ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast44b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105889.1| Zea mays PCO106909 mRNA sequence 50 0.004
2gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 46 0.057
3emb|AJ880678.2| Thialkalivibrio nitratireducens nir gene for eig... 44 0.22
4ref|XR_005003.1| PREDICTED: Mus musculus hypothetical protein LO... 42 0.88
5gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 0.88
6gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 0.88
7dbj|AB033997.2| Paenibacillus sp. A11-2 tdsA, tdsB, tdsC, orfD a... 42 0.88
8emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chr... 42 0.88
9ref|NM_179923.1| Arabidopsis thaliana ubiquitin-protein ligase/ ... 40 3.5
10gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome ... 40 3.5
11gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.5
12gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's... 40 3.5
13gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 40 3.5
14gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 40 3.5
15ref|NM_001001327.1| Mus musculus vitamin K epoxide reductase com... 40 3.5
16ref|XM_581499.2| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
17ref|XM_878761.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
18ref|XM_878727.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
19ref|XM_878697.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
20ref|XM_878663.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
21ref|XM_878602.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
22ref|XM_878568.1| PREDICTED: Bos taurus similar to CG9915-PA, tra... 40 3.5
23gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.5
24ref|NM_027121.3| Mus musculus vitamin K epoxide reductase comple... 40 3.5
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 3.5
26gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosom... 40 3.5
27gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 3.5
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.5
29gb|AC161345.4| Mus musculus chromosome 5, clone RP23-189N6, comp... 40 3.5
30gb|AY423046.1| Mus musculus VKORC1-like protein 1 (Vkorc1l1) mRN... 40 3.5
31gb|AC145512.33| Medicago truncatula clone mth2-19o18, complete s... 40 3.5
32gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosom... 40 3.5
33gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome ... 40 3.5
34gb|AC114008.5| Mus musculus BAC clone RP23-198A16 from chromosom... 40 3.5
35emb|CR734054.2|CNS0GT6D Tetraodon nigroviridis full-length cDNA 40 3.5
36emb|CR732700.2|CNS0GSAO Tetraodon nigroviridis full-length cDNA 40 3.5
37emb|CR729386.1|CNS0GPQO Tetraodon nigroviridis full-length cDNA 40 3.5
38emb|CR728177.2|CNS0GOT3 Tetraodon nigroviridis full-length cDNA 40 3.5
39emb|CR724365.1|CNS0GLV7 Tetraodon nigroviridis full-length cDNA 40 3.5
40emb|CR682128.2|CNS0FPA4 Tetraodon nigroviridis full-length cDNA 40 3.5
41gb|AC141865.27| Medicago truncatula clone mth2-7b19, complete se... 40 3.5
42gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone... 40 3.5
43gb|AC153002.15| Medicago truncatula clone mth2-95m8, complete se... 40 3.5
44gb|AC140067.14| Medicago truncatula clone mth2-25n14, complete s... 40 3.5
45gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 ... 40 3.5
46gb|AY122973.1| Arabidopsis thaliana putative RING zinc finger pr... 40 3.5
47gb|AY090933.1| Arabidopsis thaliana putative RING zinc finger pr... 40 3.5
48emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.5
49emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4,... 40 3.5
50emb|AJ630366.1| Canis familiaris MHC class II region on chromoso... 40 3.5
51gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, com... 40 3.5
52gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map... 40 3.5
53gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma... 40 3.5
54dbj|AK009497.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 3.5
55dbj|AK078942.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 3.5
56ref|NG_004117.1| Mus musculus vitamin K epoxide reductase comple... 40 3.5
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
59dbj|AK109154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
60emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 3.5
61gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Canc... 40 3.5
62gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone ... 40 3.5
63gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 3.5
64emb|Z66496.1|CEE04D5 Caenorhabditis elegans Cosmid E04D5, comple... 40 3.5
65gb|AC122871.4| Mus musculus BAC clone RP23-107P12 from 5, comple... 40 3.5
66emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chr... 40 3.5
67dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 3.5
68emb|AL713985.10| Mouse DNA sequence from clone RP23-104K14 on ch... 40 3.5
69emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chro... 40 3.5
70emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 40 3.5 
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence
          Length = 1420

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 229 ccggtcgtcggcccgcccaagggccacgtccctcgcccgcc 269
           |||||||||||||| |||||||||| |||| | ||||||||
Sbjct: 321 ccggtcgtcggccctcccaagggccccgtcacgcgcccgcc 361



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 226 ccgccggtcgtcggcccgcccaagggccacgtccctcgcccgcc 269
           |||||||||||||| || |||||||||| |||| | ||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggccccgtcacgcgcccgcc 415



 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 190 ccggtcgtcggcccgcccaagggcc 214
           |||||||||||||| ||||||||||
Sbjct: 321 ccggtcgtcggccctcccaagggcc 345



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 187 ccgccggtcgtcggcccgcccaagggcc 214
           |||||||||||||| || ||||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggcc 399
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 116    tcgcctgcgacgactgccacaag 138
              |||||||||||||||||||||||
Sbjct: 599353 tcgcctgcgacgactgccacaag 599375



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    cctgcgacgactgccacaag 138
              ||||||||||||||||||||
Sbjct: 616949 cctgcgacgactgccacaag 616968
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>emb|AJ880678.2| Thialkalivibrio nitratireducens nir gene for eight-heme nitrite
            reductase
          Length = 1662

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 116  tcgcctgcgacgactgccacaagcccaagg 145
            ||||||||| ||||||||||| ||||||||
Sbjct: 1214 tcgcctgcgccgactgccacatgcccaagg 1243
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>ref|XR_005003.1| PREDICTED: Mus musculus hypothetical protein LOC677075 (LOC677075),
           mRNA
          Length = 548

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 77  tcctcctcctcatcaccaccgccat 101
           |||||||||||||||||||| ||||
Sbjct: 322 tcctcctcctcatcaccaccaccat 298
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 88      atcaccaccgccatcgcggcg 108
               |||||||||||||||||||||
Sbjct: 3442192 atcaccaccgccatcgcggcg 3442212
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 95      ccgccatcgcggcgcccaccc 115
               |||||||||||||||||||||
Sbjct: 1246701 ccgccatcgcggcgcccaccc 1246721
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>dbj|AB033997.2| Paenibacillus sp. A11-2 tdsA, tdsB, tdsC, orfD and orfE genes,
            complete cds
          Length = 9595

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   gcagccatggtggcgagcacg 48
            |||||||||||||||||||||
Sbjct: 3326 gcagccatggtggcgagcacg 3306
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>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete
             sequence
          Length = 187252

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    tcctcctcctcatcaccaccgccat 101
             |||||||||||||||||||| ||||
Sbjct: 37894 tcctcctcctcatcaccaccaccat 37918
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>ref|NM_179923.1| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
           AT2G35910 mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcctcctcctcatcaccacc 96
           ||||||||||||||||||||
Sbjct: 424 tcctcctcctcatcaccacc 443
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>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence
          Length = 206456

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 75     cttcctcctcctcatcaccaccgccatc 102
              |||||||||||||| ||||||| |||||
Sbjct: 198679 cttcctcctcctcaccaccaccaccatc 198652
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      tcaccaccgccatcgcggcg 108
               ||||||||||||||||||||
Sbjct: 2885650 tcaccaccgccatcgcggcg 2885669
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>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 156078

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     cctgctgaccttcctcctcc 85
              ||||||||||||||||||||
Sbjct: 120615 cctgctgaccttcctcctcc 120596
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>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    cctcgcccgccggtcgtcggcccg 243
              |||||| |||||||||||||||||
Sbjct: 157635 cctcgctcgccggtcgtcggcccg 157658
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tcctcctcctcatcaccacc 96
             ||||||||||||||||||||
Sbjct: 84643 tcctcctcctcatcaccacc 84662
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>ref|NM_001001327.1| Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1
           (Vkorc1l1), transcript variant 2, mRNA
          Length = 1003

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 389 tgctgaacttcctcctcctcatca 412
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>ref|XM_581499.2| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 1
            (LOC538614), mRNA
          Length = 2957

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1704 cttcctcctcctcatcacca 1685
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>ref|XM_878761.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 9
            (LOC538614), mRNA
          Length = 3035

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1782 cttcctcctcctcatcacca 1763
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>ref|XM_878727.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 8
            (LOC538614), mRNA
          Length = 2843

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1590 cttcctcctcctcatcacca 1571
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>ref|XM_878697.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 7
           (LOC538614), mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  cttcctcctcctcatcacca 94
           ||||||||||||||||||||
Sbjct: 544 cttcctcctcctcatcacca 525
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>ref|XM_878663.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 6
           (LOC538614), mRNA
          Length = 1534

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  cttcctcctcctcatcacca 94
           ||||||||||||||||||||
Sbjct: 281 cttcctcctcctcatcacca 262
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>ref|XM_878602.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 4
            (LOC538614), mRNA
          Length = 3014

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1779 cttcctcctcctcatcacca 1760
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>ref|XM_878568.1| PREDICTED: Bos taurus similar to CG9915-PA, transcript variant 3
            (LOC538614), mRNA
          Length = 2962

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1779 cttcctcctcctcatcacca 1760
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tcaccaccgccatcgcggcg 108
             ||||||||||||||||||||
Sbjct: 43015 tcaccaccgccatcgcggcg 43034
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>ref|NM_027121.3| Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1
           (Vkorc1l1), transcript variant 1, mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 499 tgctgaacttcctcctcctcatca 522
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      tcctcatcaccaccgccatc 102
               ||||||||||||||||||||
Sbjct: 5527461 tcctcatcaccaccgccatc 5527442
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>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence
          Length = 232201

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 64    ctcctgctgaccttcctcctcctcatca 91
             ||||| ||||||||||||||||| ||||
Sbjct: 40906 ctccttctgaccttcctcctccttatca 40933
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>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tcctcctcatcaccaccgcc 99
              ||||||||||||||||||||
Sbjct: 187753 tcctcctcatcaccaccgcc 187734
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       tcctcctcctcatcaccacc 96
                ||||||||||||||||||||
Sbjct: 32432515 tcctcctcctcatcaccacc 32432534



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 220      cctcgcccgccggtcgtcggcccg 243
                |||||| |||||||||||||||||
Sbjct: 24478225 cctcgctcgccggtcgtcggcccg 24478202
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>gb|AC161345.4| Mus musculus chromosome 5, clone RP23-189N6, complete sequence
          Length = 177864

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    tgctgaccttcctcctcctcatca 91
             |||||| |||||||||||||||||
Sbjct: 65777 tgctgaacttcctcctcctcatca 65754
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>gb|AY423046.1| Mus musculus VKORC1-like protein 1 (Vkorc1l1) mRNA, complete cds
          Length = 1106

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 445 tgctgaacttcctcctcctcatca 468
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>gb|AC145512.33| Medicago truncatula clone mth2-19o18, complete sequence
          Length = 145524

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     accttcctcctcctcatcaccacc 96
              ||||||||||||||||||| ||||
Sbjct: 122440 accttcctcctcctcatcatcacc 122417
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>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence
          Length = 182582

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     cttcctcctcctcatcacca 94
              ||||||||||||||||||||
Sbjct: 153979 cttcctcctcctcatcacca 153960
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>gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome 19, complete
            sequence
          Length = 191402

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 3149 cttcctcctcctcatcacca 3130
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>gb|AC114008.5| Mus musculus BAC clone RP23-198A16 from chromosome 15, complete
             sequence
          Length = 202835

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    cgctcctgctgaccttcctcctcc 85
             ||||||||||||||| ||||||||
Sbjct: 28785 cgctcctgctgacctccctcctcc 28762
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>emb|CR734054.2|CNS0GT6D Tetraodon nigroviridis full-length cDNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1647 cttcctcctcctcatcacca 1666
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>emb|CR732700.2|CNS0GSAO Tetraodon nigroviridis full-length cDNA
          Length = 1831

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1637 cttcctcctcctcatcacca 1656
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>emb|CR729386.1|CNS0GPQO Tetraodon nigroviridis full-length cDNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1629 cttcctcctcctcatcacca 1648
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>emb|CR728177.2|CNS0GOT3 Tetraodon nigroviridis full-length cDNA
          Length = 1780

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1614 cttcctcctcctcatcacca 1633
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>emb|CR724365.1|CNS0GLV7 Tetraodon nigroviridis full-length cDNA
          Length = 1833

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   cttcctcctcctcatcacca 94
            ||||||||||||||||||||
Sbjct: 1640 cttcctcctcctcatcacca 1659
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>emb|CR682128.2|CNS0FPA4 Tetraodon nigroviridis full-length cDNA
          Length = 1033

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  cttcctcctcctcatcacca 94
           ||||||||||||||||||||
Sbjct: 856 cttcctcctcctcatcacca 875
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>gb|AC141865.27| Medicago truncatula clone mth2-7b19, complete sequence
          Length = 117380

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 73   accttcctcctcctcatcaccacc 96
            ||||||||||||||||||| ||||
Sbjct: 5128 accttcctcctcctcatcatcacc 5151
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>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17,
              complete sequence
          Length = 202430

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 75     cttcctcctcctcatcaccaccgccatc 102
              |||||||||||||| ||||||| |||||
Sbjct: 130855 cttcctcctcctcaccaccaccaccatc 130828
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>gb|AC153002.15| Medicago truncatula clone mth2-95m8, complete sequence
          Length = 112714

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    accttcctcctcctcatcaccacc 96
             ||||||||||||||||||| ||||
Sbjct: 29353 accttcctcctcctcatcatcacc 29330
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>gb|AC140067.14| Medicago truncatula clone mth2-25n14, complete sequence
          Length = 116196

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 73   accttcctcctcctcatcaccacc 96
            ||||||||||||||||||| ||||
Sbjct: 5126 accttcctcctcctcatcatcacc 5149
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>gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 BAC, RP22-325J22,
             Complete Sequence, complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    cttcctcctcctcatcacca 94
             ||||||||||||||||||||
Sbjct: 64504 cttcctcctcctcatcacca 64523
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>gb|AY122973.1| Arabidopsis thaliana putative RING zinc finger protein (At2g35910)
           mRNA, complete cds
          Length = 685

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcctcctcctcatcaccacc 96
           ||||||||||||||||||||
Sbjct: 221 tcctcctcctcatcaccacc 240
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>gb|AY090933.1| Arabidopsis thaliana putative RING zinc finger protein (At2g35910)
           mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcctcctcctcatcaccacc 96
           ||||||||||||||||||||
Sbjct: 424 tcctcctcctcatcaccacc 443
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      tcaccaccgccatcgcggcg 108
               ||||||||||||||||||||
Sbjct: 3888617 tcaccaccgccatcgcggcg 3888636
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>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
              complete sequence
          Length = 149134

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tcctcctcctcatcaccaccgcca 100
              |||||||||||||| |||||||||
Sbjct: 135684 tcctcctcctcatccccaccgcca 135661
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>emb|AJ630366.1| Canis familiaris MHC class II region on chromosome CFA12, partial
             sequence, BAC clone 21p19, containing partial col11a2
             gene, RXRB, SLC39A7, HSD17B8, RING1, VPS52, RPS18 and
             B3GALT4 genes, C12H6orf11 ORF, KE2, RAB2L, TAPBP, ZNF297
             and DAXX genes
          Length = 143626

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    tgaccttcctcctcctcatcacca 94
             ||||||||||||||||| ||||||
Sbjct: 93308 tgaccttcctcctcctcttcacca 93331
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>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence
          Length = 205604

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cctgctgaccttcctcctcc 85
              ||||||||||||||||||||
Sbjct: 136332 cctgctgaccttcctcctcc 136351
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>gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete
             sequence
          Length = 82652

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tcctcctcctcatcaccacc 96
             ||||||||||||||||||||
Sbjct: 41385 tcctcctcctcatcaccacc 41366
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>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tcctcctcctcatcaccacc 96
             ||||||||||||||||||||
Sbjct: 83370 tcctcctcctcatcaccacc 83389
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>dbj|AK009497.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310024K08 product:hypothetical protein,
           full insert sequence
          Length = 886

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 273 tgctgaacttcctcctcctcatca 296
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>dbj|AK078942.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
           library, clone:9130209J22 product:RIKEN cDNA 2310024K08
           gene, full insert sequence
          Length = 2805

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 336 tgctgaacttcctcctcctcatca 359
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>ref|NG_004117.1| Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1
           pseudogene 1 (LOC414359) on chromosome 15
          Length = 1371

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 68  tgctgaccttcctcctcctcatca 91
           |||||| |||||||||||||||||
Sbjct: 651 tgctgaacttcctcctcctcatca 674
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 77      tcctcctcctcatcaccaccgcca 100
               |||||||||||||| |||||||||
Sbjct: 6972813 tcctcctcctcatccccaccgcca 6972790
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       tcctcctcctcatcaccacc 96
                ||||||||||||||||||||
Sbjct: 32523025 tcctcctcctcatcaccacc 32523044



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 220      cctcgcccgccggtcgtcggcccg 243
                |||||| |||||||||||||||||
Sbjct: 24395694 cctcgctcgccggtcgtcggcccg 24395671
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>dbj|AK109154.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-G01, full
           insert sequence
          Length = 1192

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tcctcctcctcatcaccacc 96
           ||||||||||||||||||||
Sbjct: 233 tcctcctcctcatcaccacc 252
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>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     accttcctcctcctcatcaccacc 96
              ||||||||||||||| ||||||||
Sbjct: 180525 accttcctcctcctcttcaccacc 180502
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>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 233119

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    ctcctgctgaccttcctcctcctc 87
             ||||| ||||||||||||||||||
Sbjct: 49216 ctcctcctgaccttcctcctcctc 49193



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    ctcctgctgaccttcctcctcctc 87
             ||||| ||||||||||||||||||
Sbjct: 49195 ctcctcctgaccttcctcctcctc 49172
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>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete
             sequence
          Length = 183349

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gctgaccttcctcctcctca 88
             ||||||||||||||||||||
Sbjct: 66883 gctgaccttcctcctcctca 66864
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 96      cgccatcgcggcgcccaccc 115
               ||||||||||||||||||||
Sbjct: 1205299 cgccatcgcggcgcccaccc 1205280
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>emb|Z66496.1|CEE04D5 Caenorhabditis elegans Cosmid E04D5, complete sequence
          Length = 31536

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tcctcctcctcatcaccacc 96
             ||||||||||||||||||||
Sbjct: 17722 tcctcctcctcatcaccacc 17741
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>gb|AC122871.4| Mus musculus BAC clone RP23-107P12 from 5, complete sequence
          Length = 213939

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 64    ctcctgctgaccttcctcctcctcatca 91
             ||||| ||||||||||||||||| ||||
Sbjct: 11322 ctccttctgaccttcctcctccttatca 11295
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>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete
              sequence
          Length = 210893

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 75     cttcctcctcctcatcaccaccgccatc 102
              |||||||||||||| ||||||| |||||
Sbjct: 193302 cttcctcctcctcaccaccaccaccatc 193329
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>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
             complete sequence
          Length = 69411

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    cttcctcctcctcatcacca 94
             ||||||||||||||||||||
Sbjct: 12852 cttcctcctcctcatcacca 12833
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>emb|AL713985.10| Mouse DNA sequence from clone RP23-104K14 on chromosome 10, complete
             sequence
          Length = 199286

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    ctcctgctgaccttcctcctcctc 87
             ||||| ||||||||||||||||||
Sbjct: 47682 ctcctcctgaccttcctcctcctc 47705



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    ctcctgctgaccttcctcctcctc 87
             ||||| ||||||||||||||||||
Sbjct: 47655 ctcctcctgaccttcctcctcctc 47678



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    ctcctgctgaccttcctcctcctc 87
             ||||| ||||||||||||||||||
Sbjct: 47634 ctcctcctgaccttcctcctcctc 47657
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>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete
              sequence
          Length = 213625

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     gctgaccttcctcctcctca 88
              ||||||||||||||||||||
Sbjct: 106560 gctgaccttcctcctcctca 106541
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
              sequence
          Length = 236344

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 68     tgctgaccttcctcctcctcatca 91
              |||||| |||||||||||||||||
Sbjct: 153972 tgctgaacttcctcctcctcatca 153995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,396,953
Number of Sequences: 3902068
Number of extensions: 2396953
Number of successful extensions: 62305
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61682
Number of HSP's gapped (non-prelim): 623
length of query: 269
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 247
effective length of database: 17,147,199,772
effective search space: 4235358343684
effective search space used: 4235358343684
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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