ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44b03 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 138 bits (347), Expect = 4e-33 Identities = 66/104 (63%), Positives = 77/104 (74%) Frame = +3 Query: 45 GRAASFLLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIIS 224 GR + + L +L ++ LA PA A GKTGQ+ VFWGRNKNEG+L+E CDTG YT +IS Sbjct: 5 GRRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVIS 64 Query: 225 FLDVFGRGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGGFG 356 F VFG G Y DLSGHD+ +GADIKHCQSKNI VFLSIGG G Sbjct: 65 FYSVFGHGRYWGDLSGHDLRVIGADIKHCQSKNIFVFLSIGGAG 108
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 137 bits (344), Expect = 8e-33 Identities = 72/111 (64%), Positives = 84/111 (75%), Gaps = 2/111 (1%) Frame = +3 Query: 30 MALVRGRAASFLLLVTILCSATFLAVPA-AATGKTGQVAVFWGRNKNEGSLREACDTGTY 206 MA + R + LL + + +A FL A AA GKTGQV VFWGRNK EGSLREACD+G Y Sbjct: 1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMY 60 Query: 207 TIAIISFLDVFG-RGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGGFG 356 T+ +SFLDVFG G YHLDLSGHD+S+VGADIKHCQSK + V LSIGG+G Sbjct: 61 TMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGYG 111
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 117 bits (293), Expect = 7e-27 Identities = 63/113 (55%), Positives = 75/113 (66%) Frame = +3 Query: 24 LTMALVRGRAASFLLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGT 203 L AL+ AA+ LLL LA P AT +AV+WGR+K EGSLREACDTG Sbjct: 3 LVHALLPFAAAAALLL---------LAAPPPATADDPGLAVYWGRHKEEGSLREACDTGR 53 Query: 204 YTIAIISFLDVFGRGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGGFGNS 362 YT II+F + FG G Y LD+SGH ++AVGADIKHCQS+ I V LSIGG G + Sbjct: 54 YTTVIITFYNAFGHGRYSLDISGHPLAAVGADIKHCQSRGITVLLSIGGQGGA 106
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 70.5 bits (171), Expect = 9e-13 Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 7/84 (8%) Frame = +3 Query: 132 GQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYY-HLDLSGH------DVSAV 290 G ++V+WG+N NEGSL +AC+TG Y I+FL FG G L+L+GH + + Sbjct: 30 GGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVF 89 Query: 291 GADIKHCQSKNILVFLSIGGFGNS 362 IK CQSK+I V LS+GG S Sbjct: 90 SDQIKECQSKDIKVLLSLGGASGS 113
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 70.5 bits (171), Expect = 9e-13 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%) Frame = +3 Query: 78 ILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYY- 254 +L S + LA+ T G +A++WG+N NEG+L + C+TG Y+ I+FL+ FG G Sbjct: 10 LLISLSVLAL--LQTSYAGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTP 67 Query: 255 HLDLSGH------DVSAVGADIKHCQSKNILVFLSIGGFGNS 362 ++L+GH ++V I++CQ++ I V LSIGG S Sbjct: 68 EINLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGS 109
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 69.7 bits (169), Expect = 2e-12 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%) Frame = +3 Query: 48 RAASFLLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISF 227 + S L L+++L A+F + Q+ ++WG+N +EGSL + C++G Y I++F Sbjct: 4 KIVSVLFLISLLIFASF------ESSHGSQIVIYWGQNGDEGSLADTCNSGNYGTVILAF 57 Query: 228 LDVFGRGYY-HLDLSGH-----DVSAVGADIKHCQSKNILVFLSIGG 350 + FG G L+L+GH + +++ +DIK CQ I V LSIGG Sbjct: 58 VATFGNGQTPALNLAGHCDPATNCNSLSSDIKTCQQAGIKVLLSIGG 104
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 68.2 bits (165), Expect = 5e-12 Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 7/109 (6%) Frame = +3 Query: 57 SFLLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDV 236 SFLL +L FL A + G + ++WG+N NEGSL + C T Y I I+FL V Sbjct: 5 SFLLTALVL----FLR---ALKLEAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVV 57 Query: 237 FGRGYYH-LDLSGHDVSAVGA------DIKHCQSKNILVFLSIGGFGNS 362 FG G L+L+GH GA DI+ CQ++ I V LS+GG S Sbjct: 58 FGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGS 106
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 67.4 bits (163), Expect = 8e-12 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 7/82 (8%) Frame = +3 Query: 138 VAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYY-HLDLSGH-DVSAVGA----- 296 +AV+WG+N NEGSL++AC+T Y I+FL FG G ++L+GH D S G Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSP 85 Query: 297 DIKHCQSKNILVFLSIGGFGNS 362 +I+ CQ+K I V LS+GG S Sbjct: 86 EIQACQAKGIKVLLSLGGGAGS 107
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 66.6 bits (161), Expect = 1e-11 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%) Frame = +3 Query: 24 LTMALVRGRAASFLLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGT 203 +T +R FL ++ CS L+ P+ A+ G +A++WG+N NEG+L C TG Sbjct: 1 MTNMTLRKHVIYFLFFIS--CS---LSKPSDAS--RGGIAIYWGQNGNEGNLSATCATGR 53 Query: 204 YTIAIISFLDVFGRGYY-HLDLSGHDVSAV------GADIKHCQSKNILVFLSIGG 350 Y ++FL FG G L+L+GH A G+ +K CQS+ I V LS+GG Sbjct: 54 YAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGG 109
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 65.5 bits (158), Expect = 3e-11 Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Frame = +3 Query: 72 VTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGY 251 +T S FL + +A++WG+N NEGSL C TG Y I+FL FG G Sbjct: 6 ITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQ 65 Query: 252 YH-LDLSGH------DVSAVGADIKHCQSKNILVFLSIGGFGNS 362 L+L+GH + + +I C+S+N+ V LSIGG S Sbjct: 66 APVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGS 109
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 61.2 bits (147), Expect = 6e-10 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = +3 Query: 132 GQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYY-HLDLSGHDVSAVGA---- 296 G +A++WG+N NEG+L + C T Y+ I+FL+ FG G ++L+GH A G Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 86 Query: 297 --DIKHCQSKNILVFLSIGG 350 I+ CQ + I V LS+GG Sbjct: 87 SNGIRSCQIQGIKVMLSLGG 106
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 60.8 bits (146), Expect = 8e-10 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 7/82 (8%) Frame = +3 Query: 126 KTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYY-HLDLSGHDVSAVGA-- 296 K G + V+WG++ EG L + C++G Y I I+FL FG L+L+GH + G Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQ 82 Query: 297 ----DIKHCQSKNILVFLSIGG 350 I+HCQS I + LSIGG Sbjct: 83 QLTKSIRHCQSIGIKIMLSIGG 104
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 58.2 bits (139), Expect = 5e-09 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%) Frame = +3 Query: 63 LLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFG 242 L+L+ ++ +F + A T ++AV+WG+ + +G LR+ C T Y I ISFLD FG Sbjct: 8 LILMVVIWIMSFWTLSLADISST-EIAVYWGQ-REDGLLRDTCKTNNYKIVFISFLDKFG 65 Query: 243 RGYYHLDLS---------GHDVSAVGADIKHCQSKNILVFLSIGG 350 +L G+ S + + IK CQ + VFL++GG Sbjct: 66 CEIRKPELELEGVCGPSVGNPCSFLESQIKECQRMGVKVFLALGG 110
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 50.4 bits (119), Expect = 1e-06 Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 21/108 (19%) Frame = +3 Query: 90 ATFLA---VPAAATGKTGQVAVFWGRNKNEGSLREA-----CDTGTYTIAIISFLDVFG- 242 + FLA V AA + V +WG+N GS +A C++G ++SFL VF Sbjct: 12 SAFLASTGVQAAWSSNGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNV 71 Query: 243 ------------RGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGG 350 G Y + AVGADIK CQ K + V LS+GG Sbjct: 72 GGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGG 119
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 50.1 bits (118), Expect = 1e-06 Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 21/108 (19%) Frame = +3 Query: 90 ATFLA---VPAAATGKTGQVAVFWGRNKNEGSLREA-----CDTGTYTIAIISFLDVFG- 242 + FLA V AA + V +WG+N GS +A C++G ++SFL VF Sbjct: 12 SAFLASTGVQAAWSSHGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNV 71 Query: 243 ------------RGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGG 350 G Y + AVGADIK CQ K + V LS+GG Sbjct: 72 GGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGG 119
>CHLY_PARTH (P23473) Bifunctional chitinase/lysozyme [Includes: Chitinase (EC| 3.2.1.14); Lysozyme (EC 3.2.1.17)] (Fragment) Length = 47 Score = 50.1 bits (118), Expect = 1e-06 Identities = 19/39 (48%), Positives = 29/39 (74%) Frame = +3 Query: 132 GQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRG 248 G +A++WG+N NEG+L + C+TG Y+ I+FL+ FG G Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNG 39
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 47.8 bits (112), Expect = 7e-06 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 19/110 (17%) Frame = +3 Query: 90 ATFLAVPAAATGKTG-QVAVFWGRNK-----NEGSLREACDTGTYTIAIISFLDVFGRGY 251 A F+ AA G V +WG+N +GSL C +G + I+SFL+ F G Sbjct: 12 AAFITSTLAAYSSNGVNVMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGG 71 Query: 252 Y-HLDLSGH------------DVSAVGADIKHCQSKNILVFLSIGGFGNS 362 ++L+ VG+DIK CQS + V LS+GG S Sbjct: 72 LPEINLASACEQTFFPNTNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGS 121
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 43.1 bits (100), Expect = 2e-04 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 11/98 (11%) Frame = +3 Query: 90 ATFLAVPAAATGKTGQVAVFWGRNKNEGSLREA--CDTGTYTIAIISFLDVFGR--GYYH 257 A + +A + QVA++WG+N G R A C I ++SFL++F Sbjct: 9 AAAVVASSALASASNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLNVNF 68 Query: 258 LDLSGHDV-------SAVGADIKHCQSKNILVFLSIGG 350 + G+ S +GADIK CQS V LS+GG Sbjct: 69 ANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGG 106
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 43.1 bits (100), Expect = 2e-04 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 19/118 (16%) Frame = +3 Query: 66 LLVTILCSATFLAVPAAATGKTGQ--VAVFWGRNK--NEGSLREACDTGTYTIAIISFL- 230 LL IL FL +P A ++ +AV+WG+N + SL C++ I ++SFL Sbjct: 3 LLYIILLFTQFLLLPTDAFDRSANTNIAVYWGQNSAGTQESLATYCESSDADIFLLSFLN 62 Query: 231 --------------DVFGRGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGGFGNS 362 D F G H + + DI+ CQS V LS+GG S Sbjct: 63 QFPTLGLNFANACSDTFSDGLLHC-------TQIAEDIETCQSLGKKVLLSLGGASGS 113
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 42.7 bits (99), Expect = 2e-04 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%) Frame = +3 Query: 78 ILCSATFLAVPAAATGKTGQVAVFWGRNK--NEGSLREACDTGTYTIAIISFLDVFGR-- 245 IL LA+ A+ +A +WG+N ++ +L + C + +I I+SFLD F Sbjct: 2 ILNLIILLAISIVASASN--IAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPNLS 59 Query: 246 --------GYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGG 350 G + L+ S +G+DIK CQ + + LS+GG Sbjct: 60 LNFANQCSGTFSSGLA--HCSQIGSDIKSCQQQGKTILLSLGG 100
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 41.2 bits (95), Expect = 6e-04 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 15/115 (13%) Frame = +3 Query: 63 LLLVTILCSATFLAVPAAATG--KTGQVAVFWGRNKNEGSLREA--CDTGTYTIAIISFL 230 L L+TI L +PA A VAV+WG+N R + CD+ I I+SF+ Sbjct: 2 LYLLTIFS----LLLPALAINARSNSNVAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFM 57 Query: 231 DVFG-----------RGYYHLDLSGHDVSAVGADIKHCQSKNILVFLSIGGFGNS 362 F G Y + + DIK+CQ+K + LS+GG S Sbjct: 58 HQFPSPIQLNFANACEGTYTAN-GILQCQTIAEDIKYCQNKGKTILLSLGGAAGS 111
>TILS_ERWCT (Q6D8C5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 440 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = -2 Query: 193 SQASRRDPSFL---FLPQNTATWPVFPVAAAGTARKVAEQ 83 +Q R D +FL LP+ T WP FP A A +A AEQ Sbjct: 188 NQDERFDRNFLRRQILPRLTQRWPHFPSAVARSAELCAEQ 227
>CH38_DROME (P07183) Chorion protein S38| Length = 306 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 221 NDGYGVRASVAGLAEGPLVLVPTPEHGHLACLPRGRG 111 N G A++AG EGP P P H H + P G G Sbjct: 265 NQGLSALANIAGEREGP--YGPAPSHQHYSAGPAGHG 299
>LDH_DEIRA (P50933) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH)| Length = 304 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 8/45 (17%) Frame = -1 Query: 212 YGVRASVAGLAEGPL--------VLVPTPEHGHLACLPRGRGRDG 102 YG+ A++A + E L V PTPE+G LPR GR G Sbjct: 227 YGIGAALARITEAVLRDRRAVLTVSAPTPEYGVSLSLPRVVGRQG 271
>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) (NFATmac) Length = 822 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 7/44 (15%) Frame = +2 Query: 44 RSGSLLPTPRDYPLLRNLPCRP------GRGH-GEDRPGGRVLG 154 RS + P P P L +L C P G GH G RP G VLG Sbjct: 744 RSAVMSPPPSASPKLHDLSCAPYSKGMAGPGHLGLQRPAGGVLG 787
>CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5)| (Carboxypeptidase YSCY) Length = 523 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/64 (25%), Positives = 27/64 (42%) Frame = +3 Query: 90 ATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYYHLDLS 269 + F PAA Q+ + KN +R+ CD G+ + F+D + + D Sbjct: 332 SAFTCAPAAIYCNNAQMGPYQRTGKNVYDIRKECDGGSLCYKDLEFIDTYLNQKFVQDAL 391 Query: 270 GHDV 281 G +V Sbjct: 392 GAEV 395
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 10/62 (16%) Frame = +2 Query: 32 GARTRSGSLLP----------TPRDYPLLRNLPCRPGRGHGEDRPGGRVLG*EQERGVPP 181 G R GS+ P TPR P P RPG G RPGG G G P Sbjct: 242 GPRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGRPGGAPGAGRPGGGGGGYRGGGGAPG 301 Query: 182 RG 187 G Sbjct: 302 AG 303
>Y705_DEIRA (Q9RWG3) Hypothetical protein DR0705| Length = 308 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = -2 Query: 232 SRKEMMAMVYVPVSQASRRDPSFLFLPQNTATWPVFPVAAAGTARKVAEQRIVTRSRK-- 59 +R EM+A V + A ++P F+ +PQN A P AA E+ V + + Sbjct: 186 ARAEMVAWVCKIAAHARAQNPQFVIIPQNAAELIRDPGYAACVDASGNEETYVYAANRPT 245 Query: 58 EAARPR 41 EAAR R Sbjct: 246 EAARQR 251
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 231 DVFGRGYYHLDLSGHDVSAVGADIKHCQSKN 323 D YYHL + H +AVGA++ H S+N Sbjct: 181 DTLVASYYHL-VKNHSGTAVGAELSHSMSRN 210
>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein| Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2; Selenoprotein Se-P1] Length = 385 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 164 ERGVPPRGLRHWHVHHSH 217 E +PP GL H H HH H Sbjct: 235 ETSLPPSGLHHHHHHHKH 252
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = +3 Query: 96 FLAVPAAATGKTGQVAVFWGRNKN---EGSL 179 F+ VPAA +V FWG+ KN EGSL Sbjct: 1044 FIPVPAAPISNKLKVLKFWGKKKNSSGEGSL 1074
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -1 Query: 131 CLPRGRGRDGKEGCGAEDSHEE*EGGCPTAYERHC 27 CL GR DG + CG D +E + PTA+ HC Sbjct: 3709 CLWIGRQCDGTDNCG--DGTDEEDCEPPTAHTTHC 3741
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 20 RSNNGARTRSGSLLPTPRDYPLLRNLPCRPGRGHGEDRPGG 142 R G R + PTP P P + GRG G+ PGG Sbjct: 265 RQGGGRRPSPAMMPPTPGQMPA--KAPGKGGRGGGQGGPGG 303
>EFNA2_HUMAN (O43921) Ephrin-A2 precursor (EPH-related receptor tyrosine kinase| ligand 6) (LERK-6) (HEK7-ligand) (HEK7-L) Length = 213 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 63 LLLVTILCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYT--IAIISFLDV 236 LLL+ L F AA + + AV+W R+ D G YT ++I +LD+ Sbjct: 12 LLLLLPLPPPPFARAEDAARANSDRYAVYWNRSNPRFHAGAGDDGGGYTVEVSINDYLDI 71 Query: 237 F 239 + Sbjct: 72 Y 72
>LEUD_CAMJR (Q5HS79) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 200 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = +3 Query: 159 NKNEGSLREAC-----DTGTYTIAIISFLDVF-----GRGYYHLDLSGHDVSAVGADIKH 308 N GS RE D G I SF D+F G G ++L+ +V + ++K Sbjct: 78 NFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKK 137 Query: 309 CQSKNILVFL 338 Q KNI + L Sbjct: 138 SQDKNIEISL 147
>LEUD_CAMJE (Q9PLW2) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 200 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = +3 Query: 159 NKNEGSLREAC-----DTGTYTIAIISFLDVF-----GRGYYHLDLSGHDVSAVGADIKH 308 N GS RE D G I SF D+F G G ++L+ +V + ++K Sbjct: 78 NFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKK 137 Query: 309 CQSKNILVFL 338 Q KNI + L Sbjct: 138 SQDKNIEISL 147
>USPE_PHOLL (P60005) Universal stress protein E| Length = 314 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 8 KKTHRSNNGARTRSGSLLPTPRDYPLLRNLPC 103 K TH+ + + GSL+ TP D+ LLR PC Sbjct: 114 KMTHKHD-----KLGSLIFTPLDWQLLRKCPC 140
>DOCK9_HUMAN (Q9BZ29) Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide| exchange factor zizimin 1) Length = 2069 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -1 Query: 158 PTPEHGHLACLPRGRGRDGKEGCGA 84 P H H ACL R RG ++GC A Sbjct: 1660 PLLPHSHSACLRRSRGGVFRQGCTA 1684
>HUNB_BOMMO (O18326) Protein hunchback (Fragment)| Length = 385 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -1 Query: 113 GRDGKEGCGAEDSHEE*EGGCPTAYERHC*IDEFSC 6 G DG+EG G ED +E G A H + F C Sbjct: 196 GDDGREGSGLEDDFDEEPGLRVPAVNSHGKVKTFKC 231
>DXS_CAPAN (O78328) Probable 1-deoxy-D-xylulose-5-phosphate synthase,| chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) Length = 719 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = +3 Query: 144 VFWGRNKNEGSLREACDTGTYTIAIISFLDVFGRGYYHLDLSGHDVSAVGADIKHCQSKN 323 + GR + +LR+ +T S D FG G+ +S AVG D+K ++ N Sbjct: 152 ILTGRREKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKG-RNNN 210 Query: 324 ILVFLSIG 347 ++ + G Sbjct: 211 VIAVIGDG 218
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +2 Query: 77 YPLLRNLPCRPGRGHGEDRPGGRVLG*EQERGVPPRGLRHWHVHH 211 YP L PGR D+ GG G +PPRG WH H Sbjct: 1128 YPYAERLGPPPGRYWSVDKLGGWRAG--SWDYLPPRGGPAWHCRH 1170
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +2 Query: 77 YPLLRNLPCRPGRGHGEDRPGGRVLG*EQERGVPPRGLRHWHVHH 211 YP L PGR D+ GG G +PPRG WH H Sbjct: 1128 YPYAERLGPPPGRYWSVDKLGGWRAG--SWDYLPPRGGPAWHCRH 1170
>LRP4_HUMAN (O75096) Low-density lipoprotein receptor-related protein 4| precursor (Multiple epidermal growth factor-like domains 7) Length = 1950 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 107 DGKEGCGAEDSHEE*EGGCPTAYERHC*IDEFSCW 3 DG++ C A++S EE C C +D+F CW Sbjct: 335 DGEDDC-ADNSDEE---NCENTGSPQCALDQFLCW 365
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = -1 Query: 131 CLPRGRGRDGKEGCGAEDSHEE*EGGCPTAYERHC*IDEFSC 6 C+P+ DG CG+ + T R C +D+FSC Sbjct: 898 CIPKRWLCDGANDCGSNEDESN-----QTCTARTCQVDQFSC 934 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,365,485 Number of Sequences: 219361 Number of extensions: 915790 Number of successful extensions: 3691 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3620 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
