ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CS016_HUMAN (Q8ND99) Protein C19orf16 36 0.030
2SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1... 34 0.087
3SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1 34 0.087
4SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (S... 31 0.96
5PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20 31 0.96
6KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3... 30 1.3
7PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase... 30 1.3
8LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-bind... 30 1.6
9CF136_HUMAN (Q5SQH8) Protein C6orf136 30 1.6
10SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-rel... 30 2.1
11BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle pr... 30 2.1
12SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 30 2.1
13SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S... 29 2.8
14CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1) 29 2.8
15VE2_COPV (Q89420) Regulatory protein E2 29 2.8
16PAK4_MOUSE (Q8BTW9) Serine/threonine-protein kinase PAK 4 (EC 2.... 29 2.8
17SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like prot... 29 3.7
18SMG7_HUMAN (Q92540) Protein SMG7 (SMG-7 homolog) (EST1-like prot... 29 3.7
19CWC22_CANAL (Q59XY0) Pre-mRNA-splicing factor CWC22 29 3.7
20SPL12_ARATH (Q9S7P5) Squamosa promoter-binding-like protein 12 28 4.8
21LNT_PROMM (Q7V8K1) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 28 4.8
22ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disinteg... 28 4.8
23TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.... 28 4.8
24SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 28 6.2
25LTBP1_RAT (Q00918) Latent transforming growth factor beta-bindin... 28 6.2
26LTB1L_MOUSE (Q8CG19) Latent transforming growth factor beta-bind... 28 6.2
27RL5_ANOGA (O44248) 60S ribosomal protein L5 28 6.2
28TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repe... 28 6.2
29IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2 28 6.2
30IF2_XANCP (Q8P7U7) Translation initiation factor IF-2 28 6.2
31WETA_EMENI (P22022) Regulatory protein wetA 28 8.2
32GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H... 28 8.2
33ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenyl... 28 8.2
34KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C... 28 8.2
35SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos... 28 8.2

>CS016_HUMAN (Q8ND99) Protein C19orf16|
          Length = 567

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 23/63 (36%), Positives = 31/63 (49%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAP 239
           P  +AP+ P  + + +PA+PA SR AS  S SP +      P Q+    P  S  AP  P
Sbjct: 111 PSQKAPAVPAPSQK-APAIPAPSRKASAASASPRKASAVPAPPQKT---PPPSQKAPSVP 166

Query: 240 RRP 248
             P
Sbjct: 167 TIP 169



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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 34.3 bits (77), Expect = 0.087
 Identities = 24/61 (39%), Positives = 30/61 (49%)
 Frame = +3

Query: 63  RSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPR 242
           R R+PS P +  R SP+ PA      R    PPRR T   P +R +  PR    +PP  R
Sbjct: 546 RRRSPSPPPTRRRRSPS-PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR--YSPPIQR 602

Query: 243 R 245
           R
Sbjct: 603 R 603



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
 Frame = +3

Query: 60  PRSRAPSFPTS-------AARWSPAVPAQSRHASRWSRSPPRRGTQ 176
           P ++ P  P S       +  WSPAVP +   +   S SPPR   Q
Sbjct: 759 PAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQ 804



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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 34.3 bits (77), Expect = 0.087
 Identities = 24/61 (39%), Positives = 30/61 (49%)
 Frame = +3

Query: 63  RSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPR 242
           R R+PS P +  R SP+ PA      R    PPRR T   P +R +  PR    +PP  R
Sbjct: 560 RRRSPSPPPTRRRRSPS-PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR--YSPPIQR 616

Query: 243 R 245
           R
Sbjct: 617 R 617



 Score = 32.0 bits (71), Expect = 0.43
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
 Frame = +3

Query: 60  PRSRAPSFPTS-------AARWSPAVPAQSRHASRWSRSPPRRGTQ 176
           P ++ P  PTS       +  WSPAVP +   +   S SPPR   Q
Sbjct: 772 PAAKKPPAPTSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQ 817



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>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 54  SWPRSRAPS--FPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRS 215
           SW RSR+ S  +  S +R        SR   R+SRSP RRG   +P +R+ +  RS
Sbjct: 400 SWSRSRSRSRRYSRSRSRGRRHSDGGSRDGHRYSRSPARRGGY-VPRRRSRSRSRS 454



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>PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20|
          Length = 902

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSP----------PRRGTQRLPYQRAAAW- 206
           P+S  PSF  S + + P+ P  S  +S   RSP          P +    LP+  ++AW 
Sbjct: 764 PQSFQPSFSPSPSHFQPSAP--SSFSSSPVRSPAPSAPARRESPPKTLSFLPHPSSSAWQ 821

Query: 207 PRSSWLAPPAPRRP 248
           P S    PP P  P
Sbjct: 822 PASVDFLPPPPPPP 835



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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAW--PRSSWLAPP 233
           P  RA  F        PA    +R    W    P       PYQRAA    PR S  + P
Sbjct: 87  PNHRAAPFSHHQHAAKPAAAEPARDPDVWPPPTPVDHRPSPPYQRAARKDPPRRSEPSKP 146

Query: 234 APRRPG 251
           A R PG
Sbjct: 147 ANRAPG 152



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>PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1)
          Length = 1108

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 66  SRAPSFPTSAARWSPAVPA--QSRHASRWSRSPPRRGTQRL 182
           S  PSFPT+  R S        S H SRW RS  +R  Q L
Sbjct: 413 SSKPSFPTAQLRRSSGASGLLTSEHHSRWDRSGGKRPYQEL 453



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>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1821

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 66  SRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPRR 245
           +R PS    + R  P  PAQ+R ++   +  P   T+  P       P+ S  APP P R
Sbjct: 103 ARRPSRAQQSRRVQP--PAQTRRSTPLGQQQPAPRTRAAPALPRLGTPQRSGAAPPTPPR 160



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>CF136_HUMAN (Q5SQH8) Protein C6orf136|
          Length = 315

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
 Frame = +3

Query: 57  WPRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPR-----SSW 221
           WP S   + P+S   WSP               PPR  TQRLP       P+     S+W
Sbjct: 38  WPHSTTTTSPSSPLFWSPL--------------PPRLPTQRLPQVPPLPLPQIQALSSAW 83

Query: 222 LAPP 233
           +  P
Sbjct: 84  VVLP 87



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>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 54  SWPRSRAPSFPTSAARWSPAV--PAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLA 227
           S+P+ +AP  P S A+  P +  P +S  +   S +PP  G  RLP       P  S+  
Sbjct: 181 SYPQGQAP--PLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGG 238

Query: 228 P 230
           P
Sbjct: 239 P 239



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>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)|
          Length = 963

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLP 185
           P +  P +P      +P VP Q R     +R+PP     R P
Sbjct: 287 PNNHGPGYPEDQVPTAPPVPGQQRVPPTQTRNPPNPTNTRQP 328



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +3

Query: 63  RSRAPSFPTSAARWSPAVPAQSRHASRWSRSPP--RRGTQRLPYQRAAAWPRSSWLAPPA 236
           R R+PS P    R SP+ P + R  S    SPP  RR +   P +R  A P      PP 
Sbjct: 563 RRRSPSLPR---RRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP------PPP 613

Query: 237 PRR 245
           P+R
Sbjct: 614 PKR 616



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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 54  SWPRSRAPS--FPTSAARWSPAVPAQSRHASRWSRSPPRRG 170
           SW RSR+ S  +  S +R        SR   R+SRSP RRG
Sbjct: 406 SWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRG 446



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>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)|
          Length = 274

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 35  SDAGCLFLAQESGTVVPHLCRALESGGASAEQACVALE 148
           S+ G LF+ + +G ++P    A    GA+ E A VALE
Sbjct: 52  SEVGDLFVIRNAGNIIPPYGAANGGEGAAMEYALVALE 89



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>VE2_COPV (Q89420) Regulatory protein E2|
          Length = 385

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 87  TSAARWS-PAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSS 218
           TSAA  S P +P  S   S      PR+G  R P +R++ +PR S
Sbjct: 197 TSAAGTSGPELPGHSASGSGACSLTPRKGPSRRPGRRSSRFPRRS 241



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>PAK4_MOUSE (Q8BTW9) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 593

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAP 239
           P+S + S P + AR +P+      HAS    +PP R         A A P +    PP P
Sbjct: 240 PQSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPARAL------AAPAVPPAP--GPPGP 291

Query: 240 RRP 248
           R P
Sbjct: 292 RSP 294



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>SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)|
          Length = 1138

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 102  WSPAVPAQSRHASRWSRSPPRRGTQRLP 185
            WSP++PA S H++  S+SP       LP
Sbjct: 987  WSPSLPASSDHSTPASQSPHSSNPSSLP 1014



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>SMG7_HUMAN (Q92540) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)|
          Length = 1137

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 102  WSPAVPAQSRHASRWSRSPPRRGTQRLP 185
            WSP++PA S H++  S+SP       LP
Sbjct: 986  WSPSLPASSDHSTPASQSPHSSNPSSLP 1013



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>CWC22_CANAL (Q59XY0) Pre-mRNA-splicing factor CWC22|
          Length = 648

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 63  RSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQR 179
           RSR+ S   S++ ++    + SR  SR SRSP  RG QR
Sbjct: 560 RSRSYSRSASSSSYNSRSRSYSRSQSRSSRSPNPRGRQR 598



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>SPL12_ARATH (Q9S7P5) Squamosa promoter-binding-like protein 12|
          Length = 927

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 163 RGGERLQRDACLLCAGTAGLQRAAEVGNDGARLLGQEQAP 44
           + GE + R+   L  G  GLQ +  +GN  A LL  EQAP
Sbjct: 256 QAGEHIGRNLVGLLQGGGGLQASQNIGNLSA-LLSLEQAP 294



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>LNT_PROMM (Q7V8K1) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 499

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 63  RSRAPSFPTSAARWSPAVPAQSRHASRWSRSPP 161
           RS   + P S A W PA+P +S+ +    R  P
Sbjct: 219 RSSDATAPISVAAWQPAIPTRSKFSEEQQRRLP 251



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>ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase domain 12) (Meltrin alpha)
          Length = 909

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
 Frame = +3

Query: 60   PRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRR--------GTQRLPYQRA---AAW 206
            P  RAP  P+  AR  PA PA  +       +PP++         T RL +  A     W
Sbjct: 821  PLHRAPRAPSVPARPLPAKPALRQAQGTCKPNPPQKPLPADPLARTTRLTHALARTPGQW 880

Query: 207  PRSSWLAP--PAPRRP 248
                 LAP  PAP+ P
Sbjct: 881  ETGLRLAPLRPAPQYP 896



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>TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1055

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +3

Query: 75   PSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAP 239
            P+ P + A  S  VP    H   WS  PP  G          AW + + LAPP P
Sbjct: 940  PAPPPAPAWPSRPVPRSGAH---WSHGPPPPGMP------PPAWRQPALLAPPGP 985



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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
 Frame = +3

Query: 60  PRSRAPSFPTS-------AARWSPAVPAQSRHASRWSRSPPRRGTQ 176
           P ++ P  P S       +  WSPAVPA+   +   S SP R   Q
Sbjct: 800 PAAKKPPAPPSPVQSQSPSTNWSPAVPAKKAKSPTPSLSPARNSDQ 845



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>LTBP1_RAT (Q00918) Latent transforming growth factor beta-binding protein 1|
           precursor (LTBP-1) (Transforming growth factor
           beta-1-binding protein 1) (TGF-beta-1-BP-1)
           (Transforming growth factor beta-1-masking protein,
           large subunit)
          Length = 1712

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = +3

Query: 96  ARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPRRPG 251
           AR+S +  A S   SR    PP   T+R      AA P      PP P RPG
Sbjct: 58  ARYSRSSTATS---SRSLAGPPAERTRRTSQPGGAALPGLRSPLPPEPARPG 106



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>LTB1L_MOUSE (Q8CG19) Latent transforming growth factor beta-binding protein,|
           isoform 1L precursor (LTBP-1) (Transforming growth
           factor beta-1-binding protein 1) (TGF-beta1-BP-1)
          Length = 1713

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = +3

Query: 96  ARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPRRPG 251
           AR+S +  A S   SR    PP   T+R      AA P      PP P RPG
Sbjct: 58  ARYSRSSTAAS---SRALAGPPAERTRRTSQPGGAALPGLRSPLPPEPARPG 106



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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +3

Query: 60  PRSRAPSFPTSAARW----SPAVPAQSRHA--SRWSRSPPRRGTQRLPYQRAAAWPRSSW 221
           PR R+P    S  RW    SP    +SR    + W RS P    +RLP +R   +  S W
Sbjct: 257 PRRRSPR---SGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRRPFFFSSWW 313



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>TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repeat protein 9)|
           (Fragment)
          Length = 336

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 25/69 (36%), Positives = 29/69 (42%)
 Frame = -1

Query: 250 PGRRGAGGASHEERGHAAAR*YGSRCVPRRGGERLQRDACLLCAGTAGLQRAAEVGNDGA 71
           PGRRG GG      G  AAR        RRGG R++R       G+A    A   GN   
Sbjct: 91  PGRRGGGGGG----GQIAAR------TRRRGGGRMER------KGSA----AGAKGNPSP 130

Query: 70  RLLGQEQAP 44
              G+ Q P
Sbjct: 131 PAAGEGQRP 139



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>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2|
          Length = 902

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 54  SWPRSRAPSFPTSAARWSPAVPAQSRHASR 143
           S P +RAPS P+SA R  PA PA +  ASR
Sbjct: 197 SAPAARAPSSPSSAPR--PARPAGASPASR 224



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>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2|
          Length = 916

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 54  SWPRSRAPSFPTSAARWSPAVPAQSRHASR 143
           S P +RAPS P+SA R  PA PA +  ASR
Sbjct: 211 SAPAARAPSSPSSAPR--PARPAGASPASR 238



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>WETA_EMENI (P22022) Regulatory protein wetA|
          Length = 555

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 54  SWPRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPP 233
           S P   + S  T A +++P +   S H + WS  P     +   YQ+         +A P
Sbjct: 301 SMPSWHSESLNTPAFQYTPEL---SDHQTWWSPMPSEVAQRHASYQQ--------MIASP 349

Query: 234 APRRP 248
           AP+RP
Sbjct: 350 APQRP 354



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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = +3

Query: 84  PTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPRRP 248
           P S A  SPA P+    A     SPP     R P+      P S    PP+P  P
Sbjct: 246 PPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPP 300



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>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1262

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 21/66 (31%), Positives = 26/66 (39%)
 Frame = -1

Query: 253 RPGRRGAGGASHEERGHAAAR*YGSRCVPRRGGERLQRDACLLCAGTAGLQRAAEVGNDG 74
           R G  G  G+  + RG A     GS   P  GG      A     GT    R+ EVG + 
Sbjct: 107 RGGDDGGRGSRRQRRGAAGG---GSTRAPPAGGSGSSAAAAAAAGGTEVRPRSVEVGLEE 163

Query: 73  ARLLGQ 56
            R  G+
Sbjct: 164 RRGKGR 169



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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +3

Query: 93  AARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWLAPPAPRRPG 251
           A++  PA P Q         SPP         Q A   P +S   PPAPR PG
Sbjct: 16  ASKQQPAPPPQP------PESPPPPPLPPQQQQPAQPGPAASPAGPPAPRGPG 62



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>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 22/66 (33%), Positives = 31/66 (46%)
 Frame = +3

Query: 45   GACSWPRSRAPSFPTSAARWSPAVPAQSRHASRWSRSPPRRGTQRLPYQRAAAWPRSSWL 224
            G  S P+S A +   SA R +P   +++   S+ S   P       P +  AA+P  S L
Sbjct: 1203 GVISAPQSHARA---SAGRLTPESQSKTSETSKGSTFLPE------PLKPQAAFPPQSSL 1253

Query: 225  APPAPR 242
             PPA R
Sbjct: 1254 PPPAQR 1259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,818,890
Number of Sequences: 219361
Number of extensions: 390987
Number of successful extensions: 2187
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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