ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast43h03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 412 bits (208), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Plus Query: 112 ccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccgagga 171 |||||||||| | ||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 172 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 231 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 232 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 291 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacctgg 289 Query: 292 ccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaagg 351 ||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||| Sbjct: 290 ccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaacgctgccaagg 349 Query: 352 acaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccagg 411 ||||||||||| |||||||| | || | ||| ||||||| ||| | | |||||| ||| Sbjct: 350 acaacaagaagacccgcatcatcccgcgccacgtgctccttgccatccgcaacgacgagg 409 Query: 412 agctcgggaggctgctggccggcgtcaccatcgcgcacggcggc 455 ||||||| | ||||||| |||||||||||||||| ||||||||| Sbjct: 410 agctcggcaagctgctgtccggcgtcaccatcgcccacggcggc 453
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 412 bits (208), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Plus Query: 112 ccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccgagga 171 |||||||||| | ||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 172 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 231 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 232 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 291 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacctgg 289 Query: 292 ccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaagg 351 ||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||| Sbjct: 290 ccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaacgctgccaagg 349 Query: 352 acaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccagg 411 ||||||||||| |||||||| | || | ||| ||||||| ||| | | |||||| ||| Sbjct: 350 acaacaagaagacccgcatcatcccgcgccacgtgctccttgccatccgcaacgacgagg 409 Query: 412 agctcgggaggctgctggccggcgtcaccatcgcgcacggcggc 455 ||||||| | ||||||| |||||||||||||||| ||||||||| Sbjct: 410 agctcggcaagctgctgtccggcgtcaccatcgcccacggcggc 453
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 343 bits (173), Expect = 3e-91 Identities = 315/361 (87%), Gaps = 1/361 (0%) Strand = Plus / Plus Query: 96 atggacgcctcgggcaccggagccggagcgaaggggaagaagggcgcggcgggccgcaag 155 ||||||||| | ||||| ||||| |||| ||||| ||||||||| ||||| || |||||| Sbjct: 51 atggacgccaccggcactggagctggagggaaggcgaagaagggagcggccggtcgcaag 110 Query: 156 gccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttcccc 215 |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 111 gccggcgggccgaggaagaagtcggtgacgaggtccgtgaaggccgggctccagttcccc 170 Query: 216 gtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggc 275 ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| || Sbjct: 171 gtcggccgcatcgggcgctacctcaagaagggccgctacgcgcagcgcgtcggcagcggt 230 Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||||||||||||||| |||||||| |||||||| ||||| ||| | ||||||||||| Sbjct: 231 gcccccgtctacctcgcggccgtcctggagtacctcgccgctgaggtcctggagctcgcc 290 Query: 336 gggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgcc 395 || ||||| |||||||||||||||||| | |||||||| || | ||| |||| || || Sbjct: 291 ggcaacgctgccaaggacaacaagaagacgcgcatcgtcccgcgccacgtgctgctggcg 350 Query: 396 gtgaggaacgaccaggagctcggg-aggctgctggccggcgtcaccatcgcgcacggcgg 454 | | |||||| ||||||||||| ||||||||| ||||||| |||||||| |||||||| Sbjct: 351 atccgcaacgacgaggagctcgggaaggctgctgaccggcgtgaccatcgcccacggcgg 410 Query: 455 c 455 | Sbjct: 411 c 411
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 337 bits (170), Expect = 2e-89 Identities = 290/330 (87%) Strand = Plus / Plus Query: 126 aaggggaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacg 185 |||||||||||||| ||||| || |||||||| ||||| || |||||||||||||||||| Sbjct: 242 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 301 Query: 186 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 245 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 302 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 361 Query: 246 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 305 |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 362 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacctcgccgccgtcctggag 421 Query: 306 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcc 365 ||||| ||||||||| | ||||| | || |||||||| || || |||||||||||| | Sbjct: 422 tacctcgccgccgaggttctggagttggcagggaacgcggcgaaagacaacaagaagacg 481 Query: 366 cgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctg 425 |||||| | || | ||| ||||||| || | | |||||| |||||||||||| |||| Sbjct: 482 cgcatcatcccgcgccacgtgctcctggcgatccgcaacgacgaggagctcgggaagctg 541 Query: 426 ctggccggcgtcaccatcgcgcacggcggc 455 |||||||||||||||||||||||||||||| Sbjct: 542 ctggccggcgtcaccatcgcgcacggcggc 571
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 321 bits (162), Expect = 1e-84 Identities = 285/326 (87%) Strand = Plus / Plus Query: 126 aaggggaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacg 185 |||||||||||||| ||||| || |||||||| ||||| || |||||||||||||||||| Sbjct: 93 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 152 Query: 186 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 245 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 153 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 212 Query: 246 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 305 |||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct: 213 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacctcgccgccgttctggag 272 Query: 306 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcc 365 ||||| ||||||||| | ||||| | || |||||||| || || |||||||||||| | Sbjct: 273 tacctcgccgccgaggttctggagttggcagggaacgcggcgaaagacaacaagaagacg 332 Query: 366 cgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctg 425 |||||| | || | ||| ||||||| || | | |||||| |||||||||||| |||| Sbjct: 333 cgcatcatcccgcgccacgtgctcctggcgatccgcaacgacgaggagctcgggaagctg 392 Query: 426 ctggccggcgtcaccatcgcgcacgg 451 |||||||||||||||||||||||||| Sbjct: 393 ctggccggcgtcaccatcgcgcacgg 418
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 309 bits (156), Expect = 4e-81 Identities = 252/284 (88%) Strand = Plus / Plus Query: 168 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 227 ||||||||| ||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 87 aggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcatc 146 Query: 228 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 287 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 147 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 206 Query: 288 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 347 ||||||||||||||||||||||| ||||||||| || ||||||| ||||| ||||| ||| Sbjct: 207 ctcgccgccgtcctcgagtacctcgccgccgaggtgctggagcttgccggcaacgcggcc 266 Query: 348 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 407 ||||||||||||||| |||||||| | || | |||||||| ||||| || | |||||| Sbjct: 267 aaggacaacaagaagacccgcatcatcccgcgccacctgctgctcgctgtccgcaacgac 326 Query: 408 caggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 451 ||||||||||| |||||||| || |||||||||||||| ||||| Sbjct: 327 caggagctcggcaggctgctcgctggcgtcaccatcgcccacgg 370
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 309 bits (156), Expect = 4e-81 Identities = 255/288 (88%) Strand = Plus / Plus Query: 168 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 227 ||||||||| ||||||| || || |||||||||||||| ||||||||||||||||||||| Sbjct: 110 aggaagaaggcggtgacccgctccgtcaaggccgggctgcagttccccgtcggccgcatc 169 Query: 228 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 287 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 170 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 229 Query: 288 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 347 ||||||||||||||||||||||| ||||||||| | ||||||| ||||| ||||| ||| Sbjct: 230 ctcgccgccgtcctcgagtacctcgccgccgaggtcctggagcttgccggcaacgcggcc 289 Query: 348 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 407 ||||||||||||||| | |||||| | || | |||||||| || ||||| | |||||| Sbjct: 290 aaggacaacaagaagacgcgcatcatcccgcgccacctgctgctggccgtccgcaacgac 349 Query: 408 caggagctcgggaggctgctggccggcgtcaccatcgcgcacggcggc 455 ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 350 caggagctcggcaggctgctcgccggcgtcaccatcgcccacggcggc 397
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 307 bits (155), Expect = 2e-80 Identities = 263/299 (87%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 58 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 117 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 118 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 177 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| Sbjct: 178 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctggagctc 237 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 392 ||||||||||| |||| ||||||||||||| | | ||| | || | ||| |||| || Sbjct: 238 gccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctg 297 Query: 393 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 451 || | ||||||||| |||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 298 gcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacgg 356
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 303 bits (153), Expect = 3e-79 Identities = 255/289 (88%) Strand = Plus / Plus Query: 167 gaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcat 226 |||||||||| ||||||| || || || |||||||||||||||||||||||||||||||| Sbjct: 107 gaggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcat 166 Query: 227 cgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtcta 286 |||||| ||||||||||||||||| |||||| || ||||||| | |||||||||||||| Sbjct: 167 cgggcgctacctcaagaagggccgctacgcgcaggccgtcggctccggcgcccccgtcta 226 Query: 287 cctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgc 346 |||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||| || Sbjct: 227 cctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctcgccggcaacgcggc 286 Query: 347 caaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacga 406 |||||||||||||||| | |||||| | || | |||||||| || ||||| | ||||| Sbjct: 287 caaggacaacaagaagacgcgcatcatcccgcgccacctgctgctggccgtccgcaacga 346 Query: 407 ccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcggc 455 ||||||||| || |||||||| ||||||||||||||||| ||||||||| Sbjct: 347 ccaggagctgggcaggctgctcgccggcgtcaccatcgcccacggcggc 395
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 299 bits (151), Expect = 4e-78 Identities = 262/299 (87%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 148 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 207 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 208 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 267 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 |||||||||||||||||||||||||||||||||||||| || |||||| || |||||||| Sbjct: 268 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggtgctggagctc 327 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 392 ||||||||||| |||| ||||||||||||| | | ||| | || | ||| |||| || Sbjct: 328 gccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctg 387 Query: 393 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 451 || | ||||||||| |||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 388 gcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacgg 446
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 295 bits (149), Expect = 6e-77 Identities = 260/297 (87%) Strand = Plus / Plus Query: 159 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 218 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 132 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 191 Query: 219 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 278 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 192 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 251 Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 |||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||||| Sbjct: 252 cccgtctacctcgccgccgtcctcgagtacctcgccgcagaggtgctggagctcgccggg 311 Query: 339 aacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtg 398 ||||| || ||||||||||||| ||| ||| | || |||||| |||| || || | Sbjct: 312 aacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcgatc 371 Query: 399 aggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcggc 455 | |||||| |||||||||||| |||||| ||||| ||||||||||||||||||||| Sbjct: 372 cgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 428
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 250 bits (126), Expect = 3e-63 Identities = 291/347 (83%) Strand = Plus / Plus Query: 108 ggcaccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccg 167 ||||||||||| || | |||||||||||||| ||||| || ||||||| ||||||||| Sbjct: 81 ggcaccggagcagggggtaaggggaagaagggagcggccgggcgcaaggtcggcgggcca 140 Query: 168 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 227 ||||||||||||||| || |||| || |||||||| |||||||||||||||||||||||| Sbjct: 141 aggaagaagtcggtgtcgaggtccgtgaaggccggtctccagttccccgtcggccgcatc 200 Query: 228 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 287 ||||| ||| | ||||||||||| |||||| || |||||||| ||||||||||||||| Sbjct: 201 gggcgctacttgaagaagggccgctacgcgcagnyygtcggcaccggcgcccccgtctac 260 Query: 288 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 347 |||||||| |||||||| ||||| ||||| ||| | ||||||||||||| || || ||| Sbjct: 261 ctcgccgctgtcctcgaatacctcgccgctgaggttctggagctcgccggtaatgctgcc 320 Query: 348 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 407 | ||||||||||||| | ||||| | || | ||| |||| || || | |||||||| Sbjct: 321 agggacaacaagaagactcgcattattccgcgccacgtgcttctggcgatccggaacgac 380 Query: 408 caggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 ||||||| |||| |||| ||| |||||| |||||||| |||||||| Sbjct: 381 gaggagcttgggaagctgttgggcggcgtgaccatcgctcacggcgg 427
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 240 bits (121), Expect = 3e-60 Identities = 253/297 (85%) Strand = Plus / Plus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 57 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 116 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 117 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 176 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 337 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 177 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 236 Query: 338 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 397 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 237 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 296 Query: 398 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 | |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 297 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 353
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 240 bits (121), Expect = 3e-60 Identities = 253/297 (85%) Strand = Plus / Plus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 128 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 187 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 188 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 247 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 337 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 248 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 307 Query: 338 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 397 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 308 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 367 Query: 398 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 | |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 368 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 424
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 232 bits (117), Expect = 8e-58 Identities = 252/297 (84%) Strand = Plus / Plus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | | || |||||||||||||||||||||||||| Sbjct: 127 cggcgggccgaagaagaagccggtgtccccctccgtcaaggccgggctccagttccccgt 186 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 187 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 246 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 337 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 247 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 306 Query: 338 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 397 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 307 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 366 Query: 398 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 | |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 367 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 423
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 230 bits (116), Expect = 3e-57 Identities = 155/168 (92%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 17416697 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 17416756 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 17416757 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 17416816 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 17416817 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 17416864 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 17416980 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 17417039 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 17417040 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 17417099 Query: 445 cgcacgg 451 ||||||| Sbjct: 17417100 cgcacgg 17417106 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccccgtctacctcgccgccg 297 |||||||||||||||||||| Sbjct: 31905196 ccccgtctacctcgccgccg 31905177
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 230 bits (116), Expect = 3e-57 Identities = 155/168 (92%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 70089 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 70148 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 70149 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 70208 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 70209 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 70256 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 70372 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 70431 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 70432 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 70491 Query: 445 cgcacgg 451 ||||||| Sbjct: 70492 cgcacgg 70498
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9471665 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9471606 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9471605 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9471546 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 9471545 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 9471498 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 173 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 232 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 28997918 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 28997977 Query: 233 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 292 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 28997978 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 28998037 Query: 293 cgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||| ||||||||| Sbjct: 28998038 cgccgtcctcgagtacctcgccgccgag 28998065 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2463931 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2463989 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 2463990 cccgtcggccgtatcgggcgctacctcaagaa 2464021 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 9471392 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 9471333 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 9471332 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 9471273 Query: 445 cgcacgg 451 ||||||| Sbjct: 9471272 cgcacgg 9471266 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 28998174 tggagctggccgggaacgcggcgagggacaacaagaag 28998211
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 169065 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 169006 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 169005 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 168946 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 168945 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 168898 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 168792 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 168733 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 168732 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 168673 Query: 445 cgcacgg 451 ||||||| Sbjct: 168672 cgcacgg 168666
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9469786 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9469727 Query: 213 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 272 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9469726 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9469667 Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 9469666 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 9469619 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 173 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 232 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 29089340 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 29089399 Query: 233 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 292 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 29089400 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 29089459 Query: 293 cgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||| ||||||||| Sbjct: 29089460 cgccgtcctcgagtacctcgccgccgag 29089487 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2464041 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2464099 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 2464100 cccgtcggccgtatcgggcgctacctcaagaa 2464131 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 9469513 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 9469454 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 9469453 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 9469394 Query: 445 cgcacgg 451 ||||||| Sbjct: 9469393 cgcacgg 9469387 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 29089596 tggagctggccgggaacgcggcgagggacaacaagaag 29089633
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 159 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 218 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 55 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 114 Query: 219 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 278 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 115 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 174 Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgc 316 |||||||||||||||||||||||||||||||| ||||| Sbjct: 175 cccgtctacctcgccgccgtcctcgagtacctcgccgc 212 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 272 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 331 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 332 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 391 Query: 445 cgcacggcggc 455 ||||||||||| Sbjct: 392 cgcacggcggc 402
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 159 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 218 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 706990 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 707049 Query: 219 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 278 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 707050 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 707109 Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgc 316 |||||||||||||||||||||||||||||||| ||||| Sbjct: 707110 cccgtctacctcgccgccgtcctcgagtacctcgccgc 707147 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 22512739 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 22512680 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 22512679 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 22512620 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 22512619 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 22512577 Score = 89.7 bits (45), Expect = 7e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 402 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 22512419 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 22512367 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 707235 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 707294 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 707295 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 707354 Query: 445 cgcacggcggc 455 ||||||||||| Sbjct: 707355 cgcacggcggc 707365
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 159 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 218 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 52189 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 52248 Query: 219 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 278 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 52249 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 52308 Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgc 316 |||||||||||||||||||||||||||||||| ||||| Sbjct: 52309 cccgtctacctcgccgccgtcctcgagtacctcgccgc 52346 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 52434 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 52493 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 52494 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 52553 Query: 445 cgcacggcggc 455 ||||||||||| Sbjct: 52554 cgcacggcggc 52564
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 210 bits (106), Expect = 3e-51 Identities = 254/305 (83%) Strand = Plus / Plus Query: 150 cgcaaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccag 209 ||||||| ||||||||| ||||||||||||||| || |||| || ||||||||||||||| Sbjct: 142 cgcaaggtcggcgggccaaggaagaagtcggtgtcgaggtccgtgaaggccgggctccag 201 Query: 210 ttccccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggc 269 ||||||||||||||||||||||| ||| | ||||||||||| |||||| |||| |||||| Sbjct: 202 ttccccgtcggccgcatcgggcgctacttgaagaagggccgctacgcgcagcgtgtcggc 261 Query: 270 acgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggag 329 || |||| |||||||||||||| |||||||| ||||| ||||| ||| | ||||| Sbjct: 262 accggcgnnnnngtctacctcgccgctgtcctcgaatacctcgccgctgaggttctggag 321 Query: 330 ctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctc 389 ||||| || || || |||| ||||||||||||| | ||||| | || | ||| |||| Sbjct: 322 ctcgctggtaatgctgccagggacaacaagaagactcgcattattccgcgccacgtgctt 381 Query: 390 ctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcac 449 || || | |||||||| ||||||| |||| |||||||| |||||| |||||||| ||| Sbjct: 382 ctggcgatccggaacgacgaggagcttgggaagctgctgggcggcgtgaccatcgctcac 441 Query: 450 ggcgg 454 ||||| Sbjct: 442 ggcgg 446
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 168 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 227 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 228 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 287 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 288 ctcgccgccgtcctcgagtacctggccgccgag 320 ||||||||||||||||||||||| ||||||||| Sbjct: 1934 ctcgccgccgtcctcgagtacctcgccgccgag 1966 Score = 133 bits (67), Expect = 5e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| ||||| ||||| |||||||||||||||||| |||||||| | || | |||| Sbjct: 2066 tggagcttgccggcaacgcagccaaggacaacaagaagacccgcatcatcccgcgccacc 2125 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| |||||||| | ||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2126 tgctgctcgccgtccgcaacgaccaggagctcggcaggctgcttgccggcgtcaccatcg 2185 Query: 445 cgcacggcggc 455 | ||||||||| Sbjct: 2186 cccacggcggc 2196
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 168 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 227 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 228 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 287 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 288 ctcgccgccgtcctcgagtacctggccgccgag 320 ||||||||||||||||||||||| ||||||||| Sbjct: 1934 ctcgccgccgtcctcgagtacctcgccgccgag 1966 Score = 133 bits (67), Expect = 5e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| ||||| ||||| |||||||||||||||||| |||||||| | || | |||| Sbjct: 2066 tggagcttgccggcaacgcagccaaggacaacaagaagacccgcatcatcccgcgccacc 2125 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 |||| |||||||| | ||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2126 tgctgctcgccgtccgcaacgaccaggagctcggcaggctgcttgccggcgtcaccatcg 2185 Query: 445 cgcacggcggc 455 | ||||||||| Sbjct: 2186 cccacggcggc 2196
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 192 bits (97), Expect = 7e-46 Identities = 247/297 (83%) Strand = Plus / Plus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| || |||| ||||| ||||||| || ||||||||||||| |||||||| Sbjct: 113 cggcgggccgaagaggaagccggtgtcgcggtcagttaaggccgggctccttttccccgt 172 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 ||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| Sbjct: 173 gggccgcatcggacggtacctgaagaaagggcggtacgcgcagcgcgtgggcacgggcgc 232 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 337 ||||| | ||| |||||||||||||||||||| ||||| ||| | ||||||| || || Sbjct: 233 tcccgtgttcctggccgccgtcctcgagtacctcgccgctgaggtcctggagctggctgg 292 Query: 338 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 397 ||||| || ||||||||||| |||||||| | || | ||||| ||||||||| | Sbjct: 293 caacgcggcgcgcgacaacaagaaaacccgcatcatcccgcgccacctcctcctcgccat 352 Query: 398 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 | |||||| |||||||||| | |||||||| || |||||||||||||||||||| Sbjct: 353 ccgcaacgacgaggagctcggcaagctgctgggtggggtcaccatcgcgcacggcgg 409
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 190 bits (96), Expect = 3e-45 Identities = 228/272 (83%) Strand = Plus / Plus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 159 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 218 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 219 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 278 Query: 294 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 353 ||||||||||||||||| ||||||||| || ||||||| || |||||||| || | |||| Sbjct: 279 gccgtcctcgagtacctcgccgccgaggtgctggagctggcggggaacgcggcgagggac 338 Query: 354 aacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggag 413 ||||||||| ||| |||||||| |||||| | | || || ||| | |||||| ||||| Sbjct: 339 aacaagaagaaccggatcgtgccgaggcacatccagctggcggtgcgcaacgacgaggag 398 Query: 414 ctcgggaggctgctggccggcgtcaccatcgc 445 || | |||||||| | || |||||||||||| Sbjct: 399 ctgagcaggctgctcggcgccgtcaccatcgc 430
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 182 bits (92), Expect = 7e-43 Identities = 149/168 (88%) Strand = Plus / Plus Query: 195 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 254 |||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| Sbjct: 177 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 236 Query: 255 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 314 ||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 237 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 296 Query: 315 gccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 |||||| || ||||||| ||||||||||| || | ||||||||||||| Sbjct: 297 gccgaggtgctggagctggccgggaacgcggcgagggacaacaagaag 344
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 7789 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 7730 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 7729 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 7670 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7669 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 7627 Score = 89.7 bits (45), Expect = 7e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 402 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 7469 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 7417
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 158 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 217 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 102146 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 102087 Query: 218 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 277 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 102086 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 102027 Query: 278 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102026 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 101984 Score = 89.7 bits (45), Expect = 7e-15 Identities = 51/53 (96%) Strand = Plus / Minus Query: 402 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 101826 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcgg 101774
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 163 bits (82), Expect = 6e-37 Identities = 217/262 (82%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 63 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 122 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 123 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 182 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||||||| | | ||||||||||||||||| || ||||||||||||| | || ||||| Sbjct: 183 cgccgaggttcttgagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgt 242 Query: 374 gcccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccgg 433 ||| |||||| | | ||||||||| | |||||| ||||||| | | ||||| | || Sbjct: 243 gccgaggcacatccagctcgccgtgcgcaacgacgaggagctgtcgcgcctgctcggcgc 302 Query: 434 cgtcaccatcgcgcacggcggc 455 |||||||||||| |||||||| Sbjct: 303 cgtcaccatcgccaacggcggc 324
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 159 bits (80), Expect = 1e-35 Identities = 215/260 (82%) Strand = Plus / Plus Query: 195 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 254 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 98 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 157 Query: 255 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 314 | |||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 158 tcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgcc 217 Query: 315 gccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtg 374 |||||||| | ||| | || |||||||| || ||||||||||||| ||| ||| | Sbjct: 218 gccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatc 277 Query: 375 cccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggc 434 || ||||| | || || || | | |||||| |||||||||||| ||| ||||||||| Sbjct: 278 ccgcggcacgtactgctggcgatccgcaacgacgaggagctcgggaagctactggccggc 337 Query: 435 gtcaccatcgcgcacggcgg 454 ||||||||||| |||||||| Sbjct: 338 gtcaccatcgcacacggcgg 357
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 173 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 232 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 38059 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 38118 Query: 233 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 292 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 38119 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 38178 Query: 293 cgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||| ||||||||| Sbjct: 38179 cgccgtcctcgagtacctcgccgccgag 38206 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 38315 tggagctggccgggaacgcggcgagggacaacaagaag 38352
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 173 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 232 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141373 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 141314 Query: 233 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 292 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 141313 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 141254 Query: 293 cgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||| ||||||||| Sbjct: 141253 cgccgtcctcgagtacctcgccgccgag 141226 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 141117 tggagctggccgggaacgcggcgagggacaacaagaag 141080
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 173 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 232 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 181213 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 181272 Query: 233 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 292 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 181273 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 181332 Query: 293 cgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||| ||||||||| Sbjct: 181333 cgccgtcctcgagtacctcgccgccgag 181360 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 181469 tggagctggccgggaacgcggcgagggacaacaagaag 181506
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 157 bits (79), Expect = 4e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 178 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 237 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 238 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 297 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||||||| || ||||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 298 cgccgaggtgctggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgt 357 Query: 374 gcc 376 ||| Sbjct: 358 gcc 360
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 157 bits (79), Expect = 4e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 177 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 236 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 237 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 296 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||||||| || ||||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 297 cgccgaggtgctggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgt 356 Query: 374 gcc 376 ||| Sbjct: 357 gcc 359
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 151 bits (76), Expect = 2e-33 Identities = 226/276 (81%) Strand = Plus / Plus Query: 131 gaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacgcggtc 190 |||||||||||| | || ||||||| |||||| ||||||||||| |||||| | || || Sbjct: 51 gaagaagggcgccggcggacgcaagggcggcggcccgaggaagaaatcggtgtctcgatc 110 Query: 191 ggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccg 250 |||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||| | Sbjct: 111 cgtcaaggccgggctccagttccccgttggccgtctcggccgatacttgaagaagggcag 170 Query: 251 gtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacct 310 |||||| |||| |||||||| || || || |||||||||||||||||| | |||||||| Sbjct: 171 gtacgctcagcgtgtcggcaccggagctccggtctacctcgccgccgtcttggagtacct 230 Query: 311 ggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcat 370 || || ||| | |||||| | ||||| ||||| || | |||||| |||||| || || Sbjct: 231 cgctgctgaggtattggagttggccggaaacgcggcgagggacaataagaagaatcggat 290 Query: 371 cgtgcccaggcacctgctcctcgccgtgaggaacga 406 | | ||||||||| |||| || || ||||||||||| Sbjct: 291 catacccaggcacgtgctgctggcagtgaggaacga 326
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 331 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 332 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 391 Query: 374 gcc 376 ||| Sbjct: 392 gcc 394
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20924851 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20924792 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 20924791 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 20924732 Query: 294 gccgtcctcgagtacctggccgccgag 320 ||||||||||||||||| ||||||||| Sbjct: 20924731 gccgtcctcgagtacctcgccgccgag 20924705 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14469028 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14468969 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 14468968 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 14468909 Query: 314 cgccgag 320 ||||||| Sbjct: 14468908 cgccgag 14468902 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 14468694 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 14468643 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 20924602 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 20924543 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 20924542 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 20924483 Query: 445 c 445 | Sbjct: 20924482 c 20924482
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 331 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 332 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 391 Query: 374 gcc 376 ||| Sbjct: 392 gcc 394
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 213 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 272 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 273 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 332 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 333 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 392 Query: 374 gcc 376 ||| Sbjct: 393 gcc 395
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20851065 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20851006 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 20851005 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 20850946 Query: 294 gccgtcctcgagtacctggccgccgag 320 ||||||||||||||||| ||||||||| Sbjct: 20850945 gccgtcctcgagtacctcgccgccgag 20850919 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14423312 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14423253 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 14423252 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 14423193 Query: 314 cgccgag 320 ||||||| Sbjct: 14423192 cgccgag 14423186 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 14422978 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 14422927 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 20850816 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 20850757 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 20850756 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 20850697 Query: 445 c 445 | Sbjct: 20850696 c 20850696
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 10341 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 10282 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 10281 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 10222 Query: 294 gccgtcctcgagtacctggccgccgag 320 ||||||||||||||||| ||||||||| Sbjct: 10221 gccgtcctcgagtacctcgccgccgag 10195 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 10092 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 10033 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 10032 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 9973 Query: 445 c 445 | Sbjct: 9972 c 9972
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Plus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 34144 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 34203 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 34204 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 34263 Query: 294 gccgtcctcgagtacctggccgccgag 320 ||||||||||||||||| ||||||||| Sbjct: 34264 gccgtcctcgagtacctcgccgccgag 34290 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 384 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 34393 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 34452 Query: 385 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 444 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 34453 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 34512 Query: 445 c 445 | Sbjct: 34513 c 34513
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 7800461 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 7800520 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 7800521 cccgtcggccgtatcgggcgctacctcaagaa 7800552
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 14843 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 14902 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 14903 cccgtcggccgtatcgggcgctacctcaagaa 14934
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 112959 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 113018 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 113019 cccgtcggccgtatcgggcgctacctcaagaa 113050
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 195 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 254 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 169 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 228 Query: 255 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 314 | |||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 229 tcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgcc 288 Query: 315 gccgagct 322 |||||||| Sbjct: 289 gccgagct 296 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 aggagctcgggaggctgctggccggcgtcaccatcgcgcacggcgg 454 |||||||||||| ||| |||||||||||||||||||| |||||||| Sbjct: 383 aggagctcgggaagctactggccggcgtcaccatcgcacacggcgg 428
>gb|BT016168.1| Zea mays clone Contig1 mRNA sequence Length = 676 Score = 133 bits (67), Expect = 5e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 141 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 200 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| || ||| ||| ||||||||||| | || |||||||| |||||| || Sbjct: 201 tacctcaaggccgggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctcc 260 Query: 294 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 353 ||||| |||||||| || ||||||||| || ||||||| ||||||||||| || |||| Sbjct: 261 gccgttctcgagtatctcgccgccgaggtgctggagctggccgggaacgctgctcgggac 320 Query: 354 aacaagaagtcccgcatcgtgcc 376 ||||||||| ||| |||||||| Sbjct: 321 aacaagaagaaccgtatcgtgcc 343
>gb|AY104828.1| Zea mays PCO072413 mRNA sequence Length = 741 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||||| |||||||||||||||||| | || | ||| ||||||| |||| ||| Sbjct: 120 caaggccggactccagttccccgtcggcaggattgccaggttcctcaaggcgggcaagta 179 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 |||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||| || Sbjct: 180 cgcggagcgcgtcggcgccggcgcccccgtgtacctcgccgccgtcctcgagtacctcgc 239 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 || ||| | | || || |||||||||||||| | ||||||||||||| ||||||| || Sbjct: 240 ggctgaggttctcgaacttgccgggaacgccgcgagggacaacaagaagacccgcattgt 299 Query: 374 gcc 376 ||| Sbjct: 300 gcc 302
>gb|AY105006.1| Zea mays PCO108932 mRNA sequence Length = 841 Score = 133 bits (67), Expect = 5e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 174 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 233 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 129 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 188 Query: 234 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 293 ||||||||| || ||| ||| ||||||||||| | || |||||||| |||||| || Sbjct: 189 tacctcaaggccgggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctcc 248 Query: 294 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 353 ||||| |||||||| || ||||||||| || ||||||| ||||||||||| || |||| Sbjct: 249 gccgttctcgagtatctcgccgccgaggtgctggagctggccgggaacgctgctcgggac 308 Query: 354 aacaagaagtcccgcatcgtgcc 376 ||||||||| ||| |||||||| Sbjct: 309 aacaagaagaaccgtatcgtgcc 331
>dbj|D38091.1|WHTPH2AE Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-10 Length = 691 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 147 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 206 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||||||||||||||||||||| || ||||| || || Sbjct: 207 cgccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgc 266 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| | ||||| | ||||||||||| || | ||||||||||||| |||||||||| Sbjct: 267 cgctgaggttctggagttggccgggaacgcggcgagggacaacaagaagacccgcatcgt 326 Query: 374 gcc 376 ||| Sbjct: 327 gcc 329
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 145 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 204 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||||||||||||||||||||| || ||||| || || Sbjct: 205 cgccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgc 264 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| | ||||| | ||||||||||| || | ||||||||||||| |||||||||| Sbjct: 265 cgctgaggttctggagttggccgggaacgcggcgagggacaacaagaagacccgcatcgt 324 Query: 374 gcc 376 ||| Sbjct: 325 gcc 327
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 129 bits (65), Expect = 9e-27 Identities = 176/213 (82%) Strand = Plus / Plus Query: 150 cgcaaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccag 209 ||||||| |||||| ||||||||||| ||||| | || || ||||||||||| |||||| Sbjct: 55 cgcaagggcggcggcccgaggaagaaatcggtctctcgctcagtcaaggccggcctccag 114 Query: 210 ttccccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggc 269 ||||||||||| || |||| || ||| | ||||||||| ||||||| |||| ||||| Sbjct: 115 ttccccgtcggtcgtctcggccgatacttgaagaagggcaggtacgctcagcgtgtcggt 174 Query: 270 acgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggag 329 || || || || |||||||| |||||||||||||||||||| ||||| ||| | |||||| Sbjct: 175 accggagctccggtctaccttgccgccgtcctcgagtacctagccgcagaggtattggag 234 Query: 330 ctcgccgggaacgccgccaaggacaacaagaag 362 | ||||| ||||| || | |||||||||||| Sbjct: 235 ttggccggaaacgcggcgagagacaacaagaag 267
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 20566122 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 20566181 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 20566182 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 20566241 Query: 314 cgccgag 320 ||||||| Sbjct: 20566242 cgccgag 20566248 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 170 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 229 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 11503554 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 11503500 Query: 230 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 289 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 11503499 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 11503444 Query: 290 cgccgccgtcctcgagtacctggccgc 316 ||| |||||||||| |||||| ||||| Sbjct: 11503443 cgctgccgtcctcgggtaccttgccgc 11503417 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 386 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 20566352 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 20566411 Query: 387 ctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcg 446 | ||||||||| | |||||| ||||||| | | ||||| | || |||||||||||| Sbjct: 20566412 cagctcgccgtgcgcaacgacgaggagctgtcgcgcctgctcggcgccgtcaccatcgcc 20566471 Query: 447 cacggcggc 455 |||||||| Sbjct: 20566472 aacggcggc 20566480 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 tggagctcgccgggaacgcc 344 |||||||||||||||||||| Sbjct: 17645364 tggagctcgccgggaacgcc 17645345
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 70083 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 70142 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 70143 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 70202 Query: 314 cgccgag 320 ||||||| Sbjct: 70203 cgccgag 70209 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 386 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 70313 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 70372 Query: 387 ctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcg 446 | ||||||||| | |||||| ||||||| | | ||||| | || |||||||||||| Sbjct: 70373 cagctcgccgtgcgcaacgacgaggagctgtcgcgcctgctcggcgccgtcaccatcgcc 70432 Query: 447 cacggcggc 455 |||||||| Sbjct: 70433 aacggcggc 70441
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 40494 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 40553 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 40554 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 40613 Query: 314 cgccgag 320 ||||||| Sbjct: 40614 cgccgag 40620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 386 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 40724 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 40783 Query: 387 ctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcg 446 | ||||||||| | |||||| ||||||| | | ||||| | || |||||||||||| Sbjct: 40784 cagctcgccgtgcgcaacgacgaggagctgtcgcgcctgctcggcgccgtcaccatcgcc 40843 Query: 447 cacggcggc 455 |||||||| Sbjct: 40844 aacggcggc 40852
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 119 bits (60), Expect = 8e-24 Identities = 153/184 (83%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 218 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 277 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 278 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 337 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| | | ||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 338 cgctgaggttcttgagctcgccgggaacgcggcgagggacaacaagaagacccgcatagt 397 Query: 374 gccc 377 |||| Sbjct: 398 gccc 401
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 36427 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 36485 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 ||||||||||| |||||||| ||||||||||| Sbjct: 36486 cccgtcggccgtatcgggcgctacctcaagaa 36517
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full insert sequence Length = 830 Score = 119 bits (60), Expect = 8e-24 Identities = 153/184 (83%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 218 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 277 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 278 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 337 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| | | ||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 338 cgctgaggttcttgagctcgccgggaacgcggcgagggacaacaagaagacccgcatagt 397 Query: 374 gccc 377 |||| Sbjct: 398 gccc 401
>gb|AY110108.1| Zea mays CL14299_1 mRNA sequence Length = 712 Score = 113 bits (57), Expect = 5e-22 Identities = 159/193 (82%) Strand = Plus / Minus Query: 184 cgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaaga 243 |||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 582 cgcggtcgaccaaggccgggctgcagttccccgtcggccgcatcgcgcgctacctcaagg 523 Query: 244 agggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcg 303 ||| |||||| ||||||||||| || || |||||||||||| |||||||||||| Sbjct: 522 ccggcaagtacgccgagcgcgtcggcggtggtgcgcccgtctacctctccgccgtcctcg 463 Query: 304 agtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagt 363 |||| || || || ||| ||||||| || || || ||||| || |||||||||||| Sbjct: 462 agtatctcgcggcagaggtgttggaactggcgggcaacgcggcgcgcgacaacaagaaga 403 Query: 364 cccgcatcgtgcc 376 |||||||||||| Sbjct: 402 accgcatcgtgcc 390
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 22313977 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 22313918 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 |||||| |||| |||||||| ||||||||||| Sbjct: 22313917 cccgtcagccgtatcgggcgctacctcaagaa 22313886 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 21536451 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 21536510 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 21536511 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 21536570 Query: 314 cgc 316 ||| Sbjct: 21536571 cgc 21536573 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 21539131 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 21539190 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 21539191 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 21539250 Query: 314 cgc 316 ||| Sbjct: 21539251 cgc 21539253 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||||||||||||| || | ||||||||||||| ||||||||||||| Sbjct: 21536860 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgtgcc 21536909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccc 377 ||||||||||||||||| || | ||||||||||||| ||||||| |||||| Sbjct: 21539499 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatagtgccc 21539549
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 153 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 212 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 119223 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 119164 Query: 213 cccgtcggccgcatcgggcggtacctcaagaa 244 |||||| |||| |||||||| ||||||||||| Sbjct: 119163 cccgtcagccgtatcgggcgctacctcaagaa 119132
>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and histone H2A genes, complete cds Length = 4358 Score = 111 bits (56), Expect = 2e-21 Identities = 152/184 (82%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||||| || ||||||||||| |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3860 caaggccggcctgcagttccccgttggccgcattgcgcgctacctgaagaagggcaagta 3919 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||| |||| | ||||| ||||| ||||| ||||| || || ||||||||| | Sbjct: 3920 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctggagtacctgac 3979 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| ||||||||| Sbjct: 3980 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcatcgt 4039 Query: 374 gccc 377 |||| Sbjct: 4040 gccc 4043
>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II), histone H2B (ch2b-II) and histone H2A (ch2a-II) genes, complete cds Length = 3777 Score = 103 bits (52), Expect = 5e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||||| || |||||||| || |||||||| | || ||||| ||||||||| ||| Sbjct: 3279 caaggccggcctgcagttccctgtgggccgcattgcacgctacctgaagaagggcaagta 3338 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||| |||| | ||||| ||||| ||||| ||||| || |||||||||||| | Sbjct: 3339 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctcgagtacctgac 3398 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| ||||||||| Sbjct: 3399 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcatcgt 3458 Query: 374 gccc 377 |||| Sbjct: 3459 gccc 3462
>gb|AY104826.1| Zea mays PCO099353 mRNA sequence Length = 793 Score = 101 bits (51), Expect = 2e-18 Identities = 150/183 (81%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||| ||||| ||||| ||||||||| | |||| |||| ||||||| ||| ||| Sbjct: 162 caaggctgggctgcagtttcccgtcggcaggatcgctcggttcctcaaggccggcaagta 221 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||| ||| | |||||||| ||||||||||| || |||||||||||||| || Sbjct: 222 cgccgagcgcgtgggcgccggcgcccctgtctacctcgcagctgtcctcgagtacctcgc 281 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| | ||||||| || |||||||| || | ||| ||||||||| |||||||||| Sbjct: 282 cgctgaggtcctggagcttgctgggaacgcagcgagggataacaagaagacccgcatcgt 341 Query: 374 gcc 376 ||| Sbjct: 342 gcc 344
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 48264 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 48323 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 48324 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 48383 Query: 314 cgccgag 320 ||||||| Sbjct: 48384 cgccgag 48390 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 48598 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 48649
>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV), and histone H2B (ch2b-IV) genes, complete cds Length = 4502 Score = 101 bits (51), Expect = 2e-18 Identities = 150/183 (81%) Strand = Plus / Minus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||||| || |||||||| || |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3415 caaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagta 3356 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||| |||| | ||||| ||||| ||||| |||||||| || ||||||||| | Sbjct: 3355 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgccgtgctggagtacctgac 3296 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| |||||| || Sbjct: 3295 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcattgt 3236 Query: 374 gcc 376 ||| Sbjct: 3235 gcc 3233
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 74235 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 74294 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 74295 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 74354 Query: 314 cgc 316 ||| Sbjct: 74355 cgc 74357 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 76915 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 76974 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 76975 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 77034 Query: 314 cgc 316 ||| Sbjct: 77035 cgc 77037 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||||||||||||| || | ||||||||||||| ||||||||||||| Sbjct: 74644 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgtgcc 74693 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 327 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccc 377 ||||||||||||||||| || | ||||||||||||| ||||||| |||||| Sbjct: 77283 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatagtgccc 77333
>gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-III), histone H4 (ch4-III), histone H2B (ch2b-III) and histone H2A (ch2a-III) genes, complete cds Length = 4582 Score = 87.7 bits (44), Expect = 3e-14 Identities = 149/184 (80%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||||| || |||||||| || |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3158 caaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagta 3217 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| ||||| |||| | ||||| ||||| ||||| ||||| || || ||||||||| | Sbjct: 3218 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctggagtacctgac 3277 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 ||| ||| || | ||||| ||||| ||||||||| |||||||||||| ||| ||||| Sbjct: 3278 cgctgaggtgctagagctggccggcaacgccgcccgcgacaacaagaagaaccgtatcgt 3337 Query: 374 gccc 377 |||| Sbjct: 3338 gccc 3341
>ref|XM_481315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Plus Query: 170 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 229 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 348 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 402 Query: 230 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 289 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 403 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 458 Query: 290 cgccgccgtcctcgagtacctggccgc 316 ||| |||||||||| |||||| ||||| Sbjct: 459 cgctgccgtcctcgggtaccttgccgc 485
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 170 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 229 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 57688 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 57634 Query: 230 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 289 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 57633 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 57578 Query: 290 cgccgccgtcctcgagtacctggccgc 316 ||| |||||||||| |||||| ||||| Sbjct: 57577 cgctgccgtcctcgggtaccttgccgc 57551
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 170 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 229 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 117543 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 117489 Query: 230 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 289 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 117488 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 117433 Query: 290 cgccgccgtcctcgagtacctggccgc 316 ||| |||||||||| |||||| ||||| Sbjct: 117432 cgctgccgtcctcgggtaccttgccgc 117406
>gb|AY849374.1| Emiliania huxleyi histone H2A mRNA, complete cds Length = 680 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 260 gcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 319 |||| ||||| |||| || || |||||||| |||||||||||||||||| |||| ||||| Sbjct: 120 gcgcatcggcgcgggagcgccggtctacctggccgccgtcctcgagtacatggcggccga 179 Query: 320 gctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccag 379 | || | |||||||| || |||||||| |||||||||||||| |||||| | ||| | Sbjct: 180 ggtgctcgagctcgcgggcaacgccgcgcgcgacaacaagaagtcgcgcatcattccccg 239 Query: 380 gcacctgctcctcgccgtgaggaacgaccaggagctc 416 |||| | |||||| ||| | |||||| |||||||| Sbjct: 240 gcacatcaccctcgcggtgcgcaacgacgaggagctc 276
>gb|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds Length = 2120 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 944 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 1003 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 392 ||||| || |||||| |||||||||||| |||||||| | ||| | ||||||| || Sbjct: 1004 gccggcaatgccgcccgcgacaacaagaagacccgcatcatcccccgtcacctgcagctg 1063 Query: 393 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgc 445 |||||| | |||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 1064 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggcgtcaccatcgc 1116
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 87/104 (83%), Gaps = 9/104 (8%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 7508130 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 7508180 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccg 297 ||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 7508181 tgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 7508224 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 tcgggaggctgctggccggcgtc 437 ||||||||||||||||||||||| Sbjct: 34705627 tcgggaggctgctggccggcgtc 34705649 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgca 448 ||||||||| ||||||||||||||||| Sbjct: 7508402 gctgctggctggcgtcaccatcgcgca 7508428
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 79.8 bits (40), Expect = 7e-12 Identities = 87/104 (83%), Gaps = 9/104 (8%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 30603 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 30653 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccg 297 ||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 30654 tgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 30697 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgca 448 ||||||||| ||||||||||||||||| Sbjct: 30875 gctgctggctggcgtcaccatcgcgca 30901
>gb|BC068823.1| Xenopus laevis cDNA clone IMAGE:6635737, partial cds Length = 763 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| ||||| || |||||||| ||| |||||||| | ||||| | ||||| ||| Sbjct: 501 gtctacctggccgcggtgctcgagtatctgaccgccgagatcctggagttggccggcaac 442 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || ||| ||| ||||||||| | |||||| | ||||||||||||| ||||||||| | Sbjct: 441 gctgcccgggataacaagaagactcgcatcatccccaggcacctgcagctcgccgtgcgc 382 Query: 402 aacgaccaggagctc 416 |||||| |||||||| Sbjct: 381 aacgacgaggagctc 367
>emb|X94693.1|TAH2A254 T.aestivum histone H2A gene Length = 2241 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgc 316 |||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1230 agcgcgtcggagccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgc 1287 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||| ||||| |||||||||| ||||||||||||| |||| |||||||| Sbjct: 1562 tggagctggccggaaacgccgccagggacaacaagaagacccgtatcgtgcc 1613
>emb|AJ245999.1|BNA245999 Brassica napus H2A gene for Histone H2A Length = 971 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 464 cccgtctacctcgccgccgtcctcgagtacctcgccgccgag 505
>gb|L75824.1|WHTHIH2AA Triticum aestivum histone H2A gene, complete cds Length = 2241 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgc 316 |||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1230 agcgcgtcggagccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgc 1287 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||||| ||||| |||||||||| ||||||||||||| |||| |||||||| Sbjct: 1562 tggagctggccggaaacgccgccagggacaacaagaagacccgtatcgtgcc 1613
>gb|AY108339.1| Zea mays PCO070432 mRNA sequence Length = 811 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 264 gtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctg 323 |||||| | |||||||||||||||||||| ||||| |||||||| || || || ||| | Sbjct: 243 gtcggcgccggcgcccccgtctacctcgctgccgtgctcgagtatcttgctgctgaggtt 302 Query: 324 ttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 | ||||| ||||||||||| || ||||||||||||| |||||||||| Sbjct: 303 ctcgagcttgccgggaacgcggctcgggacaacaagaagacccgcatcgt 352
>emb|CR700361.2|CNS0G3CL Tetraodon nigroviridis full-length cDNA Length = 547 Score = 73.8 bits (37), Expect = 4e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 |||| |||||| | |||||||| |||||||| || ||||| || ||||||||| |||| | Sbjct: 154 agcgtgtcggcgccggcgccccggtctacctggcggccgtgctggagtacctgaccgctg 213 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccca 378 || | ||||||| ||||||||||||||| |||||||||||| || | ||| | || Sbjct: 214 agatcctggagctggccgggaacgccgcccgcgacaacaagaagaccaggatcatcccgc 273 Query: 379 ggcacctgctcctcgccgtgaggaacgaccaggagct 415 ||||||||| || |||||| | |||||| ||||||| Sbjct: 274 ggcacctgcagctggccgtgcgcaacgacgaggagct 310
>emb|CR709561.2|CNS0GAG5 Tetraodon nigroviridis full-length cDNA Length = 613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||| |||||| | || || ||||||||||| || |||||||| ||||| ||| Sbjct: 171 tacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcctggagtatctg 230 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 |||||||| | ||||| | ||||| |||||||| | |||||||||||| |||||||| Sbjct: 231 accgccgagatcctggagttggccggcaacgccgcaagagacaacaagaagacccgcatc 290
>gb|BC077427.1| Xenopus laevis MGC82198 protein, mRNA (cDNA clone MGC:82198 IMAGE:3402168), complete cds Length = 1591 Score = 69.9 bits (35), Expect = 7e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| |||||||| || |||||||||||| |||| ||| | ||||| | ||||| ||| Sbjct: 156 gtctatctcgccgcagtgctcgagtacctgaccgctgagatcctggagttggccggcaac 215 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || ||| ||| ||||||||| |||||||| | ||||||||||||| ||||| ||| | Sbjct: 216 gctgcccgggataacaagaagacccgcatcatccccaggcacctgcagctcgctgtgcgc 275 Query: 402 aacgaccaggagctc 416 ||||| |||||||| Sbjct: 276 aacgatgaggagctc 290
>emb|X73147.1|EGHH2A E.gracilis mRNA for histone H2A Length = 522 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 246 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 305 ||||||||||| ||||| || || | ||||||||| || ||||| || ||||| || ||| Sbjct: 181 ggccggtacgccaagcgggtggggaagggcgccccggtgtacctggcggccgtgctggag 240 Query: 306 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 |||||| |||| |||||| ||||||| || || |||||| | ||||||||||||| Sbjct: 241 tacctgtccgcggagctgctggagctggcgggcaacgcctcgcgggacaacaagaag 297
>gb|U70133.1|BBU70133 Bufo bufo gagarizans replication-dependent histone H2A mRNA, complete cds Length = 466 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 160 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 219 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 392 ||||| || |||||| |||||||||||| | |||||| | ||| | ||||||| || Sbjct: 220 gccggcaatgccgcccgcgacaacaagaagactcgcatcatcccccgtcacctgcagctg 279 Query: 393 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgc 445 |||||| | |||||| |||||||| | |||||||| ||| ||||||||||| Sbjct: 280 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggagtcaccatcgc 332
>gb|BC106331.1| Xenopus laevis cDNA clone MGC:130860 IMAGE:7205580, complete cds Length = 799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 160 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 219 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 220 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 279 Query: 402 aacgaccaggagctc 416 |||||| |||||||| Sbjct: 280 aacgacgaggagctc 294
>ref|XM_752558.1| Ustilago maydis 521 histone H2A (UM01504.1) partial mRNA Length = 411 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||||||||||||||| |||||||||||||| |||||| | | || || ||||| ||| Sbjct: 157 gtctacctcgccgccgttctcgagtacctggctgccgagattcttgaacttgccggtaac 216 Query: 342 gccgccaaggacaacaagaagtc 364 || ||| |||||||||||||| Sbjct: 217 gctgcccgtgacaacaagaagtc 239 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 189 tcggtcaaggccgggctccagttccccgtcgg 220 |||| |||||| || ||||||||||||||||| Sbjct: 64 tcggccaaggctggtctccagttccccgtcgg 95
>emb|CR705345.2|CNS0G771 Tetraodon nigroviridis full-length cDNA Length = 1250 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||| |||||| | || || ||||||||||| || |||||||| ||||| ||| Sbjct: 172 tacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcctggagtatctg 231 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcat 370 |||||||| | ||||| | ||||| |||||||| | ||||||||| || ||||||| Sbjct: 232 accgccgagatcctggagttggccggcaacgccgcaagagacaacaaggagacccgcat 290
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 4519 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 4578 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 4579 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 4638 Query: 402 aacgaccaggagctc 416 |||||| |||||||| Sbjct: 4639 aacgacgaggagctc 4653
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 4536 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 4595 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 4596 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 4655 Query: 402 aacgaccaggagctc 416 |||||| |||||||| Sbjct: 4656 aacgacgaggagctc 4670
>gb|M11085.1|SUPHIS2A2 Sea urchin (P.miliaris) late histone H2A-2 late mRNA, complete cds Length = 430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 154 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 213 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||||||| |||||||||||| Sbjct: 214 ggcaacgccgcccgcgacaacaagaag 240
>gb|M14140.1|SUPH2B2 P.miliaris histone H2A-2.1 gene, complete cds Length = 375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>gb|M14141.1|SUPH2A2 P.miliaris histone H2A-2.2 gene, complete cds Length = 375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880 mRNA, complete cds Length = 725 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 274 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 333 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 334 gcagcaagggataacaagaag 354
>gb|AY389710.1| Hyacinthus orientalis histone H2A mRNA, partial cds Length = 677 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || ||||||||||||||| | |||||||| ||||| ||| | |||||||| || Sbjct: 233 gccccggtgtacctcgccgccgtcttggagtacctcgccgctgaggtcttggagcttgct 292 Query: 336 gggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 376 ||||| || || | |||||||||||| || | |||||||| Sbjct: 293 gggaatgctgcgagagacaacaagaagaccaggatcgtgcc 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccg 223 |||||||||||| ||||||||||||||||| Sbjct: 151 caaggccgggctacagttccccgtcggccg 180
>emb|AJ494849.1|ODI494849 Oikopleura dioica H2A.3 gene for histone h2A.3 Length = 1250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||||||||| || || ||||||||| |||| ||| ||| ||||||||||| ||| Sbjct: 245 gtctacctcgccgcagtgcttgagtacctgaccgctgaggtgtgcgagctcgccggaaac 304 Query: 342 gccgccaaggacaacaagaag 362 || ||| |||||||||||| Sbjct: 305 gctgcccgcgacaacaagaag 325
>gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 429 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 169 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 228 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 229 gcagcaagggataacaagaag 249
>gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 271 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 330 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 331 gcagcaagggataacaagaag 351
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 58.0 bits (29), Expect = 3e-05 Identities = 145/183 (79%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 1366 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 1425 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 392 ||||| || |||||| |||||||||| |||||||| | ||| | ||||||| || Sbjct: 1426 gccggcaatgccgcccgcgacaacaaga---cccgcatcatcccccgtcacctgcagctg 1482 Query: 393 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggc 452 |||||| | |||||| |||||||| | |||||||| ||| ||||||||||| || ||| Sbjct: 1483 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggagtcaccatcgcccagggc 1542 Query: 453 ggc 455 ||| Sbjct: 1543 ggc 1545
>emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 242 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 301 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 302 gcagcaagggataacaagaag 322
>emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 237 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 296 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 297 gcagcaagggataacaagaag 317
>gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, complete sequence Length = 728 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 278 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 337 Query: 342 gccgccaaggacaacaagaag 362 || || | ||| ||||||||| Sbjct: 338 gcagcaagggataacaagaag 358
>ref|XM_391803.1| Gibberella zeae PH-1 H2A_NEUCR Histone H2A (FG11627.1) partial mRNA Length = 405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacct 310 |||||||||||||| ||||||||||||||||| Sbjct: 151 cccgtctacctcgctgccgtcctcgagtacct 182
>emb|CR722682.2|CNS0GKKG Tetraodon nigroviridis full-length cDNA Length = 824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 173 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 232 Query: 339 aacgccgccaaggacaacaagaag 362 ||||||||| |||||||||||| Sbjct: 233 aacgccgcccgcgacaacaagaag 256
>emb|CR673736.2|CNS0FITQ Tetraodon nigroviridis full-length cDNA Length = 767 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 132 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 191 Query: 339 aacgccgccaaggacaacaagaag 362 ||||||||| |||||||||||| Sbjct: 192 aacgccgcccgcgacaacaagaag 215
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| |||||||| || ||||||||| |||||||| | ||||||| ||||| ||| Sbjct: 187 gtctacctggccgccgtgctggagtacctgaccgccgagatcctggagctggccggcaac 246 Query: 342 gccgccaaggacaacaagaa 361 || ||| ||||||||||| Sbjct: 247 gctgcccgcgacaacaagaa 266 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccg 223 ||||||||||||||||||||||||||| Sbjct: 102 ggccgggctccagttccccgtcggccg 128
>emb|CR659269.2|CNS0F7NV Tetraodon nigroviridis full-length cDNA Length = 805 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 171 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 230 Query: 339 aacgccgccaaggacaacaagaag 362 ||||||||| |||||||||||| Sbjct: 231 aacgccgcccgcgacaacaagaag 254
>gb|BC060324.1| Homo sapiens histone 2, H2ac, mRNA (cDNA clone MGC:74460 IMAGE:3892650), complete cds Length = 446 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 174 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 233 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 234 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 272
>ref|NM_003517.2| Homo sapiens histone 2, H2ac (HIST2H2AC), mRNA Length = 437 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|AY648852.1| Homo sapiens histone H2A/r gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 512 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 571 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 572 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 610
>ref|XM_954349.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 319 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 145 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>ref|XM_331212.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 319 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 145 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>ref|XM_569065.1| Cryptococcus neoformans var. neoformans JEC21 histone H2A-1 (CNB00550) partial mRNA Length = 544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 |||||||||||||| |||||||| |||||||| ||||| || | | ||| | ||||| Sbjct: 205 cccgtctacctcgctgccgtccttgagtaccttgccgctgaaatcctcgagttggccggt 264 Query: 339 aacgccgccaaggacaacaagaagtcccgcatcgt 373 ||||| ||| ||||||||||||||||| ||||| Sbjct: 265 aacgctgcccgagacaacaagaagtcccgtatcgt 299
>emb|AL591493.14| Human DNA sequence from clone RP11-196G18 on chromosome 1 Contains a ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1) pseudogene, the FCGR1A gene for Fc fragment of IgG, high affinity Ia, receptor for (CD64), a novel gene similar to histone 2, H2be (HIST2H2BE), a novel gene similar to histone 2, H3c (HIST2H3C), the HIST2H4 gene for histone 2, H4, the HIST2H3C gene for histone 2, H3c, the HIST2H2AA gene for histone 2, H2aa, a histone 2, H2bd pseudogene (HIST2H2BD), a histone 2, H2bc pseudogene (HIST2H2BC), a novel gene similar to histone 2, H2aa (HIST2H2AA), a novel gene similar to histone 2, H3c (HIST2H3C), a novel gene similar to histone 1, H4 (HIST2H4), the HIST2H2BE gene for histone 2, H2be, the HIST2H2AC gene for histone 2, H2ac, the HIST2H2AB gene for histone 2, H2ab, a novel protein similar to histone 2, a novel gene, the SV2A gene for synaptic vesicle glycoprotein 2A, the 3' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa and five CpG islands, complete sequence Length = 188956 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 148823 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 148882 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 148883 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 148921 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 112979 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 113038 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 113039 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 113077 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Minus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 104287 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 104228 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 104227 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 104189 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||| ||||| | |||||||| || ||||| || || ||||||||||||||| Sbjct: 149509 tacgcggagcgggtcggggcaggcgccccggtgtacctggcggcggtcctcgagtacctg 149450 Query: 312 gccgc 316 |||| Sbjct: 149449 accgc 149445
>ref|XM_962318.1| PREDICTED: Tribolium castaneum similar to H2A histone family, member X (LOC655756), mRNA Length = 545 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 |||||||| ||||| |||||||| | ||||||||||| || ||| || ||||| | ||| Sbjct: 195 gcccccgtgtacctggccgccgttatggagtacctggctgctgaggtgctggagttggcc 254 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||| || | ||||||||||||| Sbjct: 255 ggaaacgctgctagggacaacaagaag 281
>gb|AY062171.1| Neurospora crassa histone H2A (hh2A) and histone H2B (hh2B) genes, complete cds Length = 6309 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 319 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 827 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 781
>ref|XM_344599.2| PREDICTED: Rattus norvegicus histone 1, H2ao (predicted) (Hist1h2ao_predicted), mRNA Length = 483 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcttggagctc 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || | ||||||||| ||| | |||||| Sbjct: 199 gcaggcaacgcggcgagggacaacaaaaagacacgcatc 237
>gb|AY131973.1| Homo sapiens histone H2A (HIST2H2AC) gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 512 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 571 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 572 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 610
>gb|M11084.1|SUPHIS2A1 Sea urchin (P.miliaris) late histone H2A-1 late mRNA, complete cds Length = 465 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || |||||||| ||||| ||||||||||| |||| ||| | | ||||||||| Sbjct: 180 gccccagtgtacctcgcagccgtactcgagtacctcaccgctgagatcctcgagctcgcc 239 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||||||| |||||||||||| Sbjct: 240 ggcaacgccgcccgcgacaacaagaag 266
>ref|NM_001030332.2| Xenopus tropicalis hypothetical protein LOC594922 (LOC594922), mRNA Length = 519 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 162 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 221 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 222 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>ref|NM_001030325.2| Xenopus tropicalis hypothetical protein LOC594911 (LOC594911), mRNA Length = 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 153 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 212 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 258
>gb|BC074601.1| Xenopus tropicalis MGC69325 protein, mRNA (cDNA clone MGC:69325 IMAGE:5308897), complete cds Length = 1495 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 164 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 223 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 224 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 269
>gb|AF517874.1| Griffithsia japonica isolate Gj10 histone protein mRNA, partial cds Length = 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 137/174 (78%) Strand = Plus / Plus Query: 194 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 253 |||||||||||| |||||||| ||||| || |||| || | |||| |||||| | || Sbjct: 134 caaggccgggctgcagttcccggtcggtcgtatcgaccgcttcctccgcaagggcggcta 193 Query: 254 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||| | ||||| ||| | |||||||| || || | ||||||||| | |||||| || | Sbjct: 194 cgccgaccgcgtgggcgccggcgcccctgtgtatatggccgccgtcatggagtacttgac 253 Query: 314 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccg 367 |||||| || | ||||||||||| ||||||||| || |||||||||||||| Sbjct: 254 ggccgaggtgctcgagctcgccggcaacgccgcccgcgataacaagaagtcccg 307
>ref|NM_001004821.1| Xenopus tropicalis MGC69325 protein (MGC69325), mRNA Length = 1495 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 164 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 223 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 224 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 269
>ref|XM_314447.2| Anopheles gambiae str. PEST ENSANGP00000016040 (ENSANGG00000013551), partial mRNA Length = 375 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||||||||| ||||||| |||||||| || ||||| ||| | ||||||||| Sbjct: 115 tacgcggagcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctg 174 Query: 312 gc 313 || Sbjct: 175 gc 176
>ref|XM_306256.1| Anopheles gambiae str. PEST ENSANGP00000000004 (ENSANGG00000000004), mRNA Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||||||||| ||||||| |||||||| || ||||| ||| | ||||||||| Sbjct: 229 tacgcggagcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctg 288 Query: 312 gc 313 || Sbjct: 289 gc 290
>emb|CR762147.2| Xenopus tropicalis finished cDNA, clone TGas072e19 Length = 519 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 162 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 221 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 222 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>emb|CR761789.2| Xenopus tropicalis finished cDNA, clone TGas125k04 Length = 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 153 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 212 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 258
>ref|XM_525084.1| PREDICTED: Pan troglodytes similar to Histone H2A.1 (LOC469700), mRNA Length = 393 Score = 50.1 bits (25), Expect = 0.006 Identities = 70/85 (82%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| ||||| || ||||| || |||||||||||| | |||| Sbjct: 125 agcgcgtgggcgccggcgccccggtctatctggccgcggtgctcgagtacctgactgccg 184 Query: 319 agctgttggagctcgccgggaacgc 343 || | ||||||| ||||| ||||| Sbjct: 185 agatcctggagcttgccggcaacgc 209
>gb|BC031333.1| Homo sapiens histone 1, H3d, mRNA (cDNA clone MGC:45668 IMAGE:3608479), complete cds Length = 890 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 138 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 197 Query: 363 tcccgcatc 371 |||||||| Sbjct: 198 acccgcatc 206
>ref|NG_001335.1| Homo sapiens genomic large histone family cluster (HFL@) on chromosome 6 Length = 269712 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 183075 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 183016 Query: 363 tcccgcatc 371 |||||||| Sbjct: 183015 acccgcatc 183007
>ref|NM_003530.3| Homo sapiens histone 1, H3d (HIST1H3D), mRNA Length = 864 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 162 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 221 Query: 363 tcccgcatc 371 |||||||| Sbjct: 222 acccgcatc 230
>ref|NM_021065.2| Homo sapiens histone 1, H2ad (HIST1H2AD), mRNA Length = 460 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 363 tcccgcatc 371 |||||||| Sbjct: 229 acccgcatc 237
>ref|XM_978296.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 1 (LOC665433), mRNA Length = 467 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 159 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 218 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 219 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 271
>emb|CR681249.2|CNS0FOLP Tetraodon nigroviridis full-length cDNA Length = 821 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 |||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| ||| Sbjct: 173 gtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggcaac 232 Query: 342 gccgccaaggacaacaagaag 362 |||||| |||||||||||| Sbjct: 233 gccgcccgcgacaacaagaag 253
>ref|XM_789645.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC590023), mRNA Length = 392 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 294 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 353 ||||| |||||||||||| |||||||| | | |||||||| || ||||||||| ||| Sbjct: 157 gccgtactcgagtacctgaccgccgagatcctcgagctcgcaggcaacgccgcccgcgac 216 Query: 354 aacaagaag 362 ||||||||| Sbjct: 217 aacaagaag 225
>emb|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2 Contains seventeen histone (pseudo)genes and gene RPS10P1 (40S Ribosomal protein S10 pseudogene 1), three CpG islands, ESTs, STSs and GSSs, complete sequence Length = 89301 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 4457 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 4398 Query: 363 tcccgcatc 371 |||||||| Sbjct: 4397 acccgcatc 4389
>emb|Z80776.1|HSH2AG H.sapiens H2A/g gene Length = 840 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 367 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 426 Query: 363 tcccgcatc 371 |||||||| Sbjct: 427 acccgcatc 435
>emb|X16495.1|MMHIST2A Murine H2A gene for histone H2A Length = 470 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 172 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 231 Query: 363 tcccgcatc 371 |||||||| Sbjct: 232 acccgcatc 240
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 164208 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 164149 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 164148 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 164096 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 51590 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 51531 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 51530 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 51478
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 33518 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 33459 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 33458 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 33406 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 10758 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 10817 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 10818 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 10870
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 60159 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 60100 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 60099 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 60047 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 52784 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 52725 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 52724 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 52672
>emb|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene Length = 5705 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 276 gcccccgtctacctcgccgccgtcctcga 304 ||||||||||||||||||||||| ||||| Sbjct: 3366 gcccccgtctacctcgccgccgtactcga 3338 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ctccagttccccgtcggccg 223 |||||||||||||||||||| Sbjct: 3438 ctccagttccccgtcggccg 3419
>gb|BC065803.1| Mus musculus histone 1, H2ag, mRNA (cDNA clone MGC:73771 IMAGE:1263745), complete cds Length = 527 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 147 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 206 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 207 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 259
>gb|BC093807.1| Homo sapiens histone 1, H2ad, mRNA (cDNA clone MGC:120842 IMAGE:7939652), complete cds Length = 467 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 208 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 267 Query: 363 tcccgcatc 371 |||||||| Sbjct: 268 acccgcatc 276
>gb|AF493985.1| Triticum aestivum H2A-1 gene, partial sequence Length = 538 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 422 gctgctggccggcgtcaccatcgcgcacggcgg 454 |||||| ||||||||||||||||| |||||||| Sbjct: 336 gctgctcgccggcgtcaccatcgcccacggcgg 304
>dbj|AK145443.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0045N09 product:histone 1, H2ad, full insert sequence Length = 446 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 158 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 217 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 218 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 270
>emb|CR541999.1| Homo sapiens full open reading frame cDNA clone RZPDo834C1135D for gene HIST1H3D, histone 1, H3d; complete cds, without stopcodon Length = 390 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 363 tcccgcatc 371 |||||||| Sbjct: 229 acccgcatc 237
>emb|CR541970.1| Homo sapiens full open reading frame cDNA clone RZPDo834G1134D for gene HIST1H3D, histone 1, H3d; complete cds, incl. stopcodon Length = 393 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 363 tcccgcatc 371 |||||||| Sbjct: 229 acccgcatc 237
>ref|NM_178186.2| Mus musculus histone 1, H2ag (Hist1h2ag), mRNA Length = 527 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 147 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 206 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 207 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 259
>gb|BC093809.1| Homo sapiens histone 1, H2ad, mRNA (cDNA clone MGC:120844 IMAGE:7939654), complete cds Length = 473 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 211 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 270 Query: 363 tcccgcatc 371 |||||||| Sbjct: 271 acccgcatc 279
>gb|AY158937.1| Mus musculus histone protein Hist1h2bc gene, complete cds Length = 1401 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 145 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 86 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 85 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 33
>gb|M31922.1|VVCH4AB V.carteri histone H2A-IV and H2B-IV genes, complete cds Length = 2132 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Minus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||||||||||||||| ||||| || || ||||||||| | || ||| | ||||||| Sbjct: 692 ggcgcccccgtctacctggccgctgtgctggagtacctgactgctgaggttctggagctg 633 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgt 373 || || ||||| ||| |||||||||||| ||||||||| Sbjct: 632 gctggcaacgcggcccgcgacaacaagaagaaccgcatcgt 592
>gb|AY131985.1| Homo sapiens histone H2A (HIST1H2AD) gene, complete cds Length = 1119 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 542 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 601 Query: 363 tcccgcatc 371 |||||||| Sbjct: 602 acccgcatc 610
>ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670 mRNA, complete cds Length = 774 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 271 tacctcgccgccgttctcgaatacctagccgccgag 306
>ref|NM_120334.2| Arabidopsis thaliana DNA binding AT5G02560 mRNA, complete cds Length = 667 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 256 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 204 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 255
>gb|BT025612.1| Arabidopsis thaliana At5g02560 mRNA, complete cds Length = 462 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 256 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 149 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 200
>ref|NM_177688.2| Mus musculus H2A histone family, member J (H2afj), mRNA Length = 1754 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 135 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 194 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 195 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 254
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Minus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 108826 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 108767 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 108766 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 108707
>emb|CR705936.2|CNS0G7NG Tetraodon nigroviridis full-length cDNA Length = 786 Score = 48.1 bits (24), Expect = 0.025 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 338 ||||||||||| || || ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 172 cccgtctacctggctgcggtccttgaatacctgaccgccgagatcctggagttggccggc 231 Query: 339 aacgccgccaaggacaacaagaag 362 ||||||||| |||||||||||| Sbjct: 232 aacgccgcccgcgacaacaagaag 255
>ref|XM_792460.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31618-PA (LOC592962), mRNA Length = 411 Score = 48.1 bits (24), Expect = 0.025 Identities = 78/96 (81%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| |||||||| || ||||| ||||||||| |||| || ||| | | ||||| || Sbjct: 142 gccccagtctacctggctgccgtgctcgagtacttggcagctgagatcctcgagctggct 201 Query: 336 gggaacgccgccaaggacaacaagaagtcccgcatc 371 || |||||||| ||||||||||||||||||||| Sbjct: 202 ggcaacgccgcacgcgacaacaagaagtcccgcatc 237
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project) Length = 96424 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 256 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 56515 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 56566
>emb|AJ494853.1|ODI494853 Oikopleura dioica mRNA for histone H2A.1a (H2A.1a gene) Length = 509 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcga 304 ||||| || ||||||||||||||||||||||| Sbjct: 141 ggcgcaccagtctacctcgccgccgtcctcga 172
>gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 453 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 181 tacctcgccgccgttctcgaatacctagccgccgag 216
>gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 759 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 270 tacctcgccgccgttctcgaatacctagccgccgag 305
>dbj|AK053755.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307C13 product:HISTONE H2A homolog [Gallus gallus], full insert sequence Length = 1754 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 135 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 194 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 195 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 254
>emb|BX833753.1|CNS09Z4Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 636 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 256 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 182 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 233
>gb|AY085515.1| Arabidopsis thaliana clone 1553 mRNA, complete sequence Length = 630 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 256 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 204 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 255
>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome V, complete sequence Length = 93672 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 13438 tacctcgccgccgttctcgaatacctagccgccgag 13403
>gb|AY104637.1| Zea mays PCO070433 mRNA sequence Length = 767 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 gtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 307 |||||| | |||||||| ||||||||||| ||||| |||||||| Sbjct: 243 gtcggcgccggcgcccctgtctacctcgctgccgtgctcgagta 286
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 102472 tacctcgccgccgttctcgaatacctagccgccgag 102437
>gb|BC099606.1| Mus musculus H2A histone family, member J, mRNA (cDNA clone MGC:118637 IMAGE:1383389), complete cds Length = 587 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 192 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 251 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 252 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 311
>gb|J00950.1|NVIHIS2A Newt histone H2a gene, partial Length = 96 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 350 ggacaacaagaagtcccgcatcgtgcccaggcacct 385 ||||||||||||| |||||||| | ||||||||||| Sbjct: 18 ggacaacaagaagacccgcatcatccccaggcacct 53
>ref|XM_474362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1617 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 tcgggaggctgctggccggcgtc 437 ||||||||||||||||||||||| Sbjct: 467 tcgggaggctgctggccggcgtc 489
>gb|DQ215051.1| Taeniopygia guttata clone 0061P0027A01 H2A histone family member V variant 1-like mRNA, complete sequence Length = 707 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgcatc 227 ||||||||| |||||||| |||||||||||| Sbjct: 119 ggccgggctgcagttcccagtcggccgcatc 149
>gb|DQ215050.1| Taeniopygia guttata clone 0058P0007H05 H2A histone family member V variant 1-like mRNA, complete sequence Length = 701 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgcatc 227 ||||||||| |||||||| |||||||||||| Sbjct: 113 ggccgggctgcagttcccagtcggccgcatc 143
>gb|DQ215047.1| Taeniopygia guttata clone 0058P0026B08 H2A histone family member V variant 1-like mRNA, complete sequence Length = 729 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgcatc 227 ||||||||| |||||||| |||||||||||| Sbjct: 141 ggccgggctgcagttcccagtcggccgcatc 171
>gb|DQ215046.1| Taeniopygia guttata clone 0058P0036G12 H2A histone family member V variant 1-like mRNA, complete sequence Length = 661 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgcatc 227 ||||||||| |||||||| |||||||||||| Sbjct: 60 ggccgggctgcagttcccagtcggccgcatc 90
>ref|XM_513764.1| PREDICTED: Pan troglodytes LOC457261 (LOC457261), mRNA Length = 789 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 544 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 603 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 604 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 642
>gb|BC019308.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:4205 IMAGE:2823572), complete cds Length = 567 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 177 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 236 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 237 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 275
>gb|BC001629.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:2238 IMAGE:3536984), complete cds Length = 567 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 177 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 236 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 237 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 275
>ref|XM_607721.2| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC529277), mRNA Length = 522 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccg 223 ||||||||||||||||||||| ||||| Sbjct: 64 ggccgggctccagttccccgtaggccg 90
>ref|XM_868899.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616790), mRNA Length = 413 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccg 223 ||||||||||||||||||||| ||||| Sbjct: 83 ggccgggctccagttccccgtaggccg 109
>ref|XM_865976.1| PREDICTED: Bos taurus similar to Histone H2A.g (H2A/g) (H2A.3) (LOC614970), mRNA Length = 447 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccg 223 ||||||||||||||||||||| ||||| Sbjct: 63 ggccgggctccagttccccgtgggccg 89 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| | |||||| | || ||||| || || ||||| ||| ||||||||||||| Sbjct: 169 gagtacctgacagccgagatcttagagctggcgggcaacgcagcccgggacaacaagaag 228 Query: 363 tcccgcatc 371 |||||||| Sbjct: 229 acccgcatc 237
>ref|NM_003516.2| Homo sapiens histone 2, H2aa (HIST2H2AA), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 192 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 251 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 252 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 290
>emb|CT025304.2| Xenopus tropicalis finished cDNA, clone TNeu074k04 Length = 550 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 ||||||||||| ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gccgggaacgctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>ref|XM_761869.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_397_9413_9787) partial mRNA Length = 375 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgag 305 |||||||||||||| |||||||||||| Sbjct: 136 cccgtctacctcgcggccgtcctcgag 162
>ref|XM_766102.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_12_46633_46109) partial mRNA Length = 525 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 279 cccgtctacctcgccgccgtcctcgag 305 |||||||||||||| |||||||||||| Sbjct: 222 cccgtctacctcgcggccgtcctcgag 196
>ref|XM_766103.1| Giardia lamblia ATCC 50803 histone H2A (GLP_12_46277_46651) partial mRNA Length = 375 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgag 305 |||||||||||||| |||||||||||| Sbjct: 136 cccgtctacctcgcggccgtcctcgag 162
>ref|XM_758864.1| Theileria parva strain Muguga chromosome 4 histone H2A (TP04_0322) partial mRNA Length = 384 Score = 46.1 bits (23), Expect = 0.099 Identities = 65/79 (82%) Strand = Plus / Plus Query: 232 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 291 ||||||| ||||| ||| ||||||| || ||||| || | ||||| ||||| ||| | | Sbjct: 101 ggtaccttaagaacggcaggtacgcaaaacgcgttggtgctggcgcacccgtttacttag 160 Query: 292 ccgccgtcctcgagtacct 310 ||||||| ||||||||||| Sbjct: 161 ccgccgtactcgagtacct 179
>ref|XM_785689.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC585884), partial mRNA Length = 366 Score = 46.1 bits (23), Expect = 0.099 Identities = 71/87 (81%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 335 ||||| || |||||| | ||||| |||||||||||| |||| ||| | | |||||||| Sbjct: 139 gccccagtgtacctctctgccgtactcgagtacctgaccgctgagatcctcgagctcgct 198 Query: 336 gggaacgccgccaaggacaacaagaag 362 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>gb|AF517875.1| Griffithsia japonica isolate Gj43 histone H2A protein mRNA, complete cds Length = 531 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 198 gccgggctccagttccccgtcggccgcatcg 228 ||||| |||||||||||||||||||| |||| Sbjct: 94 gccggtctccagttccccgtcggccgtatcg 124
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 tcgggaggctgctggccggcgtc 437 ||||||||||||||||||||||| Sbjct: 11189 tcgggaggctgctggccggcgtc 11211
>ref|XM_928387.1| PREDICTED: Homo sapiens similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC653610), mRNA Length = 962 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 346 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 405 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 406 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 444
>emb|CR541872.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0133D for gene HIST2H2AA, histone 2, H2aa; complete cds, without stopcodon Length = 390 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>emb|CR536525.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0422D for gene HIST2H2AA, histone 2, H2aa; complete cds, incl. stopcodon Length = 393 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>dbj|AB168678.1| Macaca fascicularis testis cDNA clone: QtsA-14092, similar to human histone 2, H2aa (HIST2H2AA), mRNA, RefSeq: NM_003516.2 Length = 778 Score = 46.1 bits (23), Expect = 0.099 Identities = 62/75 (82%) Strand = Plus / Plus Query: 297 gtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaac 356 ||||||||||||||| |||||||| | ||||||| || || ||||| || ||||||| Sbjct: 362 gtcctcgagtacctgaccgccgagatcctggagctggcgggcaacgcggctcgggacaac 421 Query: 357 aagaagtcccgcatc 371 |||||| | |||||| Sbjct: 422 aagaagacgcgcatc 436
>gb|BC092032.1| Xenopus laevis hypothetical protein MGC83508, mRNA (cDNA clone MGC:84952 IMAGE:6323734), complete cds Length = 1415 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 387 ||||| ||||| ||| ||||||||||||| |||||||| | ||| ||||||||| Sbjct: 255 gccggaaacgctgcccgggacaacaagaagacccgcatcatcccccggcacctgc 309 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgc 224 |||||| |||||||||||||| |||||| Sbjct: 119 ggccggactccagttccccgtaggccgc 146
>ref|XM_577577.1| PREDICTED: Rattus norvegicus similar to Histone H2A.1 (LOC502129), mRNA Length = 393 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || | ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcagcgagggacaacaagaagacgcgcatc 237
>ref|XM_225386.2| PREDICTED: Rattus norvegicus histone 1, H2an (predicted) (Hist1h2an_predicted), mRNA Length = 546 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || | ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcagcgagggacaacaagaagacgcgcatc 237
>gb|AF139873.1|AF139873 Giardia intestinalis histone H2A gene, complete cds Length = 1682 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 279 cccgtctacctcgccgccgtcctcgag 305 |||||||||||||| |||||||||||| Sbjct: 1120 cccgtctacctcgcggccgtcctcgag 1146
>gb|AY063460.1| Helianthus tuberosus cyclin D1 (CycD1;1) mRNA, complete cds Length = 1788 Score = 46.1 bits (23), Expect = 0.099 Identities = 47/55 (85%) Strand = Plus / Plus Query: 166 cgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcgg 220 ||||||||||||| || || ||| ||||| ||||| ||||||||||||||||| Sbjct: 1250 cgaggaagaagtccgtcacaaagtccgtcaaagccggtctccagttccccgtcgg 1304
>gb|AY894055.1| Synthetic construct Homo sapiens clone FLH131281.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|AY894054.1| Synthetic construct Homo sapiens clone FLH130836.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|BC098171.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120084 IMAGE:40021706), complete cds Length = 480 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|BC096739.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120085 IMAGE:40021707), complete cds Length = 480 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 tcgggaggctgctggccggcgtc 437 ||||||||||||||||||||||| Sbjct: 48652 tcgggaggctgctggccggcgtc 48674
>gb|AF007101.1|AF007101 Streptomyces hygroscopicus putative pteridine-dependent dioxygenase, PKS modules 1,2,3 and 4, and putative regulatory protein genes, complete cds and putative hydroxylase gene, partial cds Length = 32870 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 acctggccgccgagctgttggagctcg 333 |||||| |||||||||||||||||||| Sbjct: 8493 acctgggcgccgagctgttggagctcg 8467
>gb|L19779.1|HUMH2A2A Homo sapiens histone H2A.2 mRNA, complete cds Length = 564 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 192 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 251 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 252 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 290
>gb|J00980.1|XELHIS2AL xenopus laevis h2a histone gene & flanks Length = 748 Score = 46.1 bits (23), Expect = 0.099 Identities = 107/135 (79%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 341 ||||| || ||||| || |||||||| ||| |||| ||| | |||||| | ||||| ||| Sbjct: 303 gtctatctggccgcagtgctcgagtatctgaccgctgagatcttggagttggccggcaac 362 Query: 342 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 401 || || ||| ||||| ||| |||||||| | ||||||||||||| ||||| ||| | Sbjct: 363 gctgctcgggataacaaaaagacccgcatcatccccaggcacctgcagctcgctgtgcgc 422 Query: 402 aacgaccaggagctc 416 ||||| |||||||| Sbjct: 423 aacgatgaggagctc 437
>gb|AY131971.1| Homo sapiens histone H2A (HIST2H2AA) gene, complete cds Length = 1173 Score = 46.1 bits (23), Expect = 0.099 Identities = 80/99 (80%) Strand = Plus / Plus Query: 273 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 332 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 530 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 589 Query: 333 gccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || || ||||| || ||||||||||||| | |||||| Sbjct: 590 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 628
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 283 tctacctcgccgccgtcctcgagtacctggccgccgag 320 |||||||||||||||| ||||| || || ||||||||| Sbjct: 76229 tctacctcgccgccgttctcgaatatctcgccgccgag 76266
>gb|BC010336.1| Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:11561 IMAGE:3156946), complete cds Length = 1414 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 335 gctgctgggcggcgtgaccatcgcgcagggcggc 368
>ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 1 (LOC484939), mRNA Length = 1914 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 agggcgcggcgggccgcaaggc 157 |||||||||||||||||||||| Sbjct: 208 agggcgcggcgggccgcaaggc 229
>ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 2 (LOC484939), mRNA Length = 2233 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 agggcgcggcgggccgcaaggc 157 |||||||||||||||||||||| Sbjct: 208 agggcgcggcgggccgcaaggc 229
>gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosome 9, complete sequence Length = 185902 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 149726 gctgctgggcggcgtgaccatcgcgcagggcggc 149693
>ref|NM_010436.2| Mus musculus H2A histone family, member X (H2afx), mRNA Length = 1414 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 335 gctgctgggcggcgtgaccatcgcgcagggcggc 368
>emb|Z35401.1|MMHISTH2A M.musculus C3H gene for histone H2A.X Length = 2166 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 914 gctgctgggcggcgtgaccatcgcgcagggcggc 947
>emb|X58069.1|MMH2AX Mouse mRNA for Histone H2A.X Length = 1359 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 339 gctgctgggcggcgtgaccatcgcgcagggcggc 372
>emb|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes Length = 2597 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 gccgggctccagttccccgtcggccg 223 |||||||||||||||||||| ||||| Sbjct: 427 gccgggctccagttccccgtgggccg 452
>emb|AJ010974.1|LLO010974 Lilium longiflorum mRNA for generative cell-specific histone H2A Length = 581 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcct 301 |||||||||||||| ||||||||||| Sbjct: 190 gcccccgtctacctagccgccgtcct 215
>gb|BC005468.1| Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:6616 IMAGE:3490058), complete cds Length = 1367 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 329 gctgctgggcggcgtgaccatcgcgcagggcggc 362
>dbj|AB175889.1| Lilium longiflorum gH2A gene for male gametic cell-specific histone H2A, complete cds Length = 3401 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcct 301 |||||||||||||| ||||||||||| Sbjct: 3030 gcccccgtctacctagccgccgtcct 3055
>dbj|AK088040.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430002L09 product:H2A histone family, member X, full insert sequence Length = 1379 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 358 gctgctgggcggcgtgaccatcgcgcagggcggc 391
>dbj|AK008124.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010005I09 product:H2A histone family, member X, full insert sequence Length = 564 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 422 gctgctggccggcgtcaccatcgcgcacggcggc 455 |||||||| |||||| ||||||||||| |||||| Sbjct: 355 gctgctgggcggcgtgaccatcgcgcagggcggc 388
>emb|BX833247.1|CNS09Z82 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 644 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 282 gtctacctcgccgccgtcctcgagta 307 ||||| |||||||||||||||||||| Sbjct: 210 gtctatctcgccgccgtcctcgagta 235
>dbj|AB003782.1| Lilium longiflorum mRNA for gH2A.2, complete cds Length = 601 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcct 301 |||||||||||||| ||||||||||| Sbjct: 148 gcccccgtctacctagccgccgtcct 173
>dbj|AB003781.1| Lilium longiflorum mRNA for gH2A.1, complete cds Length = 588 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcct 301 |||||||||||||| ||||||||||| Sbjct: 145 gcccccgtctacctagccgccgtcct 170
>ref|XM_551996.1| Anopheles gambiae str. PEST ENSANGP00000029020 (ENSANGG00000023190), partial mRNA Length = 297 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Plus Query: 260 gcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 313 ||||||||| ||||||| |||||||| || ||||| ||| | ||||||||||| Sbjct: 48 gcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctggc 101
>gb|AF090826.1|AF090826 Lilium longiflorum histone H2A-like (H2A) mRNA sequence Length = 587 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 276 gcccccgtctacctcgccgccgtcct 301 |||||||||||||| ||||||||||| Sbjct: 190 gcccccgtctacctagccgccgtcct 215
>gb|AF013803.1| Pinus taeda H2A homolog (lp15) gene, complete cds Length = 781 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 285 tacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgcc 344 |||||||| ||||| || || |||||||| |||||| || |||| || || || ||||| Sbjct: 229 tacctcgcggccgttcttgaatacctggcagccgaggtgctggaactggcaggtaacgct 288 Query: 345 gccaaggacaacaagaag 362 ||| ||||||||||||| Sbjct: 289 gcccgggacaacaagaag 306
>gb|AE010418.1| Methanopyrus kandleri AV19 section 117 of 157 of the complete genome Length = 10261 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gaaggggaagaagggcgcggc 145 ||||||||||||||||||||| Sbjct: 9479 gaaggggaagaagggcgcggc 9459
>gb|DQ214188.1| Taeniopygia guttata clone 0058P0024E05 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 42.1 bits (21), Expect = 1.6 Identities = 129/165 (78%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| | ||||| || || ||||| || ||||| || ||||||||| Sbjct: 201 tacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacctg 260 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 261 acggccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 320 Query: 372 gtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctc 416 | ||| | ||||||| |||||| | | |||||| |||||||| Sbjct: 321 atcccccgccacctgcagctcgccatccgcaacgacgaggagctc 365 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgc 224 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>gb|DQ214187.1| Taeniopygia guttata clone 0058P0044E04 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 42.1 bits (21), Expect = 1.6 Identities = 129/165 (78%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| ||||||| ||| | ||||| || || ||||| || ||||| || ||||||||| Sbjct: 201 tacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacctg 260 Query: 312 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 | |||||| | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 261 acggccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 320 Query: 372 gtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctc 416 | ||| | ||||||| |||||| | | |||||| |||||||| Sbjct: 321 atcccccgccacctgcagctcgccatccgcaacgacgaggagctc 365 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 ggccgggctccagttccccgtcggccgc 224 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>ref|XM_518289.1| PREDICTED: Pan troglodytes similar to Histone H2A.g (H2A/g) (H2A.3) (LOC462493), mRNA Length = 1052 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||| ||| |||||||||||| Sbjct: 219 gagtacctgaccgccgagattctggagctggcgggcaacgcggcccgcgacaacaagaag 278 Query: 363 tcccgcatc 371 |||||||| Sbjct: 279 acccgcatc 287
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 cggcgggccgcaaggccggcg 162 ||||||||||||||||||||| Sbjct: 281104 cggcgggccgcaaggccggcg 281084
>ref|XM_870473.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC618147), mRNA Length = 434 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| | |||||| | ||||| || || || ||||| ||| ||||||||||||| Sbjct: 210 gagtacctgacagccgagatcttggaactggcgggaaacgcagcccgggacaacaagaag 269 Query: 363 tcccgcatc 371 |||||||| Sbjct: 270 acccgcatc 278
>ref|NM_175065.2| Homo sapiens histone 2, H2ab (HIST2H2AB), mRNA Length = 448 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 252 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 311 |||||| |||| ||||| | |||||||| || ||||| || || ||||||||||||||| Sbjct: 118 tacgcggagcgggtcggggcaggcgccccggtgtacctggcggcggtcctcgagtacctg 177 Query: 312 gccgc 316 |||| Sbjct: 178 accgc 182
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 101343 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 101284 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 101283 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 101231 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 64394 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 64453 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 64454 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 64506 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Minus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 60783 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 60724 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 60723 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 60671
>ref|NG_002734.1| Mus musculus histone 1, H2aj (Hist1h2aj) pseudogene on chromosome 13 Length = 1357 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 607 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 666 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 667 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 719
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 ctccagttccccgtcggccgcatcg 228 |||||||||||||| |||||||||| Sbjct: 6938 ctccagttccccgttggccgcatcg 6962
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 aggctgctggccggcgtcaccatcg 444 |||||||| |||||||||||||||| Sbjct: 765535 aggctgcttgccggcgtcaccatcg 765511
>ref|XM_963991.1| PREDICTED: Tribolium castaneum similar to CG2812-PA (LOC657535), partial mRNA Length = 3949 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 ccgcatcgggcggtacctcaa 241 ||||||||||||||||||||| Sbjct: 2407 ccgcatcgggcggtacctcaa 2387
>emb|X80330.1|CLH2A232 C.longicaudatus genes for histones H2a.2 and H3.2 Length = 2927 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 303 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 362 ||||||||| |||||||| | ||||||| || || ||||| ||| |||||||||||| Sbjct: 1169 gagtacctgaccgccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaag 1228 Query: 363 tcccgcatc 371 |||||||| Sbjct: 1229 acccgcatc 1237
>emb|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) Length = 1797 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 1074 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 1133 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 1134 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 1186
>gb|BC099406.1| Mus musculus histone 1, H2ac, mRNA (cDNA clone MGC:117571 IMAGE:30789778), complete cds Length = 1075 Score = 42.1 bits (21), Expect = 1.6 Identities = 90/113 (79%) Strand = Plus / Plus Query: 259 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 318 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 135 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 194 Query: 319 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 371 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 195 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 247 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,044,697 Number of Sequences: 3902068 Number of extensions: 3044697 Number of successful extensions: 64187 Number of sequences better than 10.0: 434 Number of HSP's better than 10.0 without gapping: 436 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 60095 Number of HSP's gapped (non-prelim): 4063 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
