ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44c08 |
|---|---|
| Clone Library Name | barley_pub |
>GRP2_NICSY (P27484) Glycine-rich protein 2| Length = 214 Score = 106 bits (264), Expect = 2e-23 Identities = 47/70 (67%), Positives = 59/70 (84%) Frame = +3 Query: 63 GERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G+R KGTVKWF+ KGFGFI+P+DG +DLFVHQS I+++G+RSL E + VEF+V +GGDG Sbjct: 6 GQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDG 65 Query: 243 RTKASDVTAP 272 RTKA DVT P Sbjct: 66 RTKAVDVTGP 75
>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)| Length = 201 Score = 92.8 bits (229), Expect = 2e-19 Identities = 42/70 (60%), Positives = 53/70 (75%) Frame = +3 Query: 63 GERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G+R KGTVKWF+ KGFGFI+P DG DDLFVHQS+I+++G+RSL + VEFDV G Sbjct: 12 GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSG 71 Query: 243 RTKASDVTAP 272 R KA +V+ P Sbjct: 72 RPKAIEVSGP 81
>CSPE_BUCBP (Q89A90) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 80.9 bits (198), Expect = 8e-16 Identities = 34/66 (51%), Positives = 52/66 (78%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L+E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLSEGQSVEFEITEGAKGPS 61 Query: 249 KASDVT 266 A+ ++ Sbjct: 62 AANVIS 67
>CSPE_BUCAP (P63238) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 2e-15 Identities = 34/66 (51%), Positives = 51/66 (77%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVEFEITEGAKGPS 61 Query: 249 KASDVT 266 A+ ++ Sbjct: 62 AANVIS 67
>CSPE_BUCAI (P63237) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 2e-15 Identities = 34/66 (51%), Positives = 51/66 (77%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVEFEITEGAKGPS 61 Query: 249 KASDVT 266 A+ ++ Sbjct: 62 AANVIS 67
>CSPE_SHIFL (P0A975) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.0 bits (193), Expect = 3e-15 Identities = 34/63 (53%), Positives = 48/63 (76%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 61 Query: 249 KAS 257 A+ Sbjct: 62 AAN 64
>CSPE_ECOLI (P0A972) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.0 bits (193), Expect = 3e-15 Identities = 34/63 (53%), Positives = 48/63 (76%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 61 Query: 249 KAS 257 A+ Sbjct: 62 AAN 64
>CSPE_ECOL6 (P0A973) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.0 bits (193), Expect = 3e-15 Identities = 34/63 (53%), Positives = 48/63 (76%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 61 Query: 249 KAS 257 A+ Sbjct: 62 AAN 64
>CSPE_ECO57 (P0A974) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.0 bits (193), Expect = 3e-15 Identities = 34/63 (53%), Positives = 48/63 (76%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VEF++ G G + Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 61 Query: 249 KAS 257 A+ Sbjct: 62 AAN 64
>CSPG_SHIFL (P0A981) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 240 GRTKASDVT 266 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECOLI (P0A978) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 240 GRTKASDVT 266 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECOL6 (P0A979) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 240 GRTKASDVT 266 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECO57 (P0A980) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 240 GRTKASDVT 266 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPJ_SALTY (P39818) Cold shock-like protein cspJ| Length = 70 Score = 75.5 bits (184), Expect = 3e-14 Identities = 35/61 (57%), Positives = 45/61 (73%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +R+LNEN VEF V G Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPC_BACCR (P62171) Cold shock-like protein cspC| Length = 65 Score = 75.5 bits (184), Expect = 3e-14 Identities = 37/64 (57%), Positives = 45/64 (70%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTK 251 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 252 ASDV 263 A+ V Sbjct: 60 ANVV 63
>CSPC_BACCE (P62170) Cold shock-like protein cspC| Length = 65 Score = 75.5 bits (184), Expect = 3e-14 Identities = 37/64 (57%), Positives = 45/64 (70%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTK 251 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 252 ASDV 263 A+ V Sbjct: 60 ANVV 63
>CSPC_BACAN (P62169) Cold shock-like protein cspC| Length = 65 Score = 75.5 bits (184), Expect = 3e-14 Identities = 37/64 (57%), Positives = 45/64 (70%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTK 251 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 252 ASDV 263 A+ V Sbjct: 60 ANVV 63
>CSPA_SHIFL (P0A9Y4) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALTY (P0A9Y2) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALTI (P0A9Y3) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALEN (P0A9Y5) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECOLI (P0A9X9) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECOL6 (P0A9Y0) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECO57 (P0A9Y1) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 75.5 bits (184), Expect = 3e-14 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 249 KASDVTA 269 A +VT+ Sbjct: 62 AAGNVTS 68
>YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-binding protein| p54) (mRNP3) Length = 324 Score = 75.1 bits (183), Expect = 4e-14 Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 4/82 (4%) Frame = +3 Query: 42 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDV 209 + ++ + +V+GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + Sbjct: 32 QINKKLLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGET 91 Query: 210 VEFDVITGGDGRTKASDVTAPG 275 VEFDV+ G G +A++VT PG Sbjct: 92 VEFDVVEGEKG-AEAANVTGPG 112
>CSPA_MICLU (O30875) Major cold shock protein| Length = 67 Score = 75.1 bits (183), Expect = 4e-14 Identities = 36/63 (57%), Positives = 47/63 (74%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 GTVKWFN KG+GFI+PED S D+FVH SAI+ +G++ L END VEF+ G G +A+ Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKG-LQAA 62 Query: 258 DVT 266 +VT Sbjct: 63 NVT 65
>CSP7_STRCL (Q01761) Cold shock-like protein 7.0| Length = 66 Score = 74.7 bits (182), Expect = 6e-14 Identities = 36/55 (65%), Positives = 41/55 (74%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI+ + G D+FVH SAI A G+RSL EN VV FDV T G+G Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDV-THGEG 57
>CSPJ_SALTI (P58726) Cold shock-like protein cspJ| Length = 70 Score = 73.9 bits (180), Expect = 1e-13 Identities = 34/61 (55%), Positives = 44/61 (72%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +R+LNEN VEF G Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPC_SALTY (P0A9Y9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>CSPC_SALTI (P0A9Z0) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>CSPC_ECOLI (P0A9Y6) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>CSPC_ECOL6 (P0A9Y7) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>CSPC_ECO57 (P0A9Y8) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>CAPA_PSEFR (P72188) Cold shock protein capA (Cold acclimation protein A)| (C7.0) (Fragment) Length = 64 Score = 73.9 bits (180), Expect = 1e-13 Identities = 34/61 (55%), Positives = 41/61 (67%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M +R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V F G Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 60 Query: 240 G 242 G Sbjct: 61 G 61
>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein| p56) (mRNP4) Length = 336 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V+GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 35 KKVLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEF 94 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 95 DVVEGEKG-AEAANVTGPG 112
>CSPB_ECOLI (P36995) Cold shock-like protein cspB (CSP-B)| Length = 71 Score = 73.6 bits (179), Expect = 1e-13 Identities = 35/66 (53%), Positives = 43/66 (65%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFISP DGS D+FVH SAI+ D YR+L E V F + +G Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 240 GRTKAS 257 G A+ Sbjct: 61 GPAAAN 66
>CSPA_MYCTU (P63848) Probable cold shock protein A| Length = 67 Score = 73.6 bits (179), Expect = 1e-13 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDV 224 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VEF++ Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 52
>CSPA_MYCBO (P63849) Probable cold shock protein A| Length = 67 Score = 73.6 bits (179), Expect = 1e-13 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDV 224 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VEF++ Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 52
>CSPC_BUCAI (P57407) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 73.2 bits (178), Expect = 2e-13 Identities = 31/58 (53%), Positives = 44/58 (75%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 ++KG VKWFN +KGFGFI+P DGS D+FVH S+I+ +G+++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNGFKTLTEGQNVEFEIQDGQKG 59
>CSPD_SHIFL (P0A971) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/56 (58%), Positives = 38/56 (67%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECOLI (P0A968) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/56 (58%), Positives = 38/56 (67%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECOL6 (P0A969) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/56 (58%), Positives = 38/56 (67%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECO57 (P0A970) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/56 (58%), Positives = 38/56 (67%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>YB3_XENLA (Q00436) B box-binding protein (Protein YB3)| Length = 305 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 89 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 90 DVVEGEKG-AEAANVTGPG 107
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 109 DVVEGEKG-AEAANVTGPG 126
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 109 DVVEGEKG-AEAANVTGPG 126
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 109 DVVEGEKG-AEAANVTGPG 126
>YBOX1_RABIT (Q28618) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (p50) Length = 323 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 111 DVVEGEKG-AEAANVTGPG 128
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 111 DVVEGEKG-AEAANVTGPG 128
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 4/79 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 219 DVITGGDGRTKASDVTAPG 275 DV+ G G +A++VT PG Sbjct: 111 DVVEGEKG-AEAANVTGPG 128
>CSPI_ECOLI (P0A986) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/61 (52%), Positives = 44/61 (72%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +++L EN VEF + G Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPI_ECOL6 (P0A987) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/61 (52%), Positives = 44/61 (72%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +++L EN VEF + G Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPC_SHIFL (Q83RI9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 72.4 bits (176), Expect = 3e-13 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G ++L E VEF++ G G Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGLKTLAEGQNVEFEIQDGQKG-P 60 Query: 249 KASDVTA 269 A +VTA Sbjct: 61 AAVNVTA 67
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 72.0 bits (175), Expect = 4e-13 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 4/73 (5%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEFDVITGG 236 +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEFDV+ G Sbjct: 95 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 154 Query: 237 DGRTKASDVTAPG 275 G +A++VT PG Sbjct: 155 KG-ARAANVTGPG 166
>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (Contrin) (MSY2 homolog) Length = 364 Score = 71.6 bits (174), Expect = 5e-13 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 4/73 (5%) Frame = +3 Query: 69 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEFDVITGG 236 +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEFDV+ G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 237 DGRTKASDVTAPG 275 G +A++VT PG Sbjct: 153 KG-AEATNVTGPG 164
>CSPC_BACSU (P39158) Cold shock protein cspC| Length = 66 Score = 71.2 bits (173), Expect = 6e-13 Identities = 35/61 (57%), Positives = 44/61 (72%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +GTVKWFN KGFGFI E+G DD+FVH SAI++DG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQSDGFKSLDEGQKVSFDVEQGARGAQAA 61 Query: 255 S 257 + Sbjct: 62 N 62
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 70.9 bits (172), Expect = 8e-13 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 136 DVVEGEKG-AEAANVTGP 152
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 70.9 bits (172), Expect = 8e-13 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 136 DVVEGEKG-AEAANVTGP 152
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 70.9 bits (172), Expect = 8e-13 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 136 DVVEGEKG-AEAANVTGP 152
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 70.9 bits (172), Expect = 8e-13 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 84 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 143 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 144 DVVEGEKG-AEAANVTGP 160
>CSPA_RHIME (Q9Z3S6) Cold shock protein cspA| Length = 69 Score = 70.5 bits (171), Expect = 1e-12 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG-GDGRTKA 254 GTVKWFN TKGFGFI P+DG+ D+FVH SA++ G RSL E V +D++ G++ A Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGKSSA 63 Query: 255 SDVTA 269 ++ A Sbjct: 64 DNLRA 68
>YBOX1_XENLA (P21573) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 303 Score = 70.5 bits (171), Expect = 1e-12 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VEF Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 89 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 90 DVVEGEKG-AEAANVTGP 106
>CSPB_YERPE (P0A362) Cold shock-like protein cspB| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWF+ KGFGFISP DGS D+FVH SAI+ + Y++L+E VEF + G Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPB_YEREN (P0A363) Cold shock-like protein cspB| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VKWF+ KGFGFISP DGS D+FVH SAI+ + Y++L+E VEF + G Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 240 G 242 G Sbjct: 61 G 61
>CSPA_LISMO (P0A355) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 70.1 bits (170), Expect = 1e-12 Identities = 35/61 (57%), Positives = 43/61 (70%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +GTVKWFN KGFGFI E+G DD+FVH SAI+ DG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 255 S 257 + Sbjct: 62 N 62
>CSPA_LISIN (P0A356) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 70.1 bits (170), Expect = 1e-12 Identities = 35/61 (57%), Positives = 43/61 (70%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +GTVKWFN KGFGFI E+G DD+FVH SAI+ DG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 255 S 257 + Sbjct: 62 N 62
>CSP_ARTGO (P54584) Cold shock protein| Length = 67 Score = 69.7 bits (169), Expect = 2e-12 Identities = 32/64 (50%), Positives = 46/64 (71%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +GTVKWFN KGFGFI+P+D D+FVH S I+ G+++L+EN V+F++ G G +A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKG-PQA 61 Query: 255 SDVT 266 + VT Sbjct: 62 TGVT 65
>CSPA_STIAU (P72366) Cold shock-like protein cspA| Length = 68 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/55 (56%), Positives = 38/55 (69%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI+ + G +D+F H SAI DG+R+L E VEF+V G G Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHSAINMDGFRTLQEGQKVEFEVTRGPKG 58
>CAPB_PSESM (P0A105) Cold shock protein capB (Cold acclimation protein B)| Length = 69 Score = 68.9 bits (167), Expect = 3e-12 Identities = 36/68 (52%), Positives = 45/68 (66%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V F + T G Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQVSF-IATRGQ 58 Query: 240 GRTKASDV 263 +A +V Sbjct: 59 KGMQAEEV 66
>CAPB_PSEFR (P0A106) Cold shock protein capB (Cold acclimation protein B)| (C8.0) Length = 69 Score = 68.9 bits (167), Expect = 3e-12 Identities = 36/68 (52%), Positives = 45/68 (66%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V F + T G Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQVSF-IATRGQ 58 Query: 240 GRTKASDV 263 +A +V Sbjct: 59 KGMQAEEV 66
>YBOXH_APLCA (P41824) Y-box factor homolog (APY1)| Length = 253 Score = 68.2 bits (165), Expect = 5e-12 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 4/78 (5%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVEF 218 ++ + +V GTVKWFNV G+GFI+ +D +D+FVHQ+AI + RS+ + + VEF Sbjct: 26 KKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEF 85 Query: 219 DVITGGDGRTKASDVTAP 272 DV+ G G +A++VT P Sbjct: 86 DVVEGEKG-NEAANVTGP 102
>CSPA_VIBCH (Q9KN00) Cold shock-like protein cspA| Length = 70 Score = 67.8 bits (164), Expect = 7e-12 Identities = 33/70 (47%), Positives = 48/70 (68%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M +++ G+VKWFN TKGFGFIS ++G D+FVH +I ++G+++L E V F V G Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEGFKTLAEGQRVSFTVEQGKK 60 Query: 240 GRTKASDVTA 269 G +A+ VTA Sbjct: 61 G-PQAAQVTA 69
>CSPB_LISMO (P0A357) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 67.4 bits (163), Expect = 9e-12 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI E G DD+FVH SAI+ +G+++L+E VEF+++ G G Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRG 57
>CSPB_LISIN (P0A358) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 67.4 bits (163), Expect = 9e-12 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI E G DD+FVH SAI+ +G+++L+E VEF+++ G G Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRG 57
>CSPB_BACCE (Q45097) Cold shock-like protein cspB| Length = 65 Score = 67.4 bits (163), Expect = 9e-12 Identities = 33/62 (53%), Positives = 42/62 (67%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTK 251 + G VKWFN KGFGFI E GS+D+FVH SAI++DGY++L E V FD+ G G Sbjct: 1 MNGKVKWFNNEKGFGFIEME-GSEDVFVHFSAIQSDGYKALEEGQEVSFDITEGNRGPQA 59 Query: 252 AS 257 A+ Sbjct: 60 AN 61
>CSPA_PSEAE (P95459) Major cold shock protein cspA| Length = 69 Score = 67.4 bits (163), Expect = 9e-12 Identities = 33/61 (54%), Positives = 40/61 (65%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M R GTVKWFN KGFGFI+PE G +DLFVH +I+ G++SL E V F V+ G Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESG-NDLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 240 G 242 G Sbjct: 60 G 60
>CSPF_STRCO (P48859) Cold shock protein scoF| Length = 67 Score = 67.0 bits (162), Expect = 1e-11 Identities = 32/63 (50%), Positives = 39/63 (61%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 GTVKWFN KGFGFI+ + G D+F H S I A GYR L E V FD+ G G +A Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVFAHYSNINAQGYRELQEGQAVTFDITQGQKG-PQAE 62 Query: 258 DVT 266 ++T Sbjct: 63 NIT 65
>TAPB_PSEFR (P72192) Temperature acclimation protein B (E8.0) (Fragment)| Length = 63 Score = 66.6 bits (161), Expect = 2e-11 Identities = 33/61 (54%), Positives = 40/61 (65%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M +R GTVKWFN KGFGFI+PE G DLFVH AI+ +G++SL E V F + G Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 240 G 242 G Sbjct: 60 G 60
>CSPD_BACSU (P51777) Cold shock protein cspD| Length = 66 Score = 66.6 bits (161), Expect = 2e-11 Identities = 34/62 (54%), Positives = 43/62 (69%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 G VKWFN KGFGFI E G DD+FVH +AI+ DGY+SL E V F+++ G G +AS Sbjct: 4 GKVKWFNNEKGFGFIEVE-GGDDVFVHFTAIEGDGYKSLEEGQEVSFEIVEGNRG-PQAS 61 Query: 258 DV 263 +V Sbjct: 62 NV 63
>Y4CH_RHISN (P55390) Probable cold shock protein y4cH| Length = 69 Score = 66.6 bits (161), Expect = 2e-11 Identities = 27/50 (54%), Positives = 37/50 (74%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVI 227 GTVKWFN TKGFGFI P+DGS D+FVH SA++ G R L + + ++++ Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELV 54
>CSPD_BACCR (Q816H3) Cold shock-like protein cspD| Length = 66 Score = 66.2 bits (160), Expect = 2e-11 Identities = 33/63 (52%), Positives = 44/63 (69%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 G VKWFN KGFGFI E G DD+FVH SAI+ DG+++L E V F+++ G G +A+ Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRG-PQAA 61 Query: 258 DVT 266 +VT Sbjct: 62 NVT 64
>CSPD_BACAN (Q81K90) Cold shock-like protein cspD| Length = 66 Score = 66.2 bits (160), Expect = 2e-11 Identities = 33/63 (52%), Positives = 44/63 (69%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 G VKWFN KGFGFI E G DD+FVH SAI+ DG+++L E V F+++ G G +A+ Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRG-PQAA 61 Query: 258 DVT 266 +VT Sbjct: 62 NVT 64
>CSPB_BACSU (P32081) Cold shock protein cspB (Major cold shock protein)| Length = 67 Score = 66.2 bits (160), Expect = 2e-11 Identities = 32/65 (49%), Positives = 46/65 (70%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTK 251 ++G VKWFN KGFGFI E G DD+FVH SAI+ +G+++L E V F+++ G G + Sbjct: 2 LEGKVKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRG-PQ 59 Query: 252 ASDVT 266 A++VT Sbjct: 60 AANVT 64
>CSPV_VIBCH (Q9KL16) Cold shock protein cspV| Length = 70 Score = 65.5 bits (158), Expect = 3e-11 Identities = 31/70 (44%), Positives = 50/70 (71%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G+VKWFN TKGFGF++ ++G +D+FVH ++I+++G+++L E V F V G Sbjct: 1 MSTKMTGSVKWFNETKGFGFLTQDNGGNDVFVHFNSIQSEGFKTLAEGQRVSFIVEQGKK 60 Query: 240 GRTKASDVTA 269 G +AS+V A Sbjct: 61 G-PQASNVVA 69
>CSPA_BORPE (P0A352) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 3e-11 Identities = 30/55 (54%), Positives = 36/55 (65%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPA_BORPA (P0A354) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 3e-11 Identities = 30/55 (54%), Positives = 36/55 (65%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPA_BORBR (P0A353) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 3e-11 Identities = 30/55 (54%), Positives = 36/55 (65%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPG_SHEVI (Q9S170) Cold shock-like protein cspG| Length = 70 Score = 65.1 bits (157), Expect = 4e-11 Identities = 31/68 (45%), Positives = 42/68 (61%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M G VKWFN KGFGFI+ ++G DD+FVH +I +DG+++L E V F+V G Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVFVHFRSITSDGFKTLAEGQKVSFEVEQGQK 60 Query: 240 GRTKASDV 263 G A+ V Sbjct: 61 GLQAANVV 68
>CSP2_LACPL (P96349) Cold shock protein 2| Length = 66 Score = 64.7 bits (156), Expect = 6e-11 Identities = 31/55 (56%), Positives = 40/55 (72%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI+ EDG+ D+FVH SAI+ DG+++L+E V +D G G Sbjct: 4 GTVKWFNADKGFGFITGEDGT-DVFVHFSAIQTDGFKTLDEGQKVTYDEEQGDRG 57
>CSPA_SHEVI (Q9S1B7) Cold shock-like protein cspA| Length = 70 Score = 64.3 bits (155), Expect = 8e-11 Identities = 32/70 (45%), Positives = 47/70 (67%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M + GTVKWFN KGFGF++ ++G D+FVH AI ++G+++L+E V F+V G Sbjct: 1 MSDSNTGTVKWFNEDKGFGFLTQDNGGADVFVHFRAIASEGFKTLDEGQKVTFEVEQGPK 60 Query: 240 GRTKASDVTA 269 G +AS+V A Sbjct: 61 G-LQASNVIA 69
>CSPD_BACCE (Q45099) Cold shock-like protein cspD| Length = 66 Score = 64.3 bits (155), Expect = 8e-11 Identities = 32/63 (50%), Positives = 44/63 (69%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 G VKWFN KGFGFI E G +D+FVH SAI+ DG+++L E V F+++ G G +A+ Sbjct: 4 GKVKWFNGEKGFGFIEVE-GGEDVFVHFSAIQGDGFKTLEEGQEVSFEIVDGNRG-PQAA 61 Query: 258 DVT 266 +VT Sbjct: 62 NVT 64
>CSPA_STRP8 (P0A361) Major cold shock protein| Length = 67 Score = 63.5 bits (153), Expect = 1e-10 Identities = 31/56 (55%), Positives = 39/56 (69%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSPA_STRP3 (P0A360) Major cold shock protein| Length = 67 Score = 63.5 bits (153), Expect = 1e-10 Identities = 31/56 (55%), Positives = 39/56 (69%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSPA_STRP1 (P0C0F1) Major cold shock protein| Length = 67 Score = 63.5 bits (153), Expect = 1e-10 Identities = 31/56 (55%), Positives = 39/56 (69%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSP1_LACPL (P71478) Cold shock protein 1| Length = 66 Score = 63.5 bits (153), Expect = 1e-10 Identities = 32/62 (51%), Positives = 42/62 (67%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 GTVKWFN KG+GFI+ EDG +D+FVH SAI+ DG+++L E V FD + G A+ Sbjct: 4 GTVKWFNADKGYGFITGEDG-NDVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 258 DV 263 V Sbjct: 63 VV 64
>CSPA_STRP6 (Q5X9L4) Major cold shock protein| Length = 67 Score = 63.2 bits (152), Expect = 2e-10 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 +GTVKWFN KGFGFIS E+G D+F H SAI+ G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTSGFKTLEEGQKVAFDVEEGQRG 57
>CSPD_VIBCH (Q9KSW4) Cold shock-like protein cspD| Length = 76 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/55 (52%), Positives = 33/55 (60%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 GTVKWFN KGFGFI PE D+F H S I+ DGYR+L V + V G G Sbjct: 7 GTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQVSYQVEQGPKG 61
>CSPB_BACST (P42016) Cold shock protein cspB (Major cold shock protein)| Length = 66 Score = 62.4 bits (150), Expect = 3e-10 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +G VKWFN KG+GFI E GS D+FVH +AI+ +G++SL E V F+++ G G A Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKSLEEGQEVSFEIVQGNRGPQAA 61 Query: 255 SDV 263 + V Sbjct: 62 NVV 64
>CSPE_BACCR (Q81DK5) Cold shock-like protein cspE| Length = 67 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/55 (56%), Positives = 37/55 (67%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KGFGFI DG+D +FVH SAI DG++SL+E V F+V G G Sbjct: 5 GKVKWFNSEKGFGFIEVADGND-VFVHFSAITGDGFKSLDEGQEVSFEVEEGNRG 58
>CSPE_BACAN (Q81QK2) Cold shock-like protein cspE| Length = 67 Score = 62.0 bits (149), Expect = 4e-10 Identities = 31/55 (56%), Positives = 37/55 (67%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KGFGFI E G +D+FVH SAI DG++SL+E V F+V G G Sbjct: 5 GKVKWFNSEKGFGFIEVE-GGNDVFVHFSAITGDGFKSLDEGQEVSFEVEDGNRG 58
>CSPD_HAEIN (P46449) Cold shock-like protein cspD| Length = 72 Score = 62.0 bits (149), Expect = 4e-10 Identities = 29/55 (52%), Positives = 34/55 (61%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 G VKWFN KGFGFIS E D+F H S I+ DGYRSL V+F+V+ G Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKG 58
>CSPB_BACGO (P41018) Cold shock protein cspB (Fragment)| Length = 57 Score = 61.6 bits (148), Expect = 5e-10 Identities = 28/58 (48%), Positives = 38/58 (65%) Frame = +3 Query: 84 VKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKAS 257 +KWFN KGFGFI E G DD+FVH SAI+ +G++ L E V F+++ G G A+ Sbjct: 1 IKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKCLEEGQAVSFEIVEGNRGPQAAN 57
>CSPA_RICPR (Q9ZCP9) Cold shock-like protein cspA| Length = 70 Score = 61.2 bits (147), Expect = 6e-10 Identities = 28/55 (50%), Positives = 35/55 (63%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDV 224 M + G VKW+N TK FGFI ++G D+FVH+SAI A G SL E V FD+ Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAIDAAGLHSLEEGQEVIFDI 55
>CSP_THEMA (O54310) Cold shock-like protein| Length = 66 Score = 61.2 bits (147), Expect = 6e-10 Identities = 27/57 (47%), Positives = 42/57 (73%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 ++G VKWF+ KG+GFI+ ++G D +FVH SAI+ +G+++L E VVEF++ G G Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD-VFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKG 56
>CSPB_BACCL (P41016) Cold shock protein cspB| Length = 66 Score = 61.2 bits (147), Expect = 6e-10 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRTKA 254 +G VKWFN KG+GFI E GS D+FVH +AI+ +G+++L E V F+++ G G A Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAA 61 Query: 255 SDV 263 + V Sbjct: 62 NVV 64
>CSPE_BACCE (Q45100) Cold shock-like protein cspE (Fragment)| Length = 54 Score = 60.8 bits (146), Expect = 8e-10 Identities = 30/49 (61%), Positives = 35/49 (71%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDV 224 G VKWFN KGFGFI DGS D+FVH SAI DG++SL+E V F+V Sbjct: 5 GKVKWFNSEKGFGFIEVADGS-DVFVHFSAITGDGFKSLDEGQEVSFEV 52
>CSP_AQUAE (O67327) Cold shock-like protein| Length = 70 Score = 60.5 bits (145), Expect = 1e-09 Identities = 26/56 (46%), Positives = 40/56 (71%) Frame = +3 Query: 75 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 +GTVKWF+ KG+GFI+ ED + D+FVH + I+ +G+++L + VEFDV+ G Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKG 59
>CSPA_BACCR (Q81GQ6) Major cold shock protein cspA| Length = 67 Score = 60.5 bits (145), Expect = 1e-09 Identities = 30/57 (52%), Positives = 37/57 (64%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V F++ G G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEEGNRG 58
>CSPA_BACCE (Q45096) Major cold shock protein cspA| Length = 67 Score = 60.5 bits (145), Expect = 1e-09 Identities = 30/57 (52%), Positives = 37/57 (64%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V F++ G G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEDGNRG 58
>CSPA_BACAN (Q81TW8) Major cold shock protein cspA| Length = 67 Score = 60.5 bits (145), Expect = 1e-09 Identities = 30/57 (52%), Positives = 37/57 (64%) Frame = +3 Query: 72 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V F++ G G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEEGNRG 58
>CSPA_RICCN (Q92GV1) Cold shock-like protein cspA| Length = 70 Score = 59.7 bits (143), Expect = 2e-09 Identities = 27/55 (49%), Positives = 35/55 (63%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDV 224 M + G VKW+N TK FGFI ++G D+FVH+SA+ A G SL E V FD+ Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAVDAAGLHSLEEGQDVIFDL 55
>CSPA_SHIBO (Q53816) Major cold shock protein (Fragment)| Length = 46 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_SALVI (Q56178) Major cold shock protein (Fragment)| Length = 46 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_ENTAE (Q46664) Major cold shock protein (Fragment)| Length = 46 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_CITFR (Q46051) Major cold shock protein (Fragment)| Length = 46 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_KLEPN (Q48493) Major cold shock protein (Fragment)| Length = 46 Score = 57.4 bits (137), Expect = 9e-09 Identities = 25/44 (56%), Positives = 34/44 (77%) Frame = +3 Query: 102 TKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 +KGFGFISP+DGS D+FVH SAI++D +++LNE V F + G Sbjct: 1 SKGFGFISPKDGSKDVFVHFSAIQSDSFKTLNEGQEVSFTIENG 44
>CSPA_AERHY (Q44078) Major cold-shock protein (Fragment)| Length = 46 Score = 54.7 bits (130), Expect = 6e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFISP DGS D+FVH SAI+ G+++L+E VEF + G Sbjct: 2 KGFGFISPTDGSKDVFVHFSAIQTPGFKTLDEGQRVEFTIEQG 44
>CSPA_YEREN (Q56922) Major cold shock protein (Fragment)| Length = 46 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/43 (53%), Positives = 33/43 (76%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+P DGS D+FVH SAI+++ +++L+E VEF + G Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENG 44
>CSPA_AERSA (Q44317) Major cold-shock protein (Fragment)| Length = 46 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFISP DGS D+FVH SAI++ +++L+E VEF + G Sbjct: 2 KGFGFISPADGSKDVFVHFSAIQSTSFKTLDEGQRVEFTIEQG 44
>TAPA_PSEFR (P72191) Temperature acclimation protein A (E7.0) (Fragment)| Length = 59 Score = 50.8 bits (120), Expect = 9e-07 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +3 Query: 93 FNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDG 242 FN KGFGFI+PE G DLFVH AI+ +G++SL E V F + G G Sbjct: 1 FNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKG 49
>CSPA_STRDY (Q53984) Major cold shock protein (Fragment)| Length = 45 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFIS E+G D +F H SAI+ +G+++L E VEFDV G Sbjct: 2 KGFGFISTENGQD-VFAHFSAIQTNGFKTLEEGQKVEFDVEEG 43
>CSPA_STRPY (P0C0F0) Major cold shock protein (Fragment)| Length = 45 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/43 (53%), Positives = 30/43 (69%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFIS E+G D +F H SAI+ +G+++L E V FDV G Sbjct: 2 KGFGFISTENGQD-VFAHFSAIQTNGFKTLEEGQKVAFDVEEG 43
>CSPA_PHOMO (Q51929) Major cold shock protein (Fragment)| Length = 46 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGF++ +G D+FVH AI ++G+++L E V FDV G Sbjct: 2 KGFGFLTQNNGGADVFVHFRAIASEGFKTLTEGQKVSFDVEQG 44
>CSPA_PHOPO (Q52287) Major cold shock protein (Fragment)| Length = 46 Score = 45.4 bits (106), Expect = 4e-05 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +3 Query: 105 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 KGFGFI+ ++G D+FVH AI ++G+++L E V F+V G Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQG 44
>CSDC2_HUMAN (Q9Y534) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 153 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 62 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 104
>CSDC2_RAT (Q63430) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSDC2_MOUSE (Q91YQ3) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 44.3 bits (103), Expect = 8e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSPH_SALTY (P0A1D9) Cold shock-like protein cspH| Length = 70 Score = 40.0 bits (92), Expect = 0.002 Identities = 25/66 (37%), Positives = 33/66 (50%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G G I+P DG D+ VH SA + +L VEF I G Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_SALTI (P0A1E0) Cold shock-like protein cspH| Length = 70 Score = 40.0 bits (92), Expect = 0.002 Identities = 25/66 (37%), Positives = 33/66 (50%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G G I+P DG D+ VH SA + +L VEF I G Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 148 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 179 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 57 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 99
>CSPS_STRTR (P81622) Cold shock protein CspSt (Fragment)| Length = 21 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +3 Query: 78 GTVKWFNVTKGFGFISPED 134 GTVKWFN KGFGFI+ ED Sbjct: 3 GTVKWFNAEKGFGFITSED 21
>CSPH_SHIFL (P0A985) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G GFI P DG ++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECOLI (P0A982) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G GFI P DG ++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECOL6 (P0A983) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G GFI P DG ++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECO57 (P0A984) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G GFI P DG ++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 240 GRTKAS 257 G T A+ Sbjct: 61 GPTAAN 66
>CSPF_ECOLI (P0A976) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G G I+P DG D+ +H SA+ + VEF I G Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLR 60 Query: 240 GRTKAS 257 G + A+ Sbjct: 61 GPSAAN 66
>CSPF_ECOL6 (P0A977) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 36.2 bits (82), Expect = 0.022 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +3 Query: 60 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGD 239 M ++ G VK F+ G G I+P DG D+ +H SA+ + VEF I G Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLR 60 Query: 240 GRTKAS 257 G + A+ Sbjct: 61 GPSAAN 66
>SYK_LACPL (Q88Z28) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 499 Score = 30.8 bits (68), Expect = 0.94 Identities = 21/81 (25%), Positives = 35/81 (43%) Frame = +3 Query: 24 ARVLVLRFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNEN 203 A+ +V R + +R KG V GF I G L++ + + D Y + Sbjct: 57 AKQVVATIAGRMLAKRGKGKV-------GFADIWDRSGKMQLYIRKDVVGEDTYHIFKRS 109 Query: 204 DVVEFDVITGGDGRTKASDVT 266 D+ +F ITG +T ++T Sbjct: 110 DIGDFLGITGQVFKTDFGELT 130
>CSDE1_RAT (P18395) Cold shock domain-containing protein E1 (UNR protein)| Length = 798 Score = 30.8 bits (68), Expect = 0.94 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 +K R +G V + + FGFI D ++F H S K D +L D VEF I Sbjct: 180 KKKQARYQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 234 GDGRTKASDV 263 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVIT 230 R +R+ G V + FGFI + ++F H S D SL D+VE+ + Sbjct: 512 RNSNSKRLLGYVA--TLKDNFGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSK 568 Query: 231 GGDGRTKASDV 263 G + A V Sbjct: 569 GKGNKVSAEKV 579
>CSDE1_MOUSE (Q91W50) Cold shock domain-containing protein E1| Length = 798 Score = 30.8 bits (68), Expect = 0.94 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 +K R +G V + + FGFI D ++F H S K D +L D VEF I Sbjct: 180 KKKQARCQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 234 GDGRTKASDV 263 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVIT 230 R +R+ G V + FGFI + ++F H S D SL D+VE+ + Sbjct: 512 RNSNSKRLLGYVA--TLKDNFGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSK 568 Query: 231 GGDGRTKASDV 263 G + A V Sbjct: 569 GKGNKVSAEKV 579
>CSDE1_HUMAN (O75534) Cold shock domain-containing protein E1 (UNR protein)| (N-ras upstream gene protein) Length = 798 Score = 30.8 bits (68), Expect = 0.94 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 +K R +G V + + FGFI D ++F H S K D +L D VEF I Sbjct: 180 KKKQARCQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 234 GDGRTKASDV 263 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = +3 Query: 51 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVIT 230 R +R+ G V + FGFI + ++F H S D SL D+VE+ + Sbjct: 512 RNSNSKRLLGYVA--TLKDNFGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSK 568 Query: 231 GGDGRTKASDV 263 G + A V Sbjct: 569 GKGNKVSAEKV 579
>MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta| promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) (Putative NF-kappa-B-activating protein 031N) Length = 540 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = -3 Query: 274 PGAVTSDALVRPSPPVMTSNSTTSFSLRLR*PSALMADWWTKRSSLPSSGEMK 116 PGAV S+AL P+P + NST + + + P++++ S++P+ G + Sbjct: 333 PGAVPSNALTNPAPSKLPINSTRAGMVPSKVPTSMVLT-KVSASTVPTDGSSR 384
>SYK_STRP8 (Q8P1X6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEG 120 Query: 234 GDGRTKASDVT 266 RT +++ Sbjct: 121 EVMRTDMGELS 131
>SYK_STRP6 (Q5XD62) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEG 120 Query: 234 GDGRTKASDVT 266 RT +++ Sbjct: 121 EVMRTDMGELS 131
>MYO1B_RAT (Q05096) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (Myosin| heavy chain myr 1) Length = 1136 Score = 29.3 bits (64), Expect = 2.7 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Frame = +3 Query: 42 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSD-------DLFVHQSAIKADGYRSLNE 200 RF ++ + V N + SPE D +L H A+ + YRSL + Sbjct: 38 RFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRD 97 Query: 201 NDVVEFDVITG--GDGRTKAS 257 D + +ITG G G+T+AS Sbjct: 98 QDKDQCILITGESGAGKTEAS 118
>MYO1B_MOUSE (P46735) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MIH-L)| Length = 1107 Score = 29.3 bits (64), Expect = 2.7 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Frame = +3 Query: 42 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSD-------DLFVHQSAIKADGYRSLNE 200 RF ++ + V N + SPE D +L H A+ + YRSL + Sbjct: 38 RFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRD 97 Query: 201 NDVVEFDVITG--GDGRTKAS 257 D + +ITG G G+T+AS Sbjct: 98 QDKDQCILITGESGAGKTEAS 118
>DXS_GLOVI (Q7NP63) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 638 Score = 29.3 bits (64), Expect = 2.7 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 31/87 (35%) Frame = +3 Query: 66 ERVKGTVKWFNVTK----------GFGFISPEDGSD----------------DLFVHQSA 167 ER K TVK+ +T+ GF ++ P DG + +F+H Sbjct: 224 ERFKDTVKYMTMTRSKAGVIFEELGFTYLGPIDGHNLGDLIETFEFAHSLPGPVFLHAIT 283 Query: 168 IKADGYRSLNENDV-----VEFDVITG 233 +K GY +N + FD+ TG Sbjct: 284 VKGKGYEVAEQNQIKYHAQSAFDLATG 310
>RPOB_SYNEL (Q8DL55) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1108 Score = 28.9 bits (63), Expect = 3.6 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = -3 Query: 265 VTSDALVRPSPPVMTSNSTTSFSLRLR*PSALMADWWTKRSSLPS---SGEMKPNPLVTL 95 V ++ RP P SF + +R +L D +++S+PS GEMKP+P V L Sbjct: 1024 VKGQSIPRPGTP-------ESFKVLMRELQSLCLDISVRKASIPSFDDDGEMKPDPEVDL 1076
>SYK_STRP3 (Q8K880) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEG 120 Query: 234 GDGRTKASDVT 266 RT +++ Sbjct: 121 EVMRTDMGELS 131
>SYK_STRP1 (Q9A0V7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEG 120 Query: 234 GDGRTKASDVT 266 RT +++ Sbjct: 121 EVMRTDMGELS 131
>Y1387_METMP (P61652) UPF0103 protein MMP1387| Length = 284 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +3 Query: 102 TKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITGGDGRT 248 TK G +SP G +++ + A GY+ ++EN E I G T Sbjct: 44 TKPLGIVSPHAG----YIYSGPVAAHGYKKISENISGEITAIILGPNHT 88
>SYK_XANAC (Q8PLC6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 505 Score = 28.9 bits (63), Expect = 3.6 Identities = 22/76 (28%), Positives = 32/76 (42%) Frame = +3 Query: 39 LRFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEF 218 +R R M +RV G F I E G LF+ Q + D Y + DV + Sbjct: 70 VRMAGRLMAKRVMGKAS-------FAQIQDESGRVQLFL-QGNVLGDAYTAFKGWDVGDI 121 Query: 219 DVITGGDGRTKASDVT 266 + GG RTK +++ Sbjct: 122 VAVEGGLTRTKTGELS 137
>MYO1A_CHICK (P47807) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) Length = 1045 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +3 Query: 156 HQSAIKADGYRSLNENDVVEFDVITG--GDGRTKAS 257 H AI D YRSL + D + +ITG G G+T+AS Sbjct: 79 HIYAIADDAYRSLRDRDRDQCILITGESGAGKTEAS 114
>SYK_XYLFT (Q87EB3) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 506 Score = 28.5 bits (62), Expect = 4.7 Identities = 18/76 (23%), Positives = 31/76 (40%) Frame = +3 Query: 39 LRFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEF 218 +R R M +R+ G F I E G L + + + D Y + DV + Sbjct: 70 VRMAGRLMAKRLMGKAS-------FAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDVGDI 122 Query: 219 DVITGGDGRTKASDVT 266 + GG RT+ +++ Sbjct: 123 IAVEGGLTRTRTGELS 138
>SYK_XYLFA (Q9PEB6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 506 Score = 28.5 bits (62), Expect = 4.7 Identities = 18/76 (23%), Positives = 31/76 (40%) Frame = +3 Query: 39 LRFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEF 218 +R R M +R+ G F I E G L + + + D Y + DV + Sbjct: 70 VRMAGRLMAKRLMGKAS-------FAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDVGDI 122 Query: 219 DVITGGDGRTKASDVT 266 + GG RT+ +++ Sbjct: 123 IAVEGGLTRTRTGELS 138
>SYK_ENTFA (Q839A8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/71 (23%), Positives = 30/71 (42%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG GF + +G ++V + + + Y D+ +F +TG Sbjct: 71 RMMTKRGKGKA-------GFAHLQDREGQIQIYVRKDQVGDEAYELFKHADLGDFFGVTG 123 Query: 234 GDGRTKASDVT 266 +T +VT Sbjct: 124 QVMKTNTGEVT 134
>FTSK_SHEON (Q8EER3) DNA translocase ftsK| Length = 911 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +3 Query: 117 FISPEDGSDDLFVHQSAI-KADGYRSLNENDVVEFDVITGGDGRTKA 254 F +DG + +F ++ I + D S N++DV++FD T+A Sbjct: 336 FFEDDDGDEPVFHRETMIDEDDDTLSFNDDDVIDFDTKVSAGAVTQA 382
>RNR_THIFE (P54084) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein| homolog) (Fragment) Length = 439 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 Query: 66 ERVKGTVKWFNVTKGFGFISPEDGSDDLFV 155 E V+GTV GFGF+ PE G DLF+ Sbjct: 92 ELVRGTVSAH--PDGFGFLIPEAGGKDLFL 119
>SYK_STRMU (Q8DUW8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 496 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +R KG V GF + +G ++V + + D Y+ + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQIYVRKDTVGDDNYQIFKKADIGDFLGVEG 120 Query: 234 GDGRTKASDVT 266 RT +++ Sbjct: 121 EIMRTDMGELS 131
>MYO1B_HUMAN (O43795) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MYH-1c)| Length = 1136 Score = 27.7 bits (60), Expect = 7.9 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +3 Query: 144 DLFVHQSAIKADGYRSLNENDVVEFDVITG--GDGRTKAS 257 +L H A+ + YRSL + D + +ITG G G+T+AS Sbjct: 79 ELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEAS 118
>SYK_XANCP (Q9L3G6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 505 Score = 27.7 bits (60), Expect = 7.9 Identities = 21/71 (29%), Positives = 30/71 (42%) Frame = +3 Query: 54 RKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVEFDVITG 233 R M +RV G F I E G LF+ Q + D Y + DV + + G Sbjct: 75 RLMAKRVMGKAS-------FAQIQDESGRVQLFL-QGNVLGDAYTAFKGWDVGDIVAVEG 126 Query: 234 GDGRTKASDVT 266 G RTK +++ Sbjct: 127 GLTRTKTGELS 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,186,977 Number of Sequences: 219361 Number of extensions: 420542 Number of successful extensions: 1874 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 1804 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1825 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
