ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44b02 |
|---|---|
| Clone Library Name | barley_pub |
>TILS_BRAJA (Q9XBG6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 361 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 8/73 (10%) Frame = +1 Query: 247 DARSLGRCSAVSRRFNALVPLVDDACLRIDRVIAADDAPAGPRQRGVISGLLKT------ 408 DARSL R +A R NA V ++ D R R+ DDAP GP R +G T Sbjct: 218 DARSLARLAARLARANAAVEVLTDGAERFLRLRDRDDAPHGPDMRSFEAGAFATLPEEVR 277 Query: 409 --VLLAVLKPFGH 441 +LL + GH Sbjct: 278 LRMLLRAINALGH 290
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 37.7 bits (86), Expect = 0.015 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = -3 Query: 371 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW 192 GP SS++ + S +S++ S +K T + RP+ +S+S S+S S + S Sbjct: 1214 GPQSHSSSSSSSSSSSSSSASKSFSTVKPPMTRKPRPARSSSSSSSSDSSSSSSSSSSSS 1273 Query: 191 SSPCARSRSSANTRCLD 141 SS + S SS+ ++ L+ Sbjct: 1274 SSSSSSSSSSSESKSLE 1290
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 37.7 bits (86), Expect = 0.015 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -3 Query: 359 ASSAAMTRSMRRQASSTSGT------SALKRRETAEQRPSERASASLLKMRSTSESGTLS 198 ++S +T S + Q + T G S+ RR +QR S S + RS S+S T + Sbjct: 229 STSRQLTTSKQPQQTETRGRRYGRRPSSKSRRSQTQQRRSRSRHRSRSRSRSRSKSQTHT 288 Query: 197 KWSSPCARSRSSANTRCL 144 WS+ +RS S TR L Sbjct: 289 TWSTTRSRSTSVGKTRAL 306
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 36.2 bits (82), Expect = 0.044 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 7/114 (6%) Frame = -3 Query: 473 ARGGGLAPASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGT-- 300 A A AS S+A S + E T + +++ A T++ S+T+ Sbjct: 372 AESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQS 431 Query: 299 -----SALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSSANT 153 SA R ETA +R + ASA L+ ST++ G + S+ + S + A T Sbjct: 432 KSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAAT 485 Score = 32.0 bits (71), Expect = 0.83 Identities = 24/73 (32%), Positives = 34/73 (46%) Frame = -3 Query: 371 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW 192 G A AS+ A +S ASS S T+ K E EQ + SAS K T+ + + Sbjct: 314 GQASASATAAGKSAESAASSAS-TATTKAGEATEQASAAARSASAAKTSETNAKASETSA 372 Query: 191 SSPCARSRSSANT 153 S + SSA++ Sbjct: 373 ESSKTAAASSASS 385 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -3 Query: 365 AGASSAAMTRSMRRQASSTSGTSALKRRE----TAEQRPSERASASLLKMRSTSESGTLS 198 A ++SA S + ASS++GT++ K E A S+ A+A+ TSE+ + Sbjct: 154 AASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASA 213 Query: 197 KWSSPCARSRSSANTR 150 S A S S+A T+ Sbjct: 214 SLQS-AATSASTATTK 228
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 34.7 bits (78), Expect = 0.13 Identities = 22/57 (38%), Positives = 33/57 (57%) Frame = -3 Query: 356 SSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS 186 SS++ + S QAS+TS +S +A+ SE +S+S S+SES + S WSS Sbjct: 168 SSSSSSSSASNQASATSSSSV-----SADGSESESSSSSSSSSSSSSESSSSSSWSS 219
>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)| Length = 867 Score = 32.7 bits (73), Expect = 0.49 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = -3 Query: 437 PKGLSTARSTVL-RRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRP 261 P GLS+ S+ L R+P+ + S+A++ + +SSTSG S KR+ ++ P Sbjct: 635 PSGLSSVPSSPLSRKPQKWKPSKSIRPKESSALSTNCHNASSSTSGGSGKKRKNSS---P 691 Query: 260 SERASASLLKMRSTSESGTLSKWSSPC 180 S+S S+S S +++ + C Sbjct: 692 LLVPSSSSSSSSSSSSSHSVNSFRKNC 718
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 32.0 bits (71), Expect = 0.83 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Frame = -3 Query: 458 LAPASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRE 279 L+ S P ST+ S+ T + +S++ + S SSTS +S+L Sbjct: 186 LSSTSTSPSSTSTSPSSTSTSSSST----STSSSSTSTSSSSTSTSPSSTSTSSSLTSTS 241 Query: 278 TAEQRPSERASASLLKMRSTSESGTLSKWS----SPCARSRSSANT 153 ++ S+ ++++ STS S T + S SP ++S S+++T Sbjct: 242 SSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASST 287 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = -3 Query: 425 STARSTVLRRPEMTP---RWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSE 255 ST ST P T P+ S++ + S ++STS +S + PS Sbjct: 171 STLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSS 230 Query: 254 RASASLLKMRSTSESGTLSKWSSPCARSRSSANT 153 +++S L STS S T + SS S S++ + Sbjct: 231 TSTSSSLT--STSSSSTSTSQSSTSTSSSSTSTS 262
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) (p135) Length = 1278 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -3 Query: 437 PKGLSTARSTVLRRPEMT-PRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRP 261 PK TAR T RRP+ T P G AGASS S+ S+++G + T Q P Sbjct: 136 PKKAPTARKTTTRRPKPTRPASTGVAGASS-----SLGPSGSASAGELSSSEPSTPAQTP 190
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 31.6 bits (70), Expect = 1.1 Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Frame = -3 Query: 455 APASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRET 276 APA + P+ S R+T TPR P+ S R M Q +T +S L Sbjct: 276 APAQEAPQTSSLPRNTQRDTQRSTPRTSSPSRVSQRDTPRVMSTQRKNTPLSSPL----- 330 Query: 275 AEQRPSERASASLLKMRSTSESGTLSKWSSPCAR--------SRSSANTRCL 144 RA+ LK+ S E GT SPC + R S+ T C+ Sbjct: 331 -------RATPETLKI-SAPEDGT-HVTPSPCVQDSSLNRTSQRDSSRTPCI 373
>VE2_HPV17 (P36785) Regulatory protein E2| Length = 452 Score = 30.8 bits (68), Expect = 1.9 Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 14/116 (12%) Frame = -3 Query: 455 APASQWPKGLS-TARSTVLRRPEMTPRWRGPAGASSAAMTRSMR------------RQAS 315 A S +GLS T+ ST + R+R A + +A TR R RQA Sbjct: 217 ASRSSPARGLSATSVSTRTTQRTSPRRYRRKASSPTATTTRHKRQDIRRSRSTSRGRQAI 276 Query: 314 STSGTSALKRRETAEQRPSERASASLLKMRSTSESG-TLSKWSSPCARSRSSANTR 150 S G +RRE + R S R S + R S G T S +RSRS + +R Sbjct: 277 SRGGERRQRRRERSYSRDSSR---SPNRGRGGSSGGPTTRSQSRSLSRSRSRSRSR 329
>MNR2_YEAST (P35724) Manganese resistance protein MNR2| Length = 969 Score = 30.8 bits (68), Expect = 1.9 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Frame = -3 Query: 446 SQWPKGLSTARSTVLRRPEM---TPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRET 276 SQ +G + STV +P M TP ++ PAG + RS+ S + S LKRR++ Sbjct: 106 SQPREGPQSVSSTVQPQPIMKFSTPSYKKPAGLRPSDQNRSLVSDLSPSELESWLKRRKS 165 Query: 275 A------EQRPSERASAS 240 E P++R ++ Sbjct: 166 VHKSFVDENSPTDRRQSN 183
>CCNL2_RAT (Q5I0H5) Cyclin-L2| Length = 520 Score = 30.4 bits (67), Expect = 2.4 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Frame = -3 Query: 473 ARGGGLAPASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTS---- 306 AR GL P P GL +A + P+ G SS ++ +R+ Sbjct: 308 ARAKGLLPPGSAP-GLDSATAGFSPAPKPESPKEGKGSKSSPLSVKNAKRKMEGPKKAKG 366 Query: 305 ---------GTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSSANT 153 G + + + EQ S S S R S+SG+ S S +RSRS +++ Sbjct: 367 DSPVNGLLKGQESRSQSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDS 426
>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)| Length = 373 Score = 30.4 bits (67), Expect = 2.4 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = -3 Query: 359 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW-SSP 183 +SSA + S A+STS TS ++ S +++S K S+ +S T+S SSP Sbjct: 109 SSSAQSSHSSTDDATSTSSTST---TSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTDSSP 165 Query: 182 CARSRSSANT 153 + S S+++T Sbjct: 166 TSSSLSASST 175
>DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1) Length = 663 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = -3 Query: 371 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRS 222 G + ++S++ + S +SS+S +S L+RR+ P E A+ + K RS Sbjct: 576 GSSSSNSSSSSSSSSSSSSSSSSSSDLRRRDVRTGWPEEPAADAQFKRRS 625
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 30.4 bits (67), Expect = 2.4 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Frame = -3 Query: 467 GGGLAPASQWPK-------GLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASST 309 GGG + W + L RST+ + MTP + S A+ + QA+ST Sbjct: 213 GGGRSAGQHWARLRGESGLSLERHRSTLTQASSMTPHSGPRSTTSQASPAQRDTAQAAST 272 Query: 308 SGTSALKRRETAEQRPSERASASLLKM-RSTSESGTLSKWSS 186 QR + RAS++ ++ R++S S+ SS Sbjct: 273 REIPRASSPHRITQRDTSRASSTQQEISRASSTQQETSRASS 314
>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1798 Score = 30.4 bits (67), Expect = 2.4 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Frame = -3 Query: 395 PEMTPRWRGPA----GASSAAMTRSMRRQASST--SGTSALKRRETAEQRPSERASASLL 234 P M R RG + GA++ A++ R+A SG S KR + + ASA+ L Sbjct: 997 PAMETRGRGTSQLAEGATAKAISDLAVRRARHRLLSGDSTEKRTARPVNKVIKSASATAL 1056 Query: 233 KMRSTSESGTLSKWSSPCARSRSSANTRCLD 141 + SE T S +SP + S+N D Sbjct: 1057 SLLIPSEHHTCSPLASPMSPHSQSSNPSSRD 1087
>PSK5_ORYSA (O81277) Phytosulfokines 5 precursor (Secretory protein SH27A)| [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] Length = 102 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +1 Query: 361 PAGPRQRGVISGLLKTVLLAVLKPFGHCDAGARPPP 468 P G R ++ L +LL VL F HC + ARP P Sbjct: 3 PTGRRSSPPVAAALALLLLLVLFFFSHCASAARPLP 38
>YSR2_CAEEL (Q09950) Hypothetical protein F59B10.2| Length = 482 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = -3 Query: 374 RGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSK 195 R PA A +A + + + + A K++E P+E + S STSES T S+ Sbjct: 175 RKPAPARTAPIVVEKKIEKPAVKEQKARKKKEKTPT-PTESSFESSSDSSSTSESSTSSE 233 Query: 194 WSSPCARSRSSANT 153 SS + S S + + Sbjct: 234 SSSSASESESESKS 247
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner| cell wall protein) Length = 238 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/70 (31%), Positives = 40/70 (57%) Frame = -3 Query: 359 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPC 180 +SSA+ + S +ASS+ T A ++ + S +++S K S+S + + SK SS Sbjct: 94 SSSASSSASSSSKASSS--TKASSSSASSSTKASSSSASSSTKASSSSAAPSSSKASSTE 151 Query: 179 ARSRSSANTR 150 + S SS++T+ Sbjct: 152 SSSSSSSSTK 161
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 30.0 bits (66), Expect = 3.2 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 2/109 (1%) Frame = -3 Query: 470 RGGGLAPASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTS--GTS 297 RGGG + + + S + S R R R S +R R + S + G Sbjct: 389 RGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGY 448 Query: 296 ALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSSANTR 150 +RR + +R +R S S + S WS +RSRS +R Sbjct: 449 GPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSR 497
>SORC2_MOUSE (Q9EPR5) VPS10 domain-containing receptor SorCS2 precursor| Length = 1159 Score = 30.0 bits (66), Expect = 3.2 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 4/110 (3%) Frame = +1 Query: 118 GILQSRMQSRHRVFAEDLLLAQGEDHFDSVPDSLVLLIFNKLADARSL---GRCSAVSRR 288 G++ +R+ S+ E+LL+ + ++ D VLL + RSL R +AV + Sbjct: 985 GLVVTRLLSKETSIPEELLVTVVKPGLPTIADLYVLLPLPRPTRKRSLTSDKRLAAVQQA 1044 Query: 289 FNA-LVPLVDDACLRIDRVIAADDAPAGPRQRGVISGLLKTVLLAVLKPF 435 N+ + + LRI ++ D GP++ G G V+L V+ F Sbjct: 1045 LNSHRISFILRGGLRI--LVELRDTDTGPQRPGGSGGYWAVVVLFVIGLF 1092
>ESC2_ASHGO (Q756K3) Protein ESC2 (Establishes silent chromatin protein 2)| Length = 407 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Frame = -3 Query: 425 STARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSA-----LKRRETAEQRP 261 S A+ L WR A SS + + + S+SG S KR+ T EQ+P Sbjct: 67 SEAKGDTLATKRGRSSWRRGASESSRSSSLGSSSPSDSSSGRSLSPVRPAKRKRTDEQQP 126 Query: 260 SERASASLLKMRSTSE 213 A+ L +M E Sbjct: 127 ESEANRFLAEMERDIE 142
>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1281 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -3 Query: 437 PKGLSTARSTVLRRPEMT-PRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRP 261 PK TAR T RRP+ T P G AG SS S+ S+++G + T Q P Sbjct: 136 PKKAPTARKTTTRRPKPTRPASTGVAGPSS-----SLGPSGSASAGELSSSEPSTPAQTP 190
>VE2_HPV38 (Q80910) Regulatory protein E2| Length = 441 Score = 29.6 bits (65), Expect = 4.1 Identities = 30/96 (31%), Positives = 44/96 (45%) Frame = -3 Query: 437 PKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPS 258 P G ST ++ PE + S A R R+ASS S TS +R+ E + Sbjct: 204 PVGDSTDSASRAALPEPSTSVSPERPPSQTA--RRYGRKASSPSTTSRRQRKGQRETTGT 261 Query: 257 ERASASLLKMRSTSESGTLSKWSSPCARSRSSANTR 150 +R S + RST+ G ++ SS +R S + TR Sbjct: 262 QRRRKSRSRSRSTNRGGRDTRRSS--SRGSSVSPTR 295
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor| Length = 1783 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 374 RGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMR-STSESGT 204 +GPA A R RRQA++++ T+ +T +P+ A + + R S +++G+ Sbjct: 109 QGPAAAGGRGQARHGRRQAAASAATTVSAAPQTGATKPAATAKTTPQRPRGSDADAGS 166
>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 290 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTRCLD 141 KRR E+R ERA + RS S S S+ S C+RSR +R D Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRD 321
>VE2_HPV48 (Q80923) Regulatory protein E2| Length = 396 Score = 29.6 bits (65), Expect = 4.1 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Frame = -3 Query: 452 PASQWPKGLSTARSTVL--RRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGT--SALKR 285 P+S+ GLST+ S+ RRP ++ + SS + R RR+ SGT + +R Sbjct: 213 PSSESRVGLSTSSSSESPRRRPSISENSNTESPTSSTSRLRERRRREPRESGTTDTTPRR 272 Query: 284 RETAEQRPSERA-SASLLKMRSTS 216 R T + S+ A + S + RST+ Sbjct: 273 RGTKRKLGSDSAPTPSEVGSRSTT 296
>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)| Length = 809 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/81 (23%), Positives = 38/81 (46%) Frame = -3 Query: 395 PEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTS 216 P +P + P+G ++++ T + SST+ T+ T S + + + ST Sbjct: 139 PSSSPHSQAPSGHTASSSTNT-----SSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193 Query: 215 ESGTLSKWSSPCARSRSSANT 153 +SGT + ++ RS+ +T Sbjct: 194 QSGTTAATNTATTSHRSTNST 214
>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1280 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -3 Query: 437 PKGLSTARSTVLRRPEMT-PRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRP 261 PK TAR T RRP+ T P G AG SS S+ S+++G + T Q P Sbjct: 136 PKKAPTARKTTTRRPKPTRPASTGVAGPSS-----SLGPSGSASAGELSSSEPSTPAQTP 190
>VE2_HPV22 (P50768) Regulatory protein E2| Length = 436 Score = 29.3 bits (64), Expect = 5.4 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Frame = -3 Query: 461 GLAPASQWPKGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRR 282 G+A + P+ ST+ S R ++T R+ A + + R +R+ T +R+ Sbjct: 206 GVASQNSAPEPASTSDSPQ-RSSQVTHRYGRKASSPTITTIRRQKRRERQRQETPTRRRK 264 Query: 281 ETAEQRPSERASASLLKMRSTSESGTLSK-----WSSPCARSRSSANTRCLDCI 135 + R +E+ + + ES + P RSRS + +R + + Sbjct: 265 TRSRSRSTEQRGGRATRRSLSRESAESPRRGGRGGGGPLTRSRSRSRSRTRESV 318
>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)| Length = 892 Score = 29.3 bits (64), Expect = 5.4 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = -3 Query: 437 PKGLSTARSTVL-RRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRP 261 P GLS+ S+ + R+P+ + S+ + + + +SSTSG S KR+ ++ Sbjct: 656 PSGLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGKKRKNSSPLLV 715 Query: 260 SERASASLLKMRSTSESGTLSKWSSPC 180 +S+S S+S S ++ + C Sbjct: 716 HSSSSSS----SSSSSSHSMESFRKNC 738
>ISPE_ANADE (Q2IM67) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 313 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = -3 Query: 473 ARGGGLAPASQWPKGLSTAR----STVLRRPEMTPRWRGPAGASSAAMTRSMR 327 ARG LA + G + + TV R P ++P WR P ASS + RS R Sbjct: 260 ARGAALAIQGRAKGGAAGVQVLLARTVRRHPRVSP-WRSPRSASSPSTRRSSR 311
>VTNC_MOUSE (P29788) Vitronectin precursor (Serum spreading factor) (S-protein)| Length = 478 Score = 29.3 bits (64), Expect = 5.4 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 5/100 (5%) Frame = -3 Query: 401 RRPEMTPR-WRGPAGASSAAMTRSMRRQASSTSGTSALK---RRETAEQRPSERASASLL 234 R P+ R W G G AAM + S + A K +R + ++ S R Sbjct: 329 REPQFISRNWHGVPGKVDAAMAGRIYVTGSLSHSAQAKKQKSKRRSRKRYRSRRGRGHRR 388 Query: 233 KMRSTSESGTLSKWSSPCARSRSSANT-RCLDCILDWRIP 117 S S + S W S + S T D +DW +P Sbjct: 389 SQSSNSRRSSRSIWFSLFSSEESGLGTYNNYDYDMDWLVP 428
>GRPE_NEUCR (Q9P5U4) GrpE protein homolog, mitochondrial precursor| Length = 238 Score = 28.9 bits (63), Expect = 7.1 Identities = 20/88 (22%), Positives = 37/88 (42%) Frame = -3 Query: 434 KGLSTARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSE 255 + L + +RP + ++ A ++A RS R S+ + K E AEQ+ E Sbjct: 11 RALCSGARVAAQRPIASQIFQMQAARTAAPQLRSAARWYSAEA-EGEKKADEGAEQKEGE 69 Query: 254 RASASLLKMRSTSESGTLSKWSSPCARS 171 + LK + ++ +W C R+ Sbjct: 70 TDEVAALKKQLEAKDAEAREWKDKCLRT 97
>LEP4_PSEPU (P36642) Type 4 prepilin-like proteins leader peptide-processing| enzyme (Protein secretion protein XCPA) (Protein pilD) [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 288 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 262 GRCSAVSRRFNALVPLVDDACLRIDRVIA 348 GRCSA +R + PLV+ C + V+A Sbjct: 94 GRCSACKQRISVRYPLVEVGCALLSMVVA 122
>RAD14_CANAL (P53709) DNA repair protein RAD14 (Fragment)| Length = 121 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = -3 Query: 329 RRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGT--LSKWSSPCARSRSSAN 156 RR+ + + E R RA K+R G + WSSP + + Sbjct: 47 RREENKVKRKEKKYHDQLREMRKRTRAEEYTRKLRDGKSLGERHVHDWSSPVNIDKHTIK 106 Query: 155 TRCLDC 138 RC+DC Sbjct: 107 RRCIDC 112
>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -3 Query: 290 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 150 KRR E+R ERA + RS S S S+ S C+RSR +R Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318
>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein| (cAMP regulatory element associated protein 1) (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic acid-inducible phosphoprotein OA48-18) Length = 432 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -3 Query: 290 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 150 KRR E+R ERA + RS S S S+ S C+RSR +R Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318
>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein| Length = 432 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -3 Query: 290 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 150 KRR E+R ERA + RS S S S+ S C+RSR +R Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 28.5 bits (62), Expect = 9.2 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -3 Query: 365 AGASSAAMTRSMRRQASSTSGTSALK---RRETAEQRPSERASASLLKMRSTSESGTLSK 195 A SSAA + ASS+ +SA A PS AS+S S S S S Sbjct: 450 ASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSS 509 Query: 194 WSSPCARSRSSANT 153 +S + SSA++ Sbjct: 510 SASSSSAPSSSASS 523
>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)| Length = 1357 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = -3 Query: 401 RRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRS 222 ++ E P + P S AA ++ Q S +G+ ++ PS+R A L + Sbjct: 141 KKVEPVPVTKQPTPPSEAAASKKKPGQKKSKNGSDDQDKKVETLMVPSKRQEALPLHQET 200 Query: 221 TSESGTLSKWSS 186 ESG+ K +S Sbjct: 201 KQESGSGKKKAS 212
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 28.5 bits (62), Expect = 9.2 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 10/88 (11%) Frame = -3 Query: 437 PKGLSTARSTVLRRPEMTPRWRG-----PAGASSAAMTRSMRRQA-----SSTSGTSALK 288 P+G+ R+ R P+ RG PA A +A + S QA SS+S +S+ Sbjct: 540 PQGVGAKRAAPRRAPDSDSGDRGHGPLAPASAGAAPPSASPSSQAAVAAASSSSASSSSA 599 Query: 287 RRETAEQRPSERASASLLKMRSTSESGT 204 +A + +SAS S+S S + Sbjct: 600 SSSSASSSSASSSSASSSSASSSSASSS 627
>HAM1_XANOR (Q5H3S6) HAM1 protein homolog| Length = 199 Score = 28.5 bits (62), Expect = 9.2 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +1 Query: 172 LLAQGEDHFDSVPDSLVLLIFNKLADARSLGRCSAVSRRFNALVPLVDDACLRIDRVIAA 351 ++AQGE D VP++ + + N L AR SAV+ L L DD+ L +D A Sbjct: 28 IVAQGELGVDDVPETGLTFVENALIKAR---HASAVT----GLPALADDSGLIVD---AL 77 Query: 352 DDAP 363 D AP Sbjct: 78 DGAP 81
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705| Length = 313 Score = 28.5 bits (62), Expect = 9.2 Identities = 24/92 (26%), Positives = 40/92 (43%) Frame = -3 Query: 425 STARSTVLRRPEMTPRWRGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERAS 246 S ARST R +G+ S+ + + +S +SG+ R + R +S Sbjct: 205 SNARSTSSRSSGSRSSGSRSSGSRSSGSRSTGSKTSSRSSGSKT--SRSSGSSRSRSGSS 262 Query: 245 ASLLKMRSTSESGTLSKWSSPCARSRSSANTR 150 S S SGT + S+ + SRS +++R Sbjct: 263 GSKSGRSRNSRSGTSGRSSNSRSGSRSGSSSR 294 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,287,872 Number of Sequences: 219361 Number of extensions: 557044 Number of successful extensions: 2824 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2811 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
