>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 337      ggagggggagtgcccaaggctgctgcgatgccgcgcgatccggtggtgggcgaaggtcgc 396
                |||||||||||||||     ||||||| || ||||||||||||||||||||| |||||||
Sbjct: 16576937 ggagggggagtgccccgccgtgctgcggtggcgcgcgatccggtggtgggcgcaggtcgc 16576878

                                        
Query: 397      cgtactcgggatcttcctcgccgg 420
                ||  ||||||||| ||||||||||
Sbjct: 16576877 cgccctcgggatcctcctcgccgg 16576854



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 23       tccgctccaatgccgttgcctccctcct 50
                |||||||||||||||||||||| |||||
Sbjct: 16577320 tccgctccaatgccgttgcctctctcct 16577293



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 280      cggcgagtacatgagtatcccggaggatgtgga 312
                |||||||||||| || ||||||||||| |||||
Sbjct: 16577006 cggcgagtacatcaggatcccggaggacgtgga 16576974



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 370     cgcgatccggtggtgggcga 389
               ||||||||||||||||||||
Sbjct: 7078584 cgcgatccggtggtgggcga 7078603

>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0003B09
          Length = 161813

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                         
Query: 337   ggagggggagtgcccaaggctgctgcgatgccgcgcgatccggtggtgggcgaaggtcgc 396
             |||||||||||||||     ||||||| || ||||||||||||||||||||| |||||||
Sbjct: 67557 ggagggggagtgccccgccgtgctgcggtggcgcgcgatccggtggtgggcgcaggtcgc 67498

                                     
Query: 397   cgtactcgggatcttcctcgccgg 420
             ||  ||||||||| ||||||||||
Sbjct: 67497 cgccctcgggatcctcctcgccgg 67474



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 23    tccgctccaatgccgttgcctccctcct 50
             |||||||||||||||||||||| |||||
Sbjct: 67940 tccgctccaatgccgttgcctctctcct 67913



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 280   cggcgagtacatgagtatcccggaggatgtgga 312
             |||||||||||| || ||||||||||| |||||
Sbjct: 67626 cggcgagtacatcaggatcccggaggacgtgga 67594

>dbj|AK065880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C23, full
           insert sequence
          Length = 1483

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 337 ggagggggagtgcccaaggctgctgcgatgccgcgcgatccggtggtgggcgaaggtcgc 396
           |||||||||||||||     ||||||| || ||||||||||||||||||||| |||||||
Sbjct: 399 ggagggggagtgccccgccgtgctgcggtggcgcgcgatccggtggtgggcgcaggtcgc 458

                                   
Query: 397 cgtactcgggatcttcctcgccgg 420
           ||  ||||||||| ||||||||||
Sbjct: 459 cgccctcgggatcctcctcgccgg 482



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 23 tccgctccaatgccgttgcctccctcct 50
          |||||||||||||||||||||| |||||
Sbjct: 16 tccgctccaatgccgttgcctctctcct 43



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 280 cggcgagtacatgagtatcccggaggatgtgga 312
           |||||||||||| || ||||||||||| |||||
Sbjct: 330 cggcgagtacatcaggatcccggaggacgtgga 362

>gb|AY110850.1| Zea mays CL8564_1 mRNA sequence
          Length = 1138

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 357 tgctgcgatgccgcgcgatccggtggtgggcgaaggtcgccgtactcgggatcttcct 414
           ||||||| ||| ||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 804 tgctgcggtgcagcgcgatccggtggtgggccaaggtcgccgtgcttgggatcttcct 747

>ref|XM_968240.1| PREDICTED: Tribolium castaneum similar to Leucine-rich repeat
            transmembrane protein FLRT2 precursor (Fibronectin-like
            domain-containing leucine-rich transmembrane protein 2)
            (LOC662123), mRNA
          Length = 1161

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 302  gaggatgtggacgcgatcaaggaggcgg 329
            ||||||||||||| ||||||||||||||
Sbjct: 1066 gaggatgtggacgagatcaaggaggcgg 1093

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 408     tcttcctcgccggcgccaccgc 429
               ||||||||||||||||||||||
Sbjct: 3515052 tcttcctcgccggcgccaccgc 3515073

>ref|XM_528123.1| PREDICTED: Pan troglodytes similar to THAP domain protein 1
           (LOC472751), mRNA
          Length = 642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 324 aggaggcggtaaaggaggtggggga 300

>ref|NM_199003.1| Homo sapiens THAP domain containing, apoptosis associated protein 1
           (THAP1), transcript variant 2, mRNA
          Length = 1993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 365 aggaggcggtaaaggaggtggggga 341

>ref|NM_018105.2| Homo sapiens THAP domain containing, apoptosis associated protein 1
           (THAP1), transcript variant 1, mRNA
          Length = 2189

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 561 aggaggcggtaaaggaggtggggga 537

>gb|BC021721.2| Homo sapiens THAP domain containing, apoptosis associated protein
           1, transcript variant 1, mRNA (cDNA clone MGC:33014
           IMAGE:4795229), complete cds
          Length = 1190

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 535 aggaggcggtaaaggaggtggggga 511

>emb|CR858327.1| Pongo pygmaeus mRNA; cDNA DKFZp459G2329 (from clone DKFZp459G2329)
          Length = 2063

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 528 aggaggcggtaaaggaggtggggga 504

>emb|CR607366.1| full-length cDNA clone CS0DL008YH12 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1856

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 280 aggaggcggtaaaggaggtggggga 256

>dbj|AK001339.1| Homo sapiens cDNA FLJ10477 fis, clone NT2RP2000097
          Length = 2167

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 555 aggaggcggtaaaggaggtggggga 531

>gb|AC009634.9| Homo sapiens chromosome 8, clone RP11-413C18, complete sequence
          Length = 205638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 321    aggaggcggtaaaggaggaggggga 345
              |||||||||||||||||| ||||||
Sbjct: 177666 aggaggcggtaaaggaggtggggga 177642

>gb|AC087533.7| Homo sapiens, clone RP11-89A4, complete sequence
          Length = 154179

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 321   aggaggcggtaaaggaggaggggga 345
             |||||||||||||||||| ||||||
Sbjct: 37914 aggaggcggtaaaggaggtggggga 37890

>emb|CR457256.1| Homo sapiens full open reading frame cDNA clone RZPDo834D119D for
           gene THAP1, THAP domain containing, apoptosis associated
           protein 1; complete cds, incl. stopcodon
          Length = 642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 324 aggaggcggtaaaggaggtggggga 300

>dbj|AK223231.1| Homo sapiens mRNA for THAP domain containing, apoptosis associated
           protein 1 isoform 1 variant, clone: STM02759
          Length = 1191

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 540 aggaggcggtaaaggaggtggggga 516

>emb|AL832077.1|HSM803384 Homo sapiens mRNA; cDNA DKFZp313G1223 (from clone DKFZp313G1223)
          Length = 1959

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 321 aggaggcggtaaaggaggaggggga 345
           |||||||||||||||||| ||||||
Sbjct: 339 aggaggcggtaaaggaggtggggga 315

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 385     ggcgaaggtcgccgtactcg 404
               ||||||||||||||||||||
Sbjct: 1223791 ggcgaaggtcgccgtactcg 1223810

>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     cggtaaaggaggagggggag 346
               ||||||||||||||||||||
Sbjct: 1220250 cggtaaaggaggagggggag 1220231

>gb|AC116668.6| Trypanosoma brucei chromosome 5 clone RPCI93-45E22, complete sequence
          Length = 141628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cggtaaaggaggagggggag 346
             ||||||||||||||||||||
Sbjct: 35364 cggtaaaggaggagggggag 35345

>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057M18 map near E10005S, complete sequence
          Length = 140920

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   tcctcgccggcgccaccgcg 430
             ||||||||||||||||||||
Sbjct: 82958 tcctcgccggcgccaccgcg 82977

>gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7, complete sequence
          Length = 170328

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    cggtaaaggaggagggggag 346
              ||||||||||||||||||||
Sbjct: 151353 cggtaaaggaggagggggag 151334

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gccgccagtggcggtgccgg 270
               ||||||||||||||||||||
Sbjct: 1833793 gccgccagtggcggtgccgg 1833774

>ref|XM_819929.1| Trypanosoma brucei TREU927 clone RPCI93-6E7 hypothetical protein
           (Tb927.5.3930) partial mRNA
          Length = 1368

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cggtaaaggaggagggggag 346
           ||||||||||||||||||||
Sbjct: 121 cggtaaaggaggagggggag 102

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    cgatccggtggtgggcgaag 391
              ||||||||||||||||||||
Sbjct: 782061 cgatccggtggtgggcgaag 782080

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 411      tcctcgccggcgccaccgcg 430
                ||||||||||||||||||||
Sbjct: 13725149 tcctcgccggcgccaccgcg 13725168

>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 361   gcgatgccgcgcgatccggtggtgggcg 388
             ||||||||||||||||| | ||||||||
Sbjct: 97234 gcgatgccgcgcgatcctgcggtgggcg 97261

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 361     gcgatgccgcgcgatccggtggtgggcg 388
               ||||||||||||||||| | ||||||||
Sbjct: 1975719 gcgatgccgcgcgatcctgcggtgggcg 1975746

>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0066H10
          Length = 200968

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    cgcgatccggtggtgggcga 389
              ||||||||||||||||||||
Sbjct: 105273 cgcgatccggtggtgggcga 105292

>dbj|AK073048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C03, full
            insert sequence
          Length = 3157

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  tcctcgccggcgccaccgcg 430
            ||||||||||||||||||||
Sbjct: 2746 tcctcgccggcgccaccgcg 2765

>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome
          Length = 1138011

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 307    tgtggacgcgatcaaggaggcggtaaag 334
              |||||||||| |||| ||||||||||||
Sbjct: 391035 tgtggacgcgttcaatgaggcggtaaag 391062

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 411      tcctcgccggcgccaccgcg 430
                ||||||||||||||||||||
Sbjct: 13807147 tcctcgccggcgccaccgcg 13807166


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,336,480
Number of Sequences: 3902068
Number of extensions: 2336480
Number of successful extensions: 82901
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82450
Number of HSP's gapped (non-prelim): 451
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)