ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44b11 |
|---|---|
| Clone Library Name | barley_pub |
>BSPB_POPDE (Q09117) Bark storage protein B precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +1 Query: 205 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGXSVVMVMTGLSMLN 375 +GLV + + +S + ++DI GRRF GT+ G S+V V TG +N Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSHSVN 85
>BSPA_POPDE (Q07469) Bark storage protein A precursor| Length = 312 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +1 Query: 205 VGLVVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGXSVVMVMTGLSMLN 375 +GLV + + +S + ++DI GRRF GT+ G S+V V TG +N Sbjct: 29 LGLVFTSDNNERALQDSGLYSPDSEDSSVDIAGRRFHSGTLNGSSIVYVKTGSPSVN 85
>ASSY_STRMU (Q8CWZ0) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 396 Score = 32.0 bits (71), Expect = 0.37 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = -3 Query: 333 AFDGSKAKPSPLDVHVRDALAG-HEAGRLEH-RNHLVGVGHDEADERPGAV 187 A DG + K + L + + LAG H GR++H N LVG+ E E PGAV Sbjct: 227 ALDGQEMKLADL-IQKLNVLAGKHGVGRIDHVENRLVGIKSREIYECPGAV 276
>ASSY_BACLD (Q65G67) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 403 Score = 31.2 bits (69), Expect = 0.64 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -3 Query: 333 AFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 187 + DG+ S L + + + H GR++H N LVG+ E E PGA+ Sbjct: 229 SIDGTHYPLSDLILKLNELAGAHGVGRIDHVENRLVGIKSREVYECPGAM 278
>ASSY_GEOKA (Q5KW94) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 406 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 318 KAKPSPLDVHVRDALAG-HEAGRLEH-RNHLVGVGHDEADERPGAV 187 KA P + +ALAG H GR++H N LVG+ E E PGA+ Sbjct: 232 KAYPLAQLILELNALAGKHGVGRIDHVENRLVGIKSREVYECPGAI 277
>CDC54_YEAST (P30665) Cell division control protein 54| Length = 933 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = +1 Query: 214 VVPNTYEMVPVLESPSFVASKSIPNMDIQGRRFRFGTIEGXSVVMVMTGLSMLN 375 VVPN + P L SP+ S S DI GR +G + G S LN Sbjct: 19 VVPNPDSVPPQLSSPALFYSSSSSQGDIYGRNNSQNLSQGEGNIRAAIGSSPLN 72
>HUTI_PSESM (Q87UL9) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 401 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/67 (25%), Positives = 26/67 (38%) Frame = -3 Query: 351 DHDDAXAFDGSKAKPSPLDVHVRDALAGHEAGRLEHRNHLVGVGHDEADERPGAVRPADG 172 +HD+ G+ P +D H G+ +G E R L GV + E G + Sbjct: 46 EHDNCIDLGGAWVTPGLIDCHTHTVFGGNRSGEFEQR--LQGVSYAEIAAAGGGIASTVR 103 Query: 171 CPRLLSD 151 R S+ Sbjct: 104 ATRAASE 110
>NORR2_RALEU (Q9K4U8) Nitric oxide reductase transcription regulator norR2| Length = 521 Score = 29.6 bits (65), Expect = 1.9 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = -3 Query: 321 SKAKPSPLDVHVRDALAGHEAGRLEHRNHLVGVGHDEADERPGAVRPADGCPRLLSDV 148 S+ + PL VHV A E H G ERPG ADG P L +V Sbjct: 238 SRRRAQPL-VHVNCAALPESLAESELFGHARGAFSGATGERPGRFEAADGQPLFLDEV 294
>ASSY_STRT2 (Q5M2K2) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 399 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 333 AFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 187 A +G + K + L + H GR++H N LVG+ E E PGA+ Sbjct: 227 ALNGKEMKLADLIQEMNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI 276
>ASSY_STRT1 (Q5LXZ8) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 399 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 333 AFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 187 A +G + K + L + H GR++H N LVG+ E E PGA+ Sbjct: 227 ALNGKEMKLADLIQEMNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI 276
>ASSY_STRR6 (Q8DRI5) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 398 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 333 AFDGSKAKPSPLDVHVRDALAGHEAGRLEH-RNHLVGVGHDEADERPGAV 187 + +G K + L + + H GR++H N LVG+ E E PGAV Sbjct: 227 SLNGEVLKLADLIQKLNEIAGKHGVGRIDHVENRLVGIKSREIYECPGAV 276
>ZEP1_MOUSE (Q03172) Zinc finger protein 40 (Transcription factor alphaA-CRYBP1)| (Alpha A-crystallin-binding protein I) (Alpha A-CRYBP1) Length = 2688 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +2 Query: 173 PSAGRTAPGRSSASSCPTPT 232 PSAG PGRS A + P PT Sbjct: 2618 PSAGHVLPGRSPAQAQPAPT 2637
>Y2293_MYCTU (Q50673) Hypothetical protein Rv2293c/MT2350 precursor| Length = 246 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +1 Query: 304 RRFRFGTIEGXSVVMVMTGLSMLN 375 RR+ G+I G V++ MTG+ ++N Sbjct: 69 RRYYLGSISGKKVIVAMTGIGLVN 92
>MCM2_XENLA (P55861) DNA replication licensing factor MCM2 (x.MCM2)| Length = 886 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -3 Query: 351 DHDDAXAFDGSKAKPSPLDVHVRDALAGHEAGRLEHRNHLVGVGHDEADERPG-----AV 187 D +D S+ + + + +RD G E GR+ R L+ +E ++RP A Sbjct: 82 DEEDVEDLTASQREAAEQSMRMRDREMGRELGRM--RRGLLYDSDEEEEDRPARKRRMAE 139 Query: 186 RPADGCP 166 R A+G P Sbjct: 140 RAAEGAP 146
>ZN358_HUMAN (Q9NW07) Zinc finger protein 358| Length = 481 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -3 Query: 324 GSKAKPSPLDVHVRDALAGHEAG 256 GS++ PSP V D AGH+AG Sbjct: 394 GSRSTPSPTPVESSDPKAGHDAG 416
>RS5_CAMJR (Q5HSA7) 30S ribosomal protein S5| Length = 147 Score = 26.2 bits (56), Expect(2) = 4.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 246 HRNHLVGVGHDEADERPGAVRPA 178 +R LVGVG+ +A E P A+R A Sbjct: 39 NRKGLVGVGYGKAKEVPDAIRKA 61 Score = 20.8 bits (42), Expect(2) = 4.8 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = -1 Query: 170 AHVF*VMYPSAAVAISVTATRTTAMSCCRTPPMVELAPFLDM 45 AH V Y ++ + + + T ++ T P+VELA D+ Sbjct: 80 AHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDI 121
>RS5_CAMJE (Q9PLY8) 30S ribosomal protein S5| Length = 147 Score = 26.2 bits (56), Expect(2) = 4.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 246 HRNHLVGVGHDEADERPGAVRPA 178 +R LVGVG+ +A E P A+R A Sbjct: 39 NRKGLVGVGYGKAKEVPDAIRKA 61 Score = 20.8 bits (42), Expect(2) = 4.8 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = -1 Query: 170 AHVF*VMYPSAAVAISVTATRTTAMSCCRTPPMVELAPFLDM 45 AH V Y ++ + + + T ++ T P+VELA D+ Sbjct: 80 AHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDI 121
>MAAY3_SCHCO (P37934) Mating-type protein A-alpha Y3| Length = 926 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -1 Query: 299 WMSMLGMLLLATKLGDSSTGTIS*VLGTTRPTNGPARFA 183 W +++GM T GT S LG T TN P FA Sbjct: 860 WSALIGMTPSTTSQIHVLGGTYSCELGGTNTTNAPLNFA 898
>PHLPL_HUMAN (Q6ZVD8) PH domain leucine-rich repeat protein phosphatase-like (EC| 3.1.3.16) Length = 1323 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 77 PMVELAPFLDMTRLVLCAVPDWS 9 P+ L FLD++R +L VPDW+ Sbjct: 499 PVPSLLTFLDLSRNLLECVPDWA 521
>TLR13_MOUSE (Q6R5N8) Toll-like receptor 13 precursor| Length = 991 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 226 TYEMVPVLESPSFVASKSIPNMDIQGRR 309 TYE L+ P F+ KS+ ++++G+R Sbjct: 577 TYETTRTLQYPPFIKLKSLKQLNLEGQR 604 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,382,010 Number of Sequences: 219361 Number of extensions: 767840 Number of successful extensions: 2218 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2218 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
