ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast44a07 |
|---|---|
| Clone Library Name | barley_pub |
>LEUD2_THEMA (Q9WZ25) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 166 Score = 35.0 bits (79), Expect = 0.081 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 391 G+ FV GDN++TD+IIPA +L S P E K Sbjct: 7 GKVFVFGDNVNTDEIIPARYLN--TSDPQELAK 37
>LEUD_AQUAE (O67399) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 168 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = +2 Query: 287 FHGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 391 F G + GDN+DTDQIIPA +L S P E K Sbjct: 5 FRGRVWKFGDNVDTDQIIPARYLN--TSDPYELAK 37
>LEUD1_METKA (Q8TX94) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 170 Score = 34.3 bits (77), Expect = 0.14 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 391 G +V GD+IDTDQIIP +LT P+E K Sbjct: 7 GRAWVFGDDIDTDQIIPGRYLT--TQDPEELAK 37
>LEUD2_METKA (Q8TW31) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 168 Score = 33.5 bits (75), Expect = 0.24 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVG 415 G V GD++DTDQIIP L V Y +LG +A G Sbjct: 5 GRAHVFGDDVDTDQIIPGRCLRRV-----SYDELGRYAMTG 40
>LEUD_CLOAB (Q97EE1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 163 Score = 32.3 bits (72), Expect = 0.52 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = +2 Query: 290 HGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 391 +G+ GDNIDTD IIPA +L S P+E K Sbjct: 4 NGDVLKYGDNIDTDVIIPARYLN--TSVPEELAK 35
>LEUD1_PYRAB (Q9UZ06) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 164 Score = 31.2 bits (69), Expect = 1.2 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 391 G + GDNIDTD IIPA +L S P E K Sbjct: 5 GRAWKYGDNIDTDVIIPARYLN--TSDPKELAK 35
>PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase| priA) (Replication factor Y) Length = 811 Score = 30.8 bits (68), Expect = 1.5 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Frame = -1 Query: 231 RWHLSETVAG----WRGAA*MRA--LVGARPGXXXXXXXXXXXXVNDKRGAAVMVASPCG 70 +WH A WR A RA +VGAR V+++ +A Sbjct: 304 QWHSQMGAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVP 363 Query: 69 GDCRGEALKRARAGGFPFVLQSA 1 + R A+ RAR GGFP VL SA Sbjct: 364 YNARDMAVVRARLGGFPAVLASA 386
>LEUD2_METJA (Q58673) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 168 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVG 415 G + G+N+DTD I+PA + LV +KP+E L F G Sbjct: 7 GRVWKFGNNVDTDAILPARY--LVYTKPEE---LAQFVMTG 42
>LEUD_STRT2 (Q5M407) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSK 373 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRT1 (Q5LZF5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSK 373 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRMU (Q8DTG5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSK 373 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRGN (Q9AIM2) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSK 373 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_LACLA (Q02144) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSK 373 V+ DNIDTDQIIP + L + K Sbjct: 14 VMNDNIDTDQIIPKQFLKAIDKK 36
>LEUD_PYRAE (Q8ZW36) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHL 355 G V GD IDTD IIPA++L Sbjct: 5 GRALVYGDKIDTDVIIPAKYL 25
>LEUD1_PYRFU (Q8U2A0) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 164 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHL 355 G + GDNIDTD IIPA +L Sbjct: 5 GRAWKYGDNIDTDVIIPARYL 25
>LEUD_STAEQ (Q5HMF6) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 189 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL V P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRVSKSGFGPFAFDEWRYL 51
>LEUD_STAS1 (Q49Z15) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 51
>LEUD_STAHJ (Q4L7U3) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRITKSGFGPFAFDEWRYL 51
>LEUD_STAAW (Q8NVI9) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAS (Q6G7P8) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAR (Q6GF13) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAN (P65280) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAM (P65279) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAC (Q5HEE1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 314 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 394 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_SYNY3 (P74207) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 200 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLV 364 +VGD+IDTD+IIPA L V Sbjct: 14 LVGDDIDTDRIIPARFLRCV 33
>RIMM_DESVH (Q72DU2) Probable 16S rRNA-processing protein rimM| Length = 176 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +2 Query: 185 QAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAAFHGECFVVGDN----IDTDQI 337 +AAPR S+R H+ RPL D ++ G +V ++ +D D++ Sbjct: 44 RAAPRPVKVQSMRMHKGRPLVIFEGVNDRTAAELLRGHVMLVPEDTLPELDEDEV 98
>LEUD_THETN (Q8RDK1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHL 355 G+ GDNIDTD IIPA L Sbjct: 3 GKAIKYGDNIDTDVIIPARFL 23
>LEUD_HELHP (Q7VH32) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 165 Score = 28.9 bits (63), Expect = 5.8 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 Query: 311 GDNIDTDQIIPAEHLTLVPSK 373 GDN+DTD IIPA +L K Sbjct: 11 GDNVDTDVIIPARYLNTADHK 31
>ERBB3_MOUSE (Q61526) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) (c-erbB3) (Glial growth factor receptor) Length = 1339 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = -1 Query: 330 SVSMLSPTTKHSPWNAADDGESPVAAAAVRGRERW 226 S S+LSP++ + P N ++ GE+ + +A + GRE++ Sbjct: 1041 SQSLLSPSSGYMPMNQSNLGEACLDSAVLGGREQF 1075
>APGM2_METTH (O26518) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (BPG-independent PGAM 2) (aPGAM 2) Length = 402 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/61 (24%), Positives = 23/61 (37%) Frame = +2 Query: 179 RIQAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAAFHGECFVVGDNIDTDQIIPAEHLT 358 RI P HP + +R H P+ C + GD +D DQ+ + T Sbjct: 333 RIAVLPDHPTPIEIRTHVPDPVP-----------------CILAGDGVDADQVKSYDEFT 375 Query: 359 L 361 + Sbjct: 376 V 376
>LEUD_BACHK (Q6HLF0) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 409 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>LEUD_BACCZ (Q63DX5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 409 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>LEUD_BACAN (Q81T65) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 409 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney| disease protein 1) Length = 4303 Score = 28.9 bits (63), Expect = 5.8 Identities = 23/69 (33%), Positives = 32/69 (46%) Frame = +2 Query: 182 IQAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAAFHGECFVVGDNIDTDQIIPAEHLTL 361 +Q A ++ A S C +R AAT SP A+H + DTD+ AEH L Sbjct: 2057 VQDAVQYVALQSGPCFTNRSAQFEAATSPSPRRVAYHWDFGDGSPGQDTDE-PRAEHSYL 2115 Query: 362 VPSKPDEYR 388 +P +YR Sbjct: 2116 ---RPGDYR 2121
>LEUD_BACCR (Q81G09) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 194 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 409 ++ DNIDTDQIIP ++L K E G F F Sbjct: 15 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 44
>ERBB3_RAT (Q62799) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) (c-erbB3) Length = 1339 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = -1 Query: 330 SVSMLSPTTKHSPWNAADDGESPVAAAAVRGRERW 226 S S+LSP++ + P N + GE+ + +A + GRE++ Sbjct: 1041 SQSLLSPSSGYMPMNQSSLGEACLDSAVLGGREQF 1075
>LEUD_BACC1 (Q73B97) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHL 355 ++ DNIDTDQIIP ++L Sbjct: 14 LMNDNIDTDQIIPKQYL 30
>LEUD_SULAC (Q4JC10) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 11/41 (26%) Frame = +2 Query: 311 GDNIDTDQIIPAEHL-----------TLVPSKPDEYRKLGS 400 GD IDTD IIPA++L + P P+ Y+K S Sbjct: 11 GDKIDTDIIIPAKYLKYTDPQYLAQHAMEPLDPEFYKKASS 51
>LEUD_ANASP (Q8YX03) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 202 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +2 Query: 305 VVGDNIDTDQIIPAEHLTLV 364 +VG++IDTD+IIPA +L + Sbjct: 15 LVGNDIDTDRIIPARYLKAI 34
>LEUD1_METTH (O26917) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 170 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 293 GECFVVGDNIDTDQIIPAEHL 355 G + GDN+DTD IIP +L Sbjct: 7 GRVWRFGDNVDTDMIIPGRYL 27
>LEUD2_DEIRA (Q9RTI0) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 208 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = +2 Query: 314 DNIDTDQIIPAEHLT 358 D+I+TD+IIPA HLT Sbjct: 10 DHINTDEIIPARHLT 24
>NPHN_HUMAN (O60500) Nephrin precursor (Renal glomerulus-specific cell adhesion| receptor) Length = 1241 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +2 Query: 155 PGRAPTRARIQAAPR--HPATVSLRCHRSRPLTAAAATGDSPSSAAFH 292 P R R ++ AP+ HP PLT AA GDS SSA H Sbjct: 825 PARRLLRLVVRFAPQVEHPT----------PLTKVAAAGDSTSSATLH 862 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,306,830 Number of Sequences: 219361 Number of extensions: 778062 Number of successful extensions: 2968 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2966 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
