Clone Information

BLAST Search Result

Clone Name	bast43g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CSP_PLACG (P08674) Circumsporozoite protein precursor (CS)	34	0.11
2	PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (...	33	0.25
3	PLXD1_HUMAN (Q9Y4D7) Plexin-D1 precursor	33	0.25
4	ARA_DROME (Q24248) Homeobox protein araucan	32	0.42
5	YG3D_YEAST (P53281) Protein YGR136W	32	0.42
6	LORI_MOUSE (P18165) Loricrin	32	0.55
7	EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear a...	31	0.72
8	POLG_LIV (P22338) Genome polyprotein [Contains: Capsid protein C...	31	0.72
9	NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-l...	30	1.2
10	MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)	30	1.6
11	CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc...	30	1.6
12	FRQ_CRESP (Q00586) Frequency clock protein	30	1.6
13	CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca...	30	1.6
14	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	30	1.6
15	POLG_LIVNO (P35766) Genome polyprotein [Contains: Major envelope...	30	1.6
16	POLG_LIVN1 (Q02478) Genome polyprotein [Contains: Major envelope...	30	1.6
17	POLG_LIVK (P35765) Genome polyprotein [Contains: Major envelope ...	30	1.6
18	GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 ...	30	2.1
19	MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-...	30	2.1
20	CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca...	30	2.1
21	K2C3_RABIT (Q29426) Keratin, type II cytoskeletal 3 (Cytokeratin...	29	2.7
22	TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DN...	29	2.7
23	K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin...	29	2.7
24	SCRT2_MOUSE (Q8BTH6) Transcriptional repressor scratch 2 (Scratc...	29	2.7
25	NRDJ_LEPIN (Q8F3P1) Vitamin B12-dependent ribonucleotide reducta...	29	3.6
26	NRDJ_LEPIC (Q72S00) Vitamin B12-dependent ribonucleotide reducta...	29	3.6
27	VNUA_PRVKA (P33485) Probable nuclear antigen	29	3.6
28	TLX1_MOUSE (P43345) T-cell leukemia homeobox protein 1 (Homeobox...	29	3.6
29	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	29	3.6
30	RNPH_PROMM (Q7V4V8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tR...	29	3.6
31	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	29	3.6
32	GRP1_PHAVU (P10495) Glycine-rich cell wall structural protein 1....	29	3.6
33	Y930_LEIXX (Q6AFM6) UPF0182 protein Lxx09300	28	4.7
34	K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokerati...	28	4.7
35	SHOX2_HUMAN (O60902) Short stature homeobox protein 2 (Paired-re...	28	4.7
36	HEX_ADEM1 (P48308) Hexon protein (Late protein 2)	28	4.7
37	VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-)...	28	4.7
38	POLG_LIVSB (Q02012) Genome polyprotein [Contains: Major envelope...	28	4.7
39	CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ...	28	6.1
40	OVO_DROME (P51521) Protein ovo (Protein shaven baby)	28	6.1
41	GUNX_PRUPE (P38534) Endoglucanase CX (EC 3.2.1.4) (Endo-1,4-beta...	28	6.1
42	MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 11...	28	6.1
43	NOLA1_CAEEL (Q9TYK1) Putative H/ACA ribonucleoprotein complex su...	28	6.1
44	DXS1_STRCO (Q9X7W3) 1-deoxy-D-xylulose-5-phosphate synthase 1 (E...	28	6.1
45	TLX1_HUMAN (P31314) T-cell leukemia homeobox protein 1 (Homeobox...	28	6.1
46	GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7	28	6.1
47	GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon...	28	6.1
48	DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)	28	7.9
49	ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger prote...	28	7.9
50	PER_DROWI (Q03297) Period circadian protein (Fragment)	28	7.9
51	DACH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1)	28	7.9

>CSP_PLACG (P08674) Circumsporozoite protein precursor (CS)|
          Length = 401

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           AGGG + G + AG   G  A   GG+G + AGGG     +G
Sbjct: 235 AGGGGNDGAAAAGGGNGGAAAGGGGNGGAAAGGGNGGAAAG 275



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGGRSVCRSG 15
           AGGG + G + AG         AG  G DG + AGGG     +G
Sbjct: 213 AGGGGNGGAAAAGGGGNDGAAAAGGGGNDGAAAAGGGNGGAAAG 256



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 202 AGGGGNDGAAAAGGGGNGGAAAAGGGGNDGAAAAGGG 238



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 180 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 216



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 169 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 205



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 158 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 194



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 147 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 183



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 136 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 172



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 125 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 161



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 114 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 150



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEG---VVAGDLGGDGISCAGGG 36
           AGGG + G + AG         AG  G DG + AGGG
Sbjct: 103 AGGGGNDGAAAAGGGGNDGAAAAGGGGNDGAAAAGGG 139



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRS 30
           GG  + G  N GAA G      GG+G + AGGG +
Sbjct: 251 GGAAAGGGGNGGAAAG------GGNGGAAAGGGNN 279

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>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous|
           system-specific octamer-binding transcription factor
           N-Oct-3) (Brain-specific homeobox/POU domain protein 2)
           (Brain-2) (Protein Brn-2)
          Length = 445

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 18/46 (39%), Positives = 20/46 (43%)
 Frame = -2

Query: 194 GVYMTGLHPLLHP*WDTLLAGGGESRGRSNAGAAEGVVAGDLGGDG 57
           G   +  HPL H  W T L+ GG   G    G   G   G  GGDG
Sbjct: 47  GALQSNGHPLSHAHWITALSHGGSGGGGGGGGGGGG--GGGGGGDG 90

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>PLXD1_HUMAN (Q9Y4D7) Plexin-D1 precursor|
          Length = 1925

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
 Frame = -3

Query: 223  CKLPESQS------CVEFT*RVCILCCIHDGIPFWPAGERVVGGATPERRKVSSQATSAA 62
            C +PE         CV F  R C+    H  + FW     V+   +P R  VS   T   
Sbjct: 1034 CTMPEGALPAPVPVCVRFERRGCV----HGNLTFWYMQNPVITAISPRRSPVSGGRTITV 1089

Query: 61   MGLAARVVAGLSVAPVSFGR 2
             G    +V  +S+A    GR
Sbjct: 1090 AGERFHMVQNVSMAVHHIGR 1109

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>ARA_DROME (Q24248) Homeobox protein araucan|
          Length = 717

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISC------AGGGRSVCRSG 15
           AGGG S G    G A+    G L G+G+        AGGG S C +G
Sbjct: 92  AGGGSSAG--GGGPADLATGGSLDGNGVGTTPTAGGAGGGGSCCENG 136

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>YG3D_YEAST (P53281) Protein YGR136W|
          Length = 241

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 30  RPATTRAANPIAAEVACDDTFRRSGVAPPTTLSPAGQ 140
           +PA TR+A+P +AE A   T  R  V PP+    A Q
Sbjct: 108 KPAFTRSASPKSAEAASSSTVSRPSVPPPSYEPAASQ 144

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>LORI_MOUSE (P18165) Loricrin|
          Length = 486

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISC------AGGGRSVCRSG 15
           GGG   G S+ G+  G   G  GG G  C       GGG S C  G
Sbjct: 412 GGGGCGGGSSGGSGGGCGGGSSGGSGGGCGGGYSGGGGGGSSCGGG 457



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/35 (51%), Positives = 19/35 (54%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRS 30
           GGG S G S+ G   G   G  GG G SC GGG S
Sbjct: 43  GGGSSGGGSSCGGGGG---GSYGG-GSSCGGGGGS 73



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           +GGG S G S+ G       G   G G   +GGG S C  G
Sbjct: 222 SGGGGSSGGSSCGGGYSGGGGSSCGGGGGYSGGGGSSCGGG 262



 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           GGG   G S+ G + G   G  GG   S  GGG S C  G
Sbjct: 182 GGGSYCGGSSGGGSSGGCGGGSGGGKYS-GGGGGSSCGGG 220



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAG---GGRSVC 24
           +GG    GR + G       G  GG G SC G   GG S C
Sbjct: 285 SGGSSCGGRYSGGGGSSCGGGYSGGGGSSCGGGSSGGGSSC 325



 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = -2

Query: 134 GGGES--RGRSNAGAAEGVVAGDLGGDGISCAGGGRS 30
           GGG S   G S  G       G   G G SC GGG S
Sbjct: 109 GGGSSCGGGYSGGGGGSSCGGGSYSGGGSSCGGGGGS 145



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           GGG   G   +G   G   G  GG G SC GGG
Sbjct: 26  GGGGGGGGYYSGGGSGCGGGSSGG-GSSCGGGG 57



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           +GGG S G S  G   G   G  GG G S  GGG
Sbjct: 319 SGGGSSCGGSGGGGYSGGGGGSCGG-GSSGGGGG 351



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           GGG S G   +G       G   G G SC G G
Sbjct: 297 GGGSSCGGGYSGGGGSSCGGGSSGGGSSCGGSG 329



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISC------AGGGRSVCRSG 15
           +GGG S G           +G  GG G SC       GGG S C  G
Sbjct: 133 SGGGSSCGGGGGSGGGVKYSGGGGGGGSSCGGGSSGGGGGGSSCGGG 179

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>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           AG G   G + AG A G  AG  GG G   AGG
Sbjct: 278 AGAGGGAGGAGAGGAGGAGAGGAGGAGAGGAGG 310



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 131 GGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           GG   G + AG A G  AG  GG G   AGG
Sbjct: 238 GGAGAGGAGAGGAGGAGAGGAGGAGAGGAGG 268



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 131 GGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           GG + G   AGA  G  AG  GG G + AGG
Sbjct: 187 GGGAGGAGGAGAGGGAGAGGAGGAGGAGAGG 217



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           AGG  + G   AGA     AG  GG G + AGGG     +G
Sbjct: 250 AGGAGAGGAGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAG 290



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           AG G + G    GA      G  G  G    GGGR    SG
Sbjct: 295 AGAGGAGGAGAGGAGGAGAGGGAGAGGAGAGGGGRGRGGSG 335

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>POLG_LIV (P22338) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1)]
           (Fragment)
          Length = 980

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 157 HDGIPFWPAGERVVGGATPERRKVSSQATSAAMGLAARVVAGLSVAPV 14
           HDG P W   ER+V    P   K+         G+  R +AG+ VA +
Sbjct: 509 HDGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLRALAGVPVAHI 556

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>NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-like protein|
           (GCR 101 snRNP)
          Length = 237

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGR 33
           GGG  RG    G   G   G  GG G    GGGR
Sbjct: 21  GGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGGR 54

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>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)|
          Length = 1147

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/40 (37%), Positives = 15/40 (37%)
 Frame = -2

Query: 158  P*WDTLLAGGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
            P W     GGG   GR   G   G   G  GG G    GG
Sbjct: 911  PNWTPSGGGGGYGGGRGGGGGGRGAAGGGRGGFGGGGGGG 950

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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           G   S G   +GA  GV AG  GG G S  GG
Sbjct: 41  GSAGSAGMGGSGAGAGVGAGGGGGSGASSGGG 72

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>FRQ_CRESP (Q00586) Frequency clock protein|
          Length = 1015

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 128  GESRGRSNAGAAEGVVAGDLGGDGISCAGGGRS 30
            G SRGRSN+ +AE V+    GG   + AGG  S
Sbjct: 976  GSSRGRSNSASAEAVLRA--GGSSAATAGGVES 1006

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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           G   S G   +GA  GV AG  GG G S  GG
Sbjct: 41  GSAGSAGMGGSGAGAGVGAGGGGGSGASSGGG 72

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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           GGG  RG    G  EG   G  GGDG S  GGG
Sbjct: 136 GGGGGRGYGGGGRREG--GGYGGGDGGSYGGGG 166



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           GGG  RG S  G   G   G  GG G   +GGG
Sbjct: 89  GGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGG 121

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>POLG_LIVNO (P35766) Genome polyprotein [Contains: Major envelope protein E]|
           (Fragment)
          Length = 496

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 157 HDGIPFWPAGERVVGGATPERRKVSSQATSAAMGLAARVVAGLSVAPV 14
           HDG P W   ER+V    P   K+         G+  + +AG+ VA +
Sbjct: 229 HDGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHI 276

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>POLG_LIVN1 (Q02478) Genome polyprotein [Contains: Major envelope protein E]|
           (Fragment)
          Length = 496

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 157 HDGIPFWPAGERVVGGATPERRKVSSQATSAAMGLAARVVAGLSVAPV 14
           HDG P W   ER+V    P   K+         G+  + +AG+ VA +
Sbjct: 229 HDGNPHWNNAERLVEFGVPHAVKMDVYNLGDQTGVLLKALAGVPVAHI 276

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>POLG_LIVK (P35765) Genome polyprotein [Contains: Major envelope protein E]|
           (Fragment)
          Length = 496

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 157 HDGIPFWPAGERVVGGATPERRKVSSQATSAAMGLAARVVAGLSVAPV 14
           HDG P W   ER+V    P   K+         G+  + +AG+ VA +
Sbjct: 229 HDGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHI 276

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>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 precursor|
          Length = 384

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -2

Query: 140 LAGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSGV 12
           L GGG + G    GA  G   G  GG G+   GGG +    GV
Sbjct: 101 LGGGGGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAGGGGGV 143



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSV 27
           GGG   G    G A G + G +GG G   +GGG  +
Sbjct: 190 GGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGI 225

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>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           G G  RGR       G     LGGDG  C GGG
Sbjct: 85  GRGRGRGRGRGRPPSG--GSGLGGDGGGCGGGG 115

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>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           + G    G   AGA  GV AG  GG G S  GG
Sbjct: 42  SAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGG 74

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>K2C3_RABIT (Q29426) Keratin, type II cytoskeletal 3 (Cytokeratin-3) (CK-3)|
           (Keratin-3) (K3)
          Length = 629

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGV-VAGDLGGDGISCAGGGRSVCRSG 15
           AGG  SR   N G  + + ++   GG      GGGRS+C SG
Sbjct: 55  AGGFGSRSLYNLGGHKSISMSVAAGGSRAGGFGGGRSICGSG 96

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>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase|
           III alpha)
          Length = 1250

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 152 WDTLLAGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           W +   GGG   G  + G   G   G  GG G    GGG
Sbjct: 793 WSSGPGGGGSGGGGGSGGWGSGTGGGGSGGWGSGTGGGG 831

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>K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)|
           (Keratin-1) (K1) (67 kDa cytokeratin) (Hair alpha
           protein)
          Length = 643

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAG----GGRSVCR 21
           GGG S GR + G + G   G +GG G S  G    GG S  R
Sbjct: 594 GGGSSGGRGSGGGSSG---GSIGGRGSSSGGVKSSGGSSSVR 632

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>SCRT2_MOUSE (Q8BTH6) Transcriptional repressor scratch 2 (Scratch homolog 2|
           zinc finger protein)
          Length = 311

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -2

Query: 149 DTLLAGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           D      G SR R      +   AGD GG G    GGG    RSG
Sbjct: 109 DAFFISDGRSRRRRAGAGGDAAGAGDAGGGG-GGGGGGERAGRSG 152

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>NRDJ_LEPIN (Q8F3P1) Vitamin B12-dependent ribonucleotide reductase (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase nrdJ)
          Length = 1209

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 60  IAAEVACDDTFRRSGVAPPTTLSPAGQKGIPSWMQQ 167
           +A ++     FRR GV  P  L    + GIP W+Q+
Sbjct: 58  VAVDILAQKYFRRKGV--PKYLKKVQEDGIPEWLQK 91

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>NRDJ_LEPIC (Q72S00) Vitamin B12-dependent ribonucleotide reductase (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase nrdJ)
          Length = 1209

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 60  IAAEVACDDTFRRSGVAPPTTLSPAGQKGIPSWMQQ 167
           +A ++     FRR GV  P  L    + GIP W+Q+
Sbjct: 58  VAVDILAQKYFRRKGV--PKYLKKVQEDGIPEWLQK 91

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = -2

Query: 134  GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCR 21
            GG   RG   AG A G   G  GG     A GG  +CR
Sbjct: 1644 GGPSPRGCRGAGRAGGGGRGGCGGGRAPGAAGGPGLCR 1681

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>TLX1_MOUSE (P43345) T-cell leukemia homeobox protein 1 (Homeobox protein|
           Hox-11) (Homeobox TLX-1)
          Length = 332

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/42 (42%), Positives = 19/42 (45%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSGVL 9
           GGG S   + AG      AG  GG G   AGGG   C  G L
Sbjct: 58  GGGGSAAGAGAGGTGAYGAGGPGGPGGP-AGGGGGACSMGPL 98

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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 131  GGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
            GG++    N G+A GV  G  GGDG +   GG
Sbjct: 1830 GGDAGAGGNGGSATGVGNGGNGGDGGNGGDGG 1861



 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = -2

Query: 131 GGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVC--RSGVLW 6
           GG   G   AG A G + G  G  G+  AGGG        G++W
Sbjct: 169 GGSGGGTGGAGGAGGWLFGVGGAGGVGGAGGGTGGAGGPGGLIW 212

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>RNPH_PROMM (Q7V4V8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 244

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 11/43 (25%)
 Frame = -3

Query: 187 T*RVCILC--CIHDGIPFWPAGE---------RVVGGATPERR 92
           T R  +LC  C+ +G+P W  G+         R++ G+TP+R+
Sbjct: 38  TGRTSVLCSVCVEEGVPRWRKGQGKGWLSAEYRLLPGSTPQRQ 80

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>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 131 GGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSG 15
           GG+  G + A AA G   G LGG G    G G S   +G
Sbjct: 211 GGQGAGAAAAAAAGGAGQGGLGGQGAG-QGAGASAAAAG 248

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>GRP1_PHAVU (P10495) Glycine-rich cell wall structural protein 1.0 precursor|
           (GRP 1.0)
          Length = 252

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           AGGGE  G+   GA  G   G  GG G    GGG
Sbjct: 190 AGGGEGAGQ---GAGGGYGGGAAGGGGRGSGGGG 220



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           G G + G   AG  EG   G  GG G   AGGG
Sbjct: 180 GSGGAHGGGAAGGGEGAGQGAGGGYGGGAAGGG 212



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           GGG   G    G A G  +G  GG+G    GG
Sbjct: 130 GGGGGSGGGGGGGAGGAGSGYGGGEGSGAGGG 161



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           AGGGE      AGA  G   G  GG G +  GGG
Sbjct: 71  AGGGEG-----AGAGYGAAGGGHGGGGGNGGGGG 99

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>Y930_LEIXX (Q6AFM6) UPF0182 protein Lxx09300|
          Length = 987

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 149 DTLLAG-GGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRS 30
           D+L  G  G + G +N  A  G   G   GD  S AGGG S
Sbjct: 876 DSLFGGDSGATAGDNNVPATPGGSGGGSSGDAGSSAGGGSS 916

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>K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)|
           (Keratin-10) (K10) (56 kDa cytokeratin) (Keratin, type I
           cytoskeletal 59 kDa)
          Length = 569

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGG 39
           +GGG   G S  G   G  +G  GG G S  GG
Sbjct: 506 SGGGSHGGSSGGGYGGGSSSGGAGGHGGSSGGG 538

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>SHOX2_HUMAN (O60902) Short stature homeobox protein 2 (Paired-related homeobox|
           protein SHOT) (Homeobox protein Og12X)
          Length = 331

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/38 (44%), Positives = 17/38 (44%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCR 21
           GGG   G    G   GV  G  GG     AGGGRS  R
Sbjct: 62  GGGGGGGGGGGGGGGGVGGGGAGGG----AGGGRSPVR 95

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>HEX_ADEM1 (P48308) Hexon protein (Late protein 2)|
          Length = 909

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 15  TGATDRPATTRAANPIAAEVACDDTFRRSGVAPPTTLSPAGQKGIPSWMQQ 167
           TGA  +  T   AN + + +  D     +    P    PA Q+G+ +WM++
Sbjct: 137 TGADSKTMTIAQANIVGSTIDQDGLKINNVALNPNAGEPAVQEGLENWMEE 187

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>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen|
           Mab46F11)
          Length = 661

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -2

Query: 149 DTLLAGGG-----ESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSV 27
           DT  A GG     E   +S +G AEG   G  GG+G    GG R V
Sbjct: 12  DTRGARGGDWSDDEDTAKSFSGEAEGDGVGGSGGEGGGYQGGNRDV 57

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>POLG_LIVSB (Q02012) Genome polyprotein [Contains: Major envelope protein E]|
           (Fragment)
          Length = 496

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -3

Query: 157 HDGIPFWPAGERVVGGATPERRKVSSQATSAAMGLAARVVAGLSVAPV 14
           H+G P W   ER+V    P   K+         G+  + +AG+ VA +
Sbjct: 229 HEGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHI 276

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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A|
           subunit (Voltage-gated calcium channel alpha subunit
           Cav2.1) (Calcium channel, L type, alpha-1 polypeptide
           isoform 4) (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/28 (57%), Positives = 16/28 (57%)
 Frame = -2

Query: 116 GRSNAGAAEGVVAGDLGGDGISCAGGGR 33
           G   AGAA GVV G  GG G   AGG R
Sbjct: 13  GGGGAGAAAGVVVGAAGGRG---AGGSR 37

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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGR 33
           +G G S G  NAG+  G      GG G    GGGR
Sbjct: 474 SGSGSSSGNQNAGSGAGSPGSGAGGGG--GMGGGR 506

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>GUNX_PRUPE (P38534) Endoglucanase CX (EC 3.2.1.4) (Endo-1,4-beta-glucanase)|
           (CX-cellulase) (Fragment)
          Length = 251

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +2

Query: 167 KDANPSCK---LHTRLRLWEFADRYIFEPTDGLADL 265
           KD++PS     LHT +++++FADRY    +D +  +
Sbjct: 38  KDSDPSYSGKLLHTAMKVFDFADRYRGSYSDSIGSV 73

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>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 15  TGATDRPATTRAANPIAAEVACDDTFRRSGVAPPTTL 125
           +G T  P T ++ +P ++  A   T    G +PPTT+
Sbjct: 29  SGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTV 65

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>NOLA1_CAEEL (Q9TYK1) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein
          Length = 244

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           AGGG  RG    G   G    D GG G    GGG
Sbjct: 149 AGGGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGG 182

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>DXS1_STRCO (Q9X7W3) 1-deoxy-D-xylulose-5-phosphate synthase 1 (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase 1) (DXP synthase
           1) (DXPS 1)
          Length = 656

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 81  DDTFRRSGVAPPTTLSPAGQKGIPSW 158
           +D F   GV  P T  P G  G PSW
Sbjct: 293 EDHFHTVGVMDPLTCEPLGPAGGPSW 318

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>TLX1_HUMAN (P31314) T-cell leukemia homeobox protein 1 (Homeobox protein|
           Hox-11) (TCL-3 proto-oncogene)
          Length = 330

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGRSVCRSGVL 9
           GGG S   + AG A     G  GG G    GGG   C  G L
Sbjct: 58  GGGGSAAATGAGGAGAYGTGGPGGPGGPAGGGG--ACSMGPL 97

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>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAEGVVAGDLGGDGISCAGGGR 33
           GGG  RG    G   G   G  GG G    GGGR
Sbjct: 91  GGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGR 124

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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
 Frame = -2

Query: 227 GLQTPRVSVLCGVYMTGLHPLLHP*WDTLLA------GGGESRGRSNAGAAEGVVAGDLG 66
           G  T  +S + G  + G H  ++P  D   A      GGG S G    G   G   G  G
Sbjct: 87  GAATAAISEMDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGG 146

Query: 65  GDGISCAGGG 36
           G G    GGG
Sbjct: 147 GYGGGGDGGG 156

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>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)|
          Length = 563

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 134 GGGESRGRSNA-GAAEGVVAGDLGGDGISCAGGG 36
           GGG S G SN  G   G   G  GG G S  GGG
Sbjct: 20  GGGYSNGYSNGHGGGYGGRGGGYGGGGGSGYGGG 53

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>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2)
          Length = 532

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 137 AGGGESRGRSNAGAAEGVVAGDLGGDGISCAGGG 36
           +G G + G S  G+  G   G  GG G   +GGG
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGG 513

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>PER_DROWI (Q03297) Period circadian protein (Fragment)|
          Length = 1093

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 122 SRGRSNAGAAEGVVAGDLGGDGISCAG-GGRSVCRSG 15
           S+ +   G A G   G +GG G SC+G GG     SG
Sbjct: 748 SQNKGPTGVAAGGAGGGVGGGGGSCSGLGGNGNVGSG 784

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>DACH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1)|
          Length = 751

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 134 GGGESRGRSNAGAAE---GVVAGDLGGDGISCAGGGRS 30
           GGG S G    G +     + AG  GG G+S  GGG S
Sbjct: 84  GGGGSGGNGGGGGSNCNPSLAAGSSGG-GVSAGGGGAS 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,715,137
Number of Sequences: 219361
Number of extensions: 782351
Number of successful extensions: 4286
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4129
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result