>EMP24_YEAST (P32803) Endosomal P24B protein precursor (24 kDa endomembrane|
           protein) (Basic 24 kDa late endocytic intermediate
           component)
          Length = 203

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 123 PRKSAQL*PDLALRGPIRHPINPGVCPLGHGRLIASGPWE 242
           P+ S+QL  D  + GP RH +   V    HG +  S P++
Sbjct: 54  PQSSSQLTGDFIIYGPERHEVLKTVRDTSHGEITLSAPYK 93

>HGD_XANAC (Q8PQ74) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 458

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
 Frame = +1

Query: 121 HPGNPPSSSQIWLCA--DQFATQ*IRGCVPLGMVA*SRPAHG---------------NVG 249
           HP  P  + Q ++    ++FAT+ + G +P+G  +  R AHG                  
Sbjct: 17  HPDAPMHNDQRYMTGFGNEFATEAVAGSLPIGQNSPQRVAHGLYAEQLSGTAFTAPRGQN 76

Query: 250 GRQWRCRMRTRRVH 291
            R W  R+R   VH
Sbjct: 77  RRSWLYRIRPAAVH 90

>GUNA_CELFI (P07984) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 449

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 233 AGRDQATMPK-GTHPRIYWVANWSAQSQIWLELGGFPG 123
           +G D+A + K    P+ YWV NW+  S    E+  + G
Sbjct: 190 SGTDKALLEKIALTPQAYWVGNWADASHAQAEVADYTG 227

>RPOBC_WOLPM (Q73IW9) Bifunctional DNA-directed RNA polymerase, beta and beta'|
            chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase
            beta chain (Transcriptase beta chain) (RNA polymerase
            beta subunit); DNA-directed RNA polymerase beta' chain
            (Transcri
          Length = 2837

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 159  LRGPIRHPINPGVCPLGHGRLIASG 233
            +R P+   I+PGVC L +GR +A+G
Sbjct: 2303 IRSPLTCEISPGVCSLCYGRDLATG 2327

>CRUP_STRCO (Q9ACU1) Bifunctional crtB/uppS protein [Includes: Phytoene|
           synthase (EC 2.5.1.-); Undecaprenyl pyrophosphate
           synthetase 3 (EC 2.5.1.31) (UPP synthetase 3)
           (Di-trans,poly-cis-decaprenylcistransferase 3)
           (Undecaprenyl diphosphate synthase 3) (U
          Length = 564

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 236 WAGRDQATMPKGTHPRIYWVANWSAQSQIWLELGGFPGCYVRL 108
           WA  +  T+P  T P +Y +A+WSA +   ++ G   G   RL
Sbjct: 57  WAAAE--TLPVETRPSLYAIASWSAYTDRIIDEGPLEGREERL 97

>RPOBC_WOLTR (Q5GRY9) Bifunctional DNA-directed RNA polymerase, beta and beta'|
            chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase
            beta chain (Transcriptase beta chain) (RNA polymerase
            beta subunit); DNA-directed RNA polymerase beta' chain
            (Transcri
          Length = 2839

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 159  LRGPIRHPINPGVCPLGHGRLIASG 233
            +R P+   ++PGVC L +GR +A+G
Sbjct: 2306 IRSPLTCEVSPGVCSLCYGRDLATG 2330

>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 765

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 225 RSSDHAQGDTPPDLLGGELVRAKPNLARAGRISG 124
           R+ DH Q  TPP  L G+     P LAR G  +G
Sbjct: 707 RAEDHPQLKTPPSKLNGQ----SPGLARLGLATG 736

>K1949_PIG (Q767M0) Protein KIAA1949 homolog|
          Length = 618

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 427 GGAGEEDPEYGDLRPPPDRAASQQP 353
           GG+ +++ E G+LRPPP    S  P
Sbjct: 416 GGSRQQEEEAGELRPPPAAPLSPPP 440

>LUCI_VARHI (P17554) Luciferin 2-monooxygenase precursor (EC 1.13.12.6)|
           (Cypridina-type luciferase)
          Length = 555

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 189 DLLGGELVRAKPNLARAGRISGVLCAIE 106
           D+LGG  VR  P+ A  G ISG+   +E
Sbjct: 199 DILGGRSVRIAPDTANKGLISGICGNLE 226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,148,649
Number of Sequences: 219361
Number of extensions: 973083
Number of successful extensions: 3834
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3834
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)