ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LPXB_PROMM (Q7V5X6) Lipid-A-disaccharide synthase (EC 2.4.1.182) 30 2.1
2FA98B_MOUSE (Q80VD1) Protein FAM98B 28 6.1

>LPXB_PROMM (Q7V5X6) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 392

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 209 LGGPTTGGQGAWLLGGWECLGALGLWQS 126
           LGGP     GA LL     +GA+GLW++
Sbjct: 40  LGGPRMQASGAELLADTAPMGAIGLWEA 67



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>FA98B_MOUSE (Q80VD1) Protein FAM98B|
          Length = 429

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 214 GPWAGRRPAGKVRGSWAGGNAWG 146
           G   GR   G  RG W GG  WG
Sbjct: 339 GGGGGRGGGGGGRGGWGGGGGWG 361


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,777,723
Number of Sequences: 219361
Number of extensions: 200304
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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