac 29658
>gb|AC119962.25| Mus musculus chromosome 14, clone RP24-468L11, complete sequence Length = 141600 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccacacacacacgcgcgcac 27 |||||||||||||||||||| Sbjct: 47501 ccacacacacacgcgcgcac 47482
>gb|AF026477.1|AF026477 Homo sapiens B cell RAG associated protein (BRAG) mRNA, complete cds Length = 4382 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 3694 cacacacacacgcgcgcact 3675
>gb|AF032108.1|AF032108 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 4079 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgctgatcccggaggtgct 396 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactct 36 |||||||||||| |||| |||||||||| Sbjct: 215172 cacacacacacgagcgcgctctcactct 215199
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 8420478 cgacgtcgccgtccaggcca 8420497
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 cgacgtcgccgtccaggcca 209 |||||||||||||||||||| Sbjct: 27258 cgacgtcgccgtccaggcca 27277
>gb|BC027908.1| Homo sapiens B cell RAG associated protein, mRNA (cDNA clone MGC:34346 IMAGE:5204516), complete cds Length = 4754 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcact 28 |||||||||||||||||||| Sbjct: 4043 cacacacacacgcgcgcact 4024
>emb|CR749776.6| Zebrafish DNA sequence from clone CH211-206L17 in linkage group 9, complete sequence Length = 154131 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 acacacacacgcgcgcactctcac 33 |||||||||||||||||| ||||| Sbjct: 56310 acacacacacgcgcgcacactcac 56333
>dbj|AB217442.1| Equus caballus DNA, microsatellite TKY3499 Length = 386 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 cacacacacacgcgcgcactctcactct 36 ||||||||||||| | |||||||||||| Sbjct: 191 cacacacacacgcacacactctcactct 218
>emb|AL021067.1|DMC123F11 Drosophila melanogaster cosmid clone 123F11 Length = 23109 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 acacacgcgcgcactctcac 33 |||||||||||||||||||| Sbjct: 567 acacacgcgcgcactctcac 548
>emb|X16711.1|HSCOL2A1R H.sapiens COL2A1 mRNA for alpha1 (II) collagen Length = 3480 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggacccggaggacctgcgg 319 |||||||||||||||||||| Sbjct: 867 aggacccggaggacctgcgg 848
>dbj|AB028208.1| Branchiostoma floridae AmphiHox4 gene, complete cds Length = 3608 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 cacacacacacgcgcgcactctcactct 36 |||||||||||| |||| |||||||||| Sbjct: 2199 cacacacacacgagcgcgctctcactct 2172
>dbj|AB078612.2| Leptothrix cholodnii orf1, lthA, lthB, lthC, orf5, orf6 genes, complete cds Length = 7608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gatgtcgtcggtcagtgccc 92 |||||||||||||||||||| Sbjct: 4132 gatgtcgtcggtcagtgccc 4113 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,230,452 Number of Sequences: 3902068 Number of extensions: 12230452 Number of successful extensions: 114177 Number of sequences better than 10.0: 243 Number of HSP's better than 10.0 without gapping: 245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113079 Number of HSP's gapped (non-prelim): 1081 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
