ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHER1_VIBCH (Q9KQ06) Chemotaxis protein methyltransferase 1 (EC ... 29 3.8
2CHER_VIBPA (Q9X9K2) Chemotaxis protein methyltransferase (EC 2.1... 28 6.5
3MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domai... 28 6.5

>CHER1_VIBCH (Q9KQ06) Chemotaxis protein methyltransferase 1 (EC 2.1.1.80)|
          Length = 275

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 195 WCSFWSAGQAPYQIGWTVMSA--ARTGPMWYSSLTRSDDPSNFLDAPRAATASRGGHGR 25
           W +  S+GQ PY +  T++     R G +   S+T +D  ++ LD  RA        GR
Sbjct: 108 WSAASSSGQEPYSMAMTILEVQQKRPGLLPSVSITATDISASMLDMCRAGIYDNLALGR 166



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>CHER_VIBPA (Q9X9K2) Chemotaxis protein methyltransferase (EC 2.1.1.80)|
          Length = 275

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 195 WCSFWSAGQAPYQIGWTVMSAARTGP--MWYSSLTRSDDPSNFLDAPRAATASRGGHGR 25
           W +  S+GQ PY I  T++   +  P  +   S+T +D  ++ L+  RA        GR
Sbjct: 108 WSAASSSGQEPYSIAMTILETQQRKPGLLPSVSITATDISASMLEMCRAGVYDNLALGR 166



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>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 2   AAPLAMAWRPWPPRDAVAALGASKKFEGSSDLV 100
           AAP A A R  PPR  V   GA+    GS +++
Sbjct: 67  AAPTAQAPRTGPPRTTVRKTGATTPSAGSPEII 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.295    0.107    0.282 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,759,035
Number of Sequences: 219361
Number of extensions: 270414
Number of successful extensions: 504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
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