ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477672.1| Oryza sativa (japonica cultivar-group), mRNA 196 4e-47
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 196 4e-47
3dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 196 4e-47
4dbj|AK060507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
5dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 48 0.023
6gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 46 0.089
7dbj|AK110434.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.089
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
9emb|AL663011.2|OSJN00215 Oryza sativa genomic DNA, chromosome 4,... 44 0.35
10ref|XM_507055.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.4
11ref|XM_468435.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
13emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.4
14gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.4
15emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.4
16gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.4
17gb|AC091727.2|AC091727 Takifugu rubripes clone 250A8, complete s... 42 1.4
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AK110560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
26dbj|AK106922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
27dbj|AK100771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28dbj|AK060511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
29gb|AF069776.1|AF069776 Xanthomonas phage phi-Xv adsorption prote... 42 1.4
30gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
31gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.4
32gb|U65440.1|RPU65440 Rhodopseudomonas palustris 4-hydroxybenzoyl... 42 1.4
33dbj|AP007291.1| Lotus japonicus genomic DNA, clone:LjT06A03, TM0... 42 1.4
34ref|XM_520016.1| PREDICTED: Pan troglodytes similar to Solute ca... 40 5.5
35gb|BT017486.1| Zea mays clone EL01N0412G05.c mRNA sequence 40 5.5
36gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 5.5
37gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E2... 40 5.5
38gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7,... 40 5.5
39ref|XM_658370.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.5
40ref|XM_819926.1| Trypanosoma brucei TREU927 clone RPCI93-6E7 hyp... 40 5.5
41emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 5.5
42emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosy... 40 5.5
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.5
44gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.5 
>ref|XM_477672.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1529

 Score =  196 bits (99), Expect = 4e-47
 Identities = 165/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 212 gccacgggcgctgccgctcaccttcttcgacctcgcattctgggacgtcccgcccgtgca 271
           ||||||| ||||||||||||| |||||||||||||  |||| |||| |||||||||||||
Sbjct: 101 gccacggtcgctgccgctcacgttcttcgacctcgtcttcttggacttcccgcccgtgca 160

                                                                       
Query: 272 gcgcctcttcttctacgacaacgccgacctcctcggcgcccccgagttcctcctccacga 331
           |||||||||||||||||||||||||||||||| || |||||  || |||||||||| |||
Sbjct: 161 gcgcctcttcttctacgacaacgccgacctccgcgacgcccatgacttcctcctccgcga 220

                                                                       
Query: 332 gctgcctctgttcaagaagtccctggccgccgcgctgcaccacttctaccccttggccgg 391
           ||| || || |||| | ||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 221 gcttcccctcttcagggagtccctggccgctgccctgcaccatttctaccccttggtcgg 280

                  
Query: 392 gacgctg 398
           || ||||
Sbjct: 281 gaagctg 287
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  196 bits (99), Expect = 4e-47
 Identities = 165/187 (88%)
 Strand = Plus / Plus

                                                                            
Query: 212      gccacgggcgctgccgctcaccttcttcgacctcgcattctgggacgtcccgcccgtgca 271
                ||||||| ||||||||||||| |||||||||||||  |||| |||| |||||||||||||
Sbjct: 13000285 gccacggtcgctgccgctcacgttcttcgacctcgtcttcttggacttcccgcccgtgca 13000344

                                                                            
Query: 272      gcgcctcttcttctacgacaacgccgacctcctcggcgcccccgagttcctcctccacga 331
                |||||||||||||||||||||||||||||||| || |||||  || |||||||||| |||
Sbjct: 13000345 gcgcctcttcttctacgacaacgccgacctccgcgacgcccatgacttcctcctccgcga 13000404

                                                                            
Query: 332      gctgcctctgttcaagaagtccctggccgccgcgctgcaccacttctaccccttggccgg 391
                ||| || || |||| | ||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 13000405 gcttcccctcttcagggagtccctggccgctgccctgcaccatttctaccccttggtcgg 13000464

                       
Query: 392      gacgctg 398
                || ||||
Sbjct: 13000465 gaagctg 13000471
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score =  196 bits (99), Expect = 4e-47
 Identities = 165/187 (88%)
 Strand = Plus / Plus

                                                                         
Query: 212   gccacgggcgctgccgctcaccttcttcgacctcgcattctgggacgtcccgcccgtgca 271
             ||||||| ||||||||||||| |||||||||||||  |||| |||| |||||||||||||
Sbjct: 74582 gccacggtcgctgccgctcacgttcttcgacctcgtcttcttggacttcccgcccgtgca 74641

                                                                         
Query: 272   gcgcctcttcttctacgacaacgccgacctcctcggcgcccccgagttcctcctccacga 331
             |||||||||||||||||||||||||||||||| || |||||  || |||||||||| |||
Sbjct: 74642 gcgcctcttcttctacgacaacgccgacctccgcgacgcccatgacttcctcctccgcga 74701

                                                                         
Query: 332   gctgcctctgttcaagaagtccctggccgccgcgctgcaccacttctaccccttggccgg 391
             ||| || || |||| | ||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 74702 gcttcccctcttcagggagtccctggccgctgccctgcaccatttctaccccttggtcgg 74761

                    
Query: 392   gacgctg 398
             || ||||
Sbjct: 74762 gaagctg 74768
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>dbj|AK060507.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A03, full
           insert sequence
          Length = 1529

 Score =  196 bits (99), Expect = 4e-47
 Identities = 165/187 (88%)
 Strand = Plus / Plus

                                                                       
Query: 212 gccacgggcgctgccgctcaccttcttcgacctcgcattctgggacgtcccgcccgtgca 271
           ||||||| ||||||||||||| |||||||||||||  |||| |||| |||||||||||||
Sbjct: 101 gccacggtcgctgccgctcacgttcttcgacctcgtcttcttggacttcccgcccgtgca 160

                                                                       
Query: 272 gcgcctcttcttctacgacaacgccgacctcctcggcgcccccgagttcctcctccacga 331
           |||||||||||||||||||||||||||||||| || |||||  || |||||||||| |||
Sbjct: 161 gcgcctcttcttctacgacaacgccgacctccgcgacgcccatgacttcctcctccgcga 220

                                                                       
Query: 332 gctgcctctgttcaagaagtccctggccgccgcgctgcaccacttctaccccttggccgg 391
           ||| || || |||| | ||||||||||||| || |||||||| ||||||||||||| |||
Sbjct: 221 gcttcccctcttcagggagtccctggccgctgccctgcaccatttctaccccttggtcgg 280

                  
Query: 392 gacgctg 398
           || ||||
Sbjct: 281 gaagctg 287
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 285    tacgacaacgccgacctcctcggcgccc 312
              |||||||||||||||||||||| |||||
Sbjct: 643900 tacgacaacgccgacctcctcgccgccc 643927
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 184    cgccgtcgccgtcaccaccggcc 206
              |||||||||||||||||||||||
Sbjct: 868608 cgccgtcgccgtcaccaccggcc 868630



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 357     gccgccgcgctgcaccacttc 377
               |||||||||||||||||||||
Sbjct: 1700498 gccgccgcgctgcaccacttc 1700518
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>dbj|AK110434.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-C03, full
           insert sequence
          Length = 2627

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 183 tcgccgtcgccgtcaccaccggc 205
           |||||||||||||||||||||||
Sbjct: 940 tcgccgtcgccgtcaccaccggc 962
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 182     ctcgccgtcgccgtcaccaccg 203
               ||||||||||||||||||||||
Sbjct: 1930010 ctcgccgtcgccgtcaccaccg 1929989
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>emb|AL663011.2|OSJN00215 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0080H08,
             complete sequence
          Length = 138127

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 182   ctcgccgtcgccgtcaccaccg 203
             ||||||||||||||||||||||
Sbjct: 73247 ctcgccgtcgccgtcaccaccg 73226
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>ref|XM_507055.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.32
           mRNA
          Length = 1810

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 358 ccgccgcgctgcaccacttctaccc 382
           ||||||||||||||| |||||||||
Sbjct: 373 ccgccgcgctgcaccgcttctaccc 397
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>ref|XM_468435.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 358 ccgccgcgctgcaccacttctaccc 382
           ||||||||||||||| |||||||||
Sbjct: 215 ccgccgcgctgcaccgcttctaccc 239
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 286     acgacaacgccgacctcctcg 306
               |||||||||||||||||||||
Sbjct: 5017970 acgacaacgccgacctcctcg 5017950
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 183     tcgccgtcgccgtcaccaccg 203
               |||||||||||||||||||||
Sbjct: 2792430 tcgccgtcgccgtcaccaccg 2792450
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>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   acgacaacgccgacctcctcg 306
             |||||||||||||||||||||
Sbjct: 82424 acgacaacgccgacctcctcg 82404
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    cgccgtcgccgtcaccaccgg 204
              |||||||||||||||||||||
Sbjct: 175176 cgccgtcgccgtcaccaccgg 175196



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   gccgccgcgctgcaccacttc 377
             |||||||||||||||||||||
Sbjct: 42748 gccgccgcgctgcaccacttc 42728
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 286    acgacaacgccgacctcctcg 306
              |||||||||||||||||||||
Sbjct: 151737 acgacaacgccgacctcctcg 151757
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>gb|AC091727.2|AC091727 Takifugu rubripes clone 250A8, complete sequence
          Length = 58366

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     gcgttgctgctgcccggttgt 22
             |||||||||||||||||||||
Sbjct: 26695 gcgttgctgctgcccggttgt 26675
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 283     tctacgacaacgccgacctcc 303
               |||||||||||||||||||||
Sbjct: 5811259 tctacgacaacgccgacctcc 5811279
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 286     acgacaacgccgacctcctcg 306
               |||||||||||||||||||||
Sbjct: 5017185 acgacaacgccgacctcctcg 5017165
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 358      ccgccgcgctgcaccacttctaccc 382
                ||||||||||||||| |||||||||
Sbjct: 35241991 ccgccgcgctgcaccgcttctaccc 35241967
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>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 283    tctacgacaacgccgacctcc 303
              |||||||||||||||||||||
Sbjct: 126788 tctacgacaacgccgacctcc 126808
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   tctacgacaacgccgacctcc 303
             |||||||||||||||||||||
Sbjct: 12034 tctacgacaacgccgacctcc 12054
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 358   ccgccgcgctgcaccacttctaccc 382
             ||||||||||||||| |||||||||
Sbjct: 54041 ccgccgcgctgcaccgcttctaccc 54017
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 358    ccgccgcgctgcaccacttctaccc 382
              ||||||||||||||| |||||||||
Sbjct: 137347 ccgccgcgctgcaccgcttctaccc 137323
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>dbj|AK110560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C11, full
           insert sequence
          Length = 922

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 286 acgacaacgccgacctcctcg 306
           |||||||||||||||||||||
Sbjct: 442 acgacaacgccgacctcctcg 462
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>dbj|AK106922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B06, full
           insert sequence
          Length = 662

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 283 tctacgacaacgccgacctcc 303
           |||||||||||||||||||||
Sbjct: 255 tctacgacaacgccgacctcc 275
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>dbj|AK100771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120A02, full
           insert sequence
          Length = 1810

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 358 ccgccgcgctgcaccacttctaccc 382
           ||||||||||||||| |||||||||
Sbjct: 373 ccgccgcgctgcaccgcttctaccc 397
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>dbj|AK060511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D06, full
           insert sequence
          Length = 1656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 358 ccgccgcgctgcaccacttctaccc 382
           ||||||||||||||| |||||||||
Sbjct: 215 ccgccgcgctgcaccgcttctaccc 239
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>gb|AF069776.1|AF069776 Xanthomonas phage phi-Xv adsorption protein (gIII) gene, complete
           cds
          Length = 1256

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 183 tcgccgtcgccgtcaccaccg 203
           |||||||||||||||||||||
Sbjct: 753 tcgccgtcgccgtcaccaccg 733
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 349    agtccctggccgccgcgctgc 369
              |||||||||||||||||||||
Sbjct: 390049 agtccctggccgccgcgctgc 390029
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 350    gtccctggccgccgcgctgca 370
              |||||||||||||||||||||
Sbjct: 937991 gtccctggccgccgcgctgca 937971
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>gb|U65440.1|RPU65440 Rhodopseudomonas palustris 4-hydroxybenzoyl-CoA reductase HbaB
            subunit (hbaB), HbaC subunit (hbaC) and HbaD subunit
            (hbaD) genes, complete cds
          Length = 4050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 357  gccgccgcgctgcaccacttc 377
            |||||||||||||||||||||
Sbjct: 1631 gccgccgcgctgcaccacttc 1611
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>dbj|AP007291.1| Lotus japonicus genomic DNA, clone:LjT06A03, TM0345, complete sequence
          Length = 89191

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tcgccgtcgccgtcaccaccg 203
             |||||||||||||||||||||
Sbjct: 28703 tcgccgtcgccgtcaccaccg 28723
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>ref|XM_520016.1| PREDICTED: Pan troglodytes similar to Solute carrier family 39
           (zinc transporter), member 4 (LOC464462), mRNA
          Length = 1957

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 tcgccgtcgccgtcaccacc 202
           ||||||||||||||||||||
Sbjct: 107 tcgccgtcgccgtcaccacc 88
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>gb|BT017486.1| Zea mays clone EL01N0412G05.c mRNA sequence
          Length = 1255

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 cgccgacctcctcggcgccc 312
           ||||||||||||||||||||
Sbjct: 236 cgccgacctcctcggcgccc 255
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     tcgccgtcgccgtcaccacc 202
               ||||||||||||||||||||
Sbjct: 1213751 tcgccgtcgccgtcaccacc 1213732
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>gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E22, complete sequence
          Length = 141628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tcgccgtcgccgtcaccacc 202
             ||||||||||||||||||||
Sbjct: 28866 tcgccgtcgccgtcaccacc 28847
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>gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7, complete sequence
          Length = 170328

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    tcgccgtcgccgtcaccacc 202
              ||||||||||||||||||||
Sbjct: 144854 tcgccgtcgccgtcaccacc 144835
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>ref|XM_658370.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5858.2), mRNA
          Length = 2361

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  cgccgtcgccgtcaccaccg 203
            ||||||||||||||||||||
Sbjct: 2101 cgccgtcgccgtcaccaccg 2120
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>ref|XM_819926.1| Trypanosoma brucei TREU927 clone RPCI93-6E7 hypothetical protein
            (Tb927.5.3900) partial mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  tcgccgtcgccgtcaccacc 202
            ||||||||||||||||||||
Sbjct: 1292 tcgccgtcgccgtcaccacc 1273
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ccgtcgccgtcaccaccggc 205
             ||||||||||||||||||||
Sbjct: 92728 ccgtcgccgtcaccaccggc 92709
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>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster
          Length = 84985

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   ctcgccgtcgccgtcaccaccggc 205
             ||||||||||||| ||||||||||
Sbjct: 40178 ctcgccgtcgccgacaccaccggc 40155
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     gtccctggccgccgcgctgc 369
               ||||||||||||||||||||
Sbjct: 2965821 gtccctggccgccgcgctgc 2965840
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 185     gccgtcgccgtcaccaccggccgagatg 212
               |||||||||||| |||||||||| ||||
Sbjct: 1134909 gccgtcgccgtccccaccggccgcgatg 1134882


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,795,202
Number of Sequences: 3902068
Number of extensions: 2795202
Number of successful extensions: 61394
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60369
Number of HSP's gapped (non-prelim): 1025
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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