| Clone Name | bast43g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473864.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 531 bits (268), Expect = e-148 Identities = 352/380 (92%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 26 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 85 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 86 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 145 Query: 121 ccctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgc 180 | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 146 cgctcggctcctaccagttggtgatcagcgagatcgactcgtccgcggcgacgtcgctgc 205 Query: 181 aggccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagct 240 ||||||| |||||||||||||| |||||| |||||||||||||| ||||||| ||| Sbjct: 206 aggccgtgaagctgctcgcgctgtacctctccggagacaaggaaagtgcgattgtcagtc 265 Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 266 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 325 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 326 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 385 Query: 361 gaactctggacctgcatgca 380 |||||||||||||||||||| Sbjct: 386 gaactctggacctgcatgca 405
>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full insert sequence Length = 1207 Score = 531 bits (268), Expect = e-148 Identities = 352/380 (92%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 158 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 217 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 218 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 277 Query: 121 ccctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgc 180 | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 278 cgctcggctcctaccagttggtgatcagcgagatcgactcgtccgcggcgacgtcgctgc 337 Query: 181 aggccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagct 240 ||||||| |||||||||||||| |||||| |||||||||||||| ||||||| ||| Sbjct: 338 aggccgtgaagctgctcgcgctgtacctctccggagacaaggaaagtgcgattgtcagtc 397 Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 398 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 457 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 458 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 517 Query: 361 gaactctggacctgcatgca 380 |||||||||||||||||||| Sbjct: 518 gaactctggacctgcatgca 537
>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full insert sequence Length = 1218 Score = 531 bits (268), Expect = e-148 Identities = 352/380 (92%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 190 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 191 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 250 Query: 121 ccctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgc 180 | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 251 cgctcggctcctaccagttggtgatcagcgagatcgactcgtccgcggcgacgtcgctgc 310 Query: 181 aggccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagct 240 ||||||| |||||||||||||| |||||| |||||||||||||| ||||||| ||| Sbjct: 311 aggccgtgaagctgctcgcgctgtacctctccggagacaaggaaagtgcgattgtcagtc 370 Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 371 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 430 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 431 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 490 Query: 361 gaactctggacctgcatgca 380 |||||||||||||||||||| Sbjct: 491 gaactctggacctgcatgca 510
>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full insert sequence Length = 1262 Score = 531 bits (268), Expect = e-148 Identities = 352/380 (92%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 156 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 215 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 216 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 275 Query: 121 ccctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgc 180 | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 cgctcggctcctaccagttggtgatcagcgagatcgactcgtccgcggcgacgtcgctgc 335 Query: 181 aggccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagct 240 ||||||| |||||||||||||| |||||| |||||||||||||| ||||||| ||| Sbjct: 336 aggccgtgaagctgctcgcgctgtacctctccggagacaaggaaagtgcgattgtcagtc 395 Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 396 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 455 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 456 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 515 Query: 361 gaactctggacctgcatgca 380 |||||||||||||||||||| Sbjct: 516 gaactctggacctgcatgca 535
>dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRNA for epsilon1-COP, complete cds Length = 1207 Score = 531 bits (268), Expect = e-148 Identities = 352/380 (92%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 148 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 207 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 208 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 267 Query: 121 ccctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgc 180 | ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 268 cgctcggctcctaccagttggtgatcagcgagatcgactcgtccgcggcgacgtcgctgc 327 Query: 181 aggccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagct 240 ||||||| |||||||||||||| |||||| |||||||||||||| ||||||| ||| Sbjct: 328 aggccgtgaagctgctcgcgctgtacctctccggagacaaggaaagtgcgattgtcagtc 387 Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 388 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 447 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 448 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 507 Query: 361 gaactctggacctgcatgca 380 |||||||||||||||||||| Sbjct: 508 gaactctggacctgcatgca 527
>gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds Length = 1180 Score = 511 bits (258), Expect = e-142 Identities = 348/378 (92%) Strand = Plus / Plus Query: 3 ctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcccg 62 ||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 131 ctgcggaacctcttctacctgggcgcctaccaggcagccatcaacaacagcgacgtcccg 190 Query: 63 ggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcgcc 122 |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 191 ggcctcgacgccgacgccgccgctgagcgcgacgccatcgtcttccgctcctacatcgcc 250 Query: 123 ctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcag 182 ||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 251 ctcggctcctaccagctggtgatcagcgagatcgactcgtcagccgctacctcgctgcag 310 Query: 183 gccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagcttg 242 ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct: 311 gccgtgaagctgctcgcgctgtacctcactggagacaaggaaggtgctatctccagtctc 370 Query: 243 aaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctgga 302 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 371 aaggaatggttgagtgattcagcaattggaagcaatcctgttctgcggttgattgctgga 430 Query: 303 attatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactggggga 362 ||| |||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| Sbjct: 431 attgtatttatgcatgagcaggactacaatgaggctctcaagcacacacactctggagga 490 Query: 363 actctggacctgcatgca 380 |||||||| |||||||| Sbjct: 491 actctggatttgcatgca 508
>gb|AY105373.1| Zea mays PCO148993 mRNA sequence Length = 1262 Score = 511 bits (258), Expect = e-142 Identities = 348/378 (92%) Strand = Plus / Plus Query: 3 ctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcccg 62 ||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 131 ctgcggaacctcttctacctgggcgcctaccaggcagccatcaacaacagcgacgtcccg 190 Query: 63 ggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcgcc 122 |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 191 ggcctcgacgccgacgccgccgctgagcgcgacgccatcgtcttccgctcctacatcgcc 250 Query: 123 ctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcag 182 ||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 251 ctcggctcctaccagctggtgatcagcgagatcgactcgtcagccgctacctcgctgcag 310 Query: 183 gccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagcttg 242 ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct: 311 gccgtgaagctgctcgcgctgtacctcactggagacaaggaaggtgctatctccagtctc 370 Query: 243 aaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctgga 302 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 371 aaggaatggttgagtgattcagcaattggaagcaatcctgttctgcggttgattgctgga 430 Query: 303 attatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactggggga 362 ||| |||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| Sbjct: 431 attgtatttatgcatgagcaggactacaatgaggctctcaagcacacacactctggagga 490 Query: 363 actctggacctgcatgca 380 |||||||| |||||||| Sbjct: 491 actctggatttgcatgca 508
>gb|BT016527.1| Zea mays clone Contig360 mRNA sequence Length = 1201 Score = 504 bits (254), Expect = e-139 Identities = 347/378 (91%) Strand = Plus / Plus Query: 3 ctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcccg 62 ||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 141 ctgcggaacctcttctacctgggcgcctaccaggcagccatcaacaacagcgacgtcccg 200 Query: 63 ggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcgcc 122 |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 201 ggcctcgacgccgacgccgccgctgagcgcgacgccatcgtcttccgctcctacatcgcc 260 Query: 123 ctcggatcctaccagctggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcag 182 ||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||| Sbjct: 261 ctcggctcctaccagctggtgatcagcgagatcgactcgtcagccgctacctcgctgcag 320 Query: 183 gccgtcaagctgctcgcgctctacctcaccggagacaaggaaggtgcgatctccagcttg 242 ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct: 321 gccgtgaagctgctcgcgctgtacctcactggagacaaggaaggtgctatctccagtctc 380 Query: 243 aaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctgga 302 ||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||| Sbjct: 381 aaggagtggttgagtgattcagcaattggaagcaatcctgttctgagattgattgctgga 440 Query: 303 attatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactggggga 362 |||||||||||||||||||| |||||||| ||||||||||| |||||||| |||| ||| Sbjct: 441 attatatttatgcatgagcaggactacaatgaggctctcaaacacacacactctggagga 500 Query: 363 actctggacctgcatgca 380 |||||||| |||||||| Sbjct: 501 actctggatttgcatgca 518
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 224 bits (113), Expect = 2e-55 Identities = 131/137 (95%) Strand = Plus / Minus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 84712 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 84653 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 84652 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 84593 Query: 121 ccctcggatcctaccag 137 | ||||| ||||||||| Sbjct: 84592 cgctcggctcctaccag 84576 Score = 178 bits (90), Expect = 9e-42 Identities = 123/134 (91%) Strand = Plus / Minus Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 83408 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 83349 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 83348 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 83289 Query: 361 gaactctggacctg 374 |||||||||||||| Sbjct: 83288 gaactctggacctg 83275 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 139 tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 198 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 84470 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 84411 Query: 199 cgctctacctcaccggagacaagg 222 |||| |||||| |||||||||||| Sbjct: 84410 cgctgtacctctccggagacaagg 84387
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 224 bits (113), Expect = 2e-55 Identities = 131/137 (95%) Strand = Plus / Minus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 31102631 acctgcgcaacctcttctacctcggcgcctaccaggccgccatcaacaacagcgacgtcc 31102572 Query: 61 cgggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcg 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 31102571 cgggcctcgacgccgacgccgccgccgagcgcgacgccatcgtcttccgctcctacgtcg 31102512 Query: 121 ccctcggatcctaccag 137 | ||||| ||||||||| Sbjct: 31102511 cgctcggctcctaccag 31102495 Score = 178 bits (90), Expect = 9e-42 Identities = 123/134 (91%) Strand = Plus / Minus Query: 241 tgaaggaatggttgagtgattcagccataggaagcaatcctgttctgcgattgattgctg 300 |||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| Sbjct: 31101327 tgaaggaatggttgagtgattcggcggttggaagcaatcctgttctacgattgattgctg 31101268 Query: 301 gaattatatttatgcatgagcaagactacaacgaggctctcaagcacacacatactgggg 360 |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | Sbjct: 31101267 gaattatatttatgcatgagcaagactacactgaagctctcaagcacacacactctggtg 31101208 Query: 361 gaactctggacctg 374 |||||||||||||| Sbjct: 31101207 gaactctggacctg 31101194 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 139 tggtgatcagcgagatcgactcgtcggcggcgacgtcgctgcaggccgtcaagctgctcg 198 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 31102389 tggtgatcagcgagatcgactcgtccgcggcgacgtcgctgcaggccgtgaagctgctcg 31102330 Query: 199 cgctctacctcaccggagacaagg 222 |||| |||||| |||||||||||| Sbjct: 31102329 cgctgtacctctccggagacaagg 31102306 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Plus Query: 84 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 137 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 32851643 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 32851696
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 165 bits (83), Expect = 1e-37 Identities = 122/135 (90%) Strand = Plus / Plus Query: 3 ctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgtcccg 62 ||||| |||||||||||||| |||||||||||| | ||||| ||||||| |||| ||| | Sbjct: 39663 ctgcggaacctcttctacctgggcgcctaccaggcagccattaacaacatcgacatcctg 39722 Query: 63 ggcctcgacgccgacgccgcggccgagcgcgacgtcatcgtcttccgctcctacatcgcc 122 ||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 39723 ggcctcgacgccgccgccgccgctgagcgcgacgccatcgtcttccgctcctacatcgcc 39782 Query: 123 ctcggatcctaccag 137 ||||| ||||||||| Sbjct: 39783 ctcggctcctaccag 39797 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 174 tcgctgcaggccgtcaagctgctcgcgctctacctcaccggagacaagg 222 |||||||||||||| ||||||||||| || |||||||| |||||||||| Sbjct: 39837 tcgctgcaggccgtgaagctgctcgctctgtacctcactggagacaagg 39885
>ref|NM_102800.2| Arabidopsis thaliana protein transporter AT1G30630 mRNA, complete cds Length = 1199 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 419 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 478 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 479 cattctggaggaaccatggatctgcatgc 507
>gb|AF348588.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 879 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 331 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 390 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 391 cattctggaggaaccatggatctgcatgc 419
>gb|AY063113.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 910 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 331 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 390 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 391 cattctggaggaaccatggatctgcatgc 419
>gb|AF370325.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit (At1g30630) mRNA, complete cds Length = 1172 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 394 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 453 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 454 cattctggaggaaccatggatctgcatgc 482
>emb|BX814617.1|CNS0ADQB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1174 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 394 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 453 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 454 cattctggaggaaccatggatctgcatgc 482
>emb|BX841764.1|CNS09Y7R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 380 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 439 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 440 cattctggaggaaccatggatctgcatgc 468
>gb|AY087474.1| Arabidopsis thaliana clone 35814 mRNA, complete sequence Length = 1189 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 419 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 478 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 479 cattctggaggaaccatggatctgcatgc 507
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||||| ||||||||| ||||||| || |||||||| |||||||| Sbjct: 34812 ttgattgctggtactatattcatgcatgaggaagactataatgaggctctgaagcacact 34753 Query: 351 catactgggggaac 364 ||| |||| ||||| Sbjct: 34752 cattctggaggaac 34739
>ref|XM_474096.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 65.9 bits (33), Expect = 9e-08 Identities = 63/73 (86%) Strand = Plus / Plus Query: 84 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccagctggtg 143 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||||||||| Sbjct: 130 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccagctggtg 189 Query: 144 atcagcgagatcg 156 ||| |||||||| Sbjct: 190 atcgacgagatcg 202
>dbj|AB042113.1| Glycine max cope1 mRNA for epsilon1-COP, complete cds Length = 1269 Score = 60.0 bits (30), Expect = 5e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 1 acctgcgcaacctcttctacctcggcgcctaccagtccgccatcaacaacagcgacgt 58 |||| |||||| ||||||||||||||| ||||| |||||||||||| ||||||||| Sbjct: 84 acctccgcaacaacttctacctcggcgcttaccaagccgccatcaacagcagcgacgt 141
>emb|BX814442.1|CNS0ADOH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1145 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacaca 350 ||||||||||| | |||| | ||||||||| ||||||| | |||||||| |||||||| Sbjct: 408 ttgattgctggtactatactcatgcatgaggaagactatgatgaggctctgaagcacact 467 Query: 351 catactgggggaactctggacctgcatgc 379 ||| |||| ||||| |||| |||||||| Sbjct: 468 cattctggaggaaccatggatctgcatgc 496
>gb|AC149424.1| Populus trichocarpa clone Pop1-011N15, complete sequence Length = 152544 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 349 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 120897 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 120839
>gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, complete sequence Length = 131790 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 349 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 5324 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 5266
>gb|AC149295.1| Populus trichocarpa clone Pop1-008L01, complete sequence Length = 101981 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 291 ttgattgctggaattatatttatgcatgagcaagactacaacgaggctctcaagcacac 349 |||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||| Sbjct: 71706 ttgattgctggaatcatattaatgcatgaggaggattacaatgaggctctgaaacacac 71648
>ref|XM_465338.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 43 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 102 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 74 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 133 Query: 103 tcttccgctcctacatcg 120 |||||| ||||| ||||| Sbjct: 134 tcttccactcctgcatcg 151
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 43 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 102 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 13531105 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 13531046 Query: 103 tcttccgctcctacatcg 120 |||||| ||||| ||||| Sbjct: 13531045 tcttccactcctgcatcg 13531028 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 27678188 cgacgccgacgccgcggccg 27678207 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 21628607 cgacgccgacgccgcggccg 21628626
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 43 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 102 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 46410 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 46351 Query: 103 tcttccgctcctacatcg 120 |||||| ||||| ||||| Sbjct: 46350 tcttccactcctgcatcg 46333
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 43 tcaacaacagcgacgtcccgggcctcgacgccgacgccgcggccgagcgcgacgtcatcg 102 ||||||||||||| ||||| | |||| ||||| |||||| | | |||||| || ||||| Sbjct: 117034 tcaacaacagcgatgtccctgacctcaccgccgccgccgccgacaagcgcggcgccatcg 116975 Query: 103 tcttccgctcctacatcg 120 |||||| ||||| ||||| Sbjct: 116974 tcttccactcctgcatcg 116957
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 71 cgccgacgccgcggccgagcgcga 94 |||||||||||||||||||||||| Sbjct: 2065829 cgccgacgccgcggccgagcgcga 2065806
>ref|NM_129037.3| Arabidopsis thaliana protein transporter AT2G34840 mRNA, complete cds Length = 1161 Score = 44.1 bits (22), Expect = 0.33 Identities = 49/58 (84%) Strand = Plus / Plus Query: 100 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 157 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 228 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 285 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 cgattgattgctggaattatatttatgcatga 319 |||||||||||||| ||||| || |||||||| Sbjct: 422 cgattgattgctggtattattttcatgcatga 453
>gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds Length = 882 Score = 44.1 bits (22), Expect = 0.33 Identities = 49/58 (84%) Strand = Plus / Plus Query: 100 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 157 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 137 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 194 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 cgattgattgctggaattatatttatgcatga 319 |||||||||||||| ||||| || |||||||| Sbjct: 331 cgattgattgctggtattattttcatgcatga 362
>emb|AJ720775.1| Gallus gallus mRNA for hypothetical protein, clone 25f12 Length = 1286 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 14 cttctacctcggcgcctaccagtccgccatcaac 47 ||||||| |||| ||||||||| ||||||||||| Sbjct: 118 cttctacatcggggcctaccaggccgccatcaac 151
>ref|NM_001006339.1| Gallus gallus coatomer protein complex, subunit epsilon (COPE), mRNA Length = 1286 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 14 cttctacctcggcgcctaccagtccgccatcaac 47 ||||||| |||| ||||||||| ||||||||||| Sbjct: 118 cttctacatcggggcctaccaggccgccatcaac 151
>gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds Length = 1129 Score = 44.1 bits (22), Expect = 0.33 Identities = 49/58 (84%) Strand = Plus / Plus Query: 100 tcgtcttccgctcctacatcgccctcggatcctaccagctggtgatcagcgagatcga 157 |||||||||| || |||||||||||||| ||| ||||| || ||||| |||||||| Sbjct: 196 tcgtcttccgatcttacatcgccctcggtagctatcagcttgttatcagtgagatcga 253 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 cgattgattgctggaattatatttatgcatga 319 |||||||||||||| ||||| || |||||||| Sbjct: 390 cgattgattgctggtattattttcatgcatga 421
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tcgtcggcggcgacgtcgctgc 180 |||||||||||||||||||||| Sbjct: 28932343 tcgtcggcggcgacgtcgctgc 28932364
>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence Length = 145009 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gaatggttgagtgattcagcca 267 |||||||||||||||||||||| Sbjct: 40373 gaatggttgagtgattcagcca 40352
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 gggcctcgacgccgacgccgcggccg 87 ||||||||||||||||| |||||||| Sbjct: 8902964 gggcctcgacgccgacggcgcggccg 8902989 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 cgacgccgacgccgcggccgagcgcg 93 |||||||| ||||||||||||||||| Sbjct: 4937907 cgacgccgtcgccgcggccgagcgcg 4937882
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tcgtcggcggcgacgtcgctgc 180 |||||||||||||||||||||| Sbjct: 49880 tcgtcggcggcgacgtcgctgc 49901
>dbj|AK068606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157G23, full insert sequence Length = 1650 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tcgtcggcggcgacgtcgctgc 180 |||||||||||||||||||||| Sbjct: 120 tcgtcggcggcgacgtcgctgc 141
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Plus Query: 84 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 137 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 46933 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 46986
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 140 ggtgatcagcgagatcgactcg 161 |||||||||||||||||||||| Sbjct: 497344 ggtgatcagcgagatcgactcg 497323
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 44.1 bits (22), Expect = 0.33 Identities = 46/54 (85%) Strand = Plus / Plus Query: 84 gccgagcgcgacgtcatcgtcttccgctcctacatcgccctcggatcctaccag 137 |||||||||||| | || ||| |||||||||||||||| |||| ||| ||||| Sbjct: 113930 gccgagcgcgactccctcctctaccgctcctacatcgccatcggctcccaccag 113983
>gb|DQ182118.1| Uncultured bacterium clone SRP17 putative nitrite reductase (nirS) gene, partial cds Length = 410 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gatcagcgagatcgactcgtc 163 ||||||||||||||||||||| Sbjct: 309 gatcagcgagatcgactcgtc 289
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cctgcgcaacctcttctacct 22 ||||||||||||||||||||| Sbjct: 2146009 cctgcgcaacctcttctacct 2145989
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 acgccgcggccgagcgcgacg 96 ||||||||||||||||||||| Sbjct: 1816506 acgccgcggccgagcgcgacg 1816486
>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174442 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 attgctggaattatatttatg 314 ||||||||||||||||||||| Sbjct: 142249 attgctggaattatatttatg 142269
>emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-73E17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141534 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 attgctggaattatatttatg 314 ||||||||||||||||||||| Sbjct: 26191 attgctggaattatatttatg 26211
>ref|XM_466314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2316 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 1494 cgacgccgacgccgcggccg 1475
>ref|NM_193877.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cggcggcgacgtcgctgcag 182 |||||||||||||||||||| Sbjct: 944 cggcggcgacgtcgctgcag 963
>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster, complete sequence Length = 32299 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 20872 cgacgccgacgccgcggccg 20891
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgccgcggccgagcgcgacg 96 |||||||||||||||||||| Sbjct: 2366287 cgccgcggccgagcgcgacg 2366306
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggccgtcaagctgctcgcgctct 204 |||||||| ||||||||||||||| Sbjct: 1705743 aggccgtcgagctgctcgcgctct 1705766
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggccgtcaagctgctcgcgctct 204 |||||||| ||||||||||||||| Sbjct: 3040602 aggccgtcgagctgctcgcgctct 3040625
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tcgacgccgacgccgcggcc 86 |||||||||||||||||||| Sbjct: 4761562 tcgacgccgacgccgcggcc 4761581
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete sequence Length = 108484 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 288 cgattgattgctggaattatatttatgcatga 319 |||||||||||||| ||||| || |||||||| Sbjct: 31785 cgattgattgctggtattattttcatgcatga 31816 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 tcgtcttccgctcctacatcgccctcgg 127 |||||||||| || |||||||||||||| Sbjct: 31416 tcgtcttccgatcttacatcgccctcgg 31443
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgccgacgccgcggccgagc 90 |||||||||||||||||||| Sbjct: 3536840 cgccgacgccgcggccgagc 3536821
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgcgacgtcatcgtcttccg 109 |||||||||||||||||||| Sbjct: 897385 cgcgacgtcatcgtcttccg 897404
>gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, region 93E4-93E7, BAC clone BACR48I01, complete sequence Length = 170535 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ctcgtcggcggcgacgtcgctgca 181 ||||||| |||||||||||||||| Sbjct: 27862 ctcgtcgacggcgacgtcgctgca 27839
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggccgtcaagctgctcgcgctct 204 |||||||| ||||||||||||||| Sbjct: 2189235 aggccgtcgagctgctcgcgctct 2189258
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cgccgacgccgcggccgagcgcga 94 |||||||| ||||||||||||||| Sbjct: 2602883 cgccgacgtcgcggccgagcgcga 2602906
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cggcggcgacgtcgctgcag 182 |||||||||||||||||||| Sbjct: 15564591 cggcggcgacgtcgctgcag 15564572
>emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in linkage group 22, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cagctggtgatcagcgagat 154 |||||||||||||||||||| Sbjct: 108644 cagctggtgatcagcgagat 108663
>gb|AC016132.4|AC016132 Drosophila melanogaster, chromosome 3R, region 93D-93D, BAC clone BACR34E13, complete sequence Length = 167475 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ctcgtcggcggcgacgtcgctgca 181 ||||||| |||||||||||||||| Sbjct: 145027 ctcgtcgacggcgacgtcgctgca 145004
>dbj|AB186127.1| Oryza sativa (japonica cultivar-group) mRNA for NPH3, complete cds Length = 2885 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 1888 cgacgccgacgccgcggccg 1869
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 58 tcccgggcctcgacgccgacgccgcggc 85 ||||||| |||| ||||||||||||||| Sbjct: 3172851 tcccggggctcggcgccgacgccgcggc 3172878
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 117557 cgacgccgacgccgcggccg 117576
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 157857 cgacgccgacgccgcggccg 157876
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ctcggcgcctaccagtccgc 40 |||||||||||||||||||| Sbjct: 1903503 ctcggcgcctaccagtccgc 1903522
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cggcggcgacgtcgctgcag 182 |||||||||||||||||||| Sbjct: 122100 cggcggcgacgtcgctgcag 122081
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cggcggcgacgtcgctgcag 182 |||||||||||||||||||| Sbjct: 2488 cggcggcgacgtcgctgcag 2469
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 64054 cgacgccgacgccgcggccg 64073
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 10004 cgacgccgacgccgcggccg 10023
>emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythronolyde B synthase II & III Length = 20444 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 8838 cgacgccgacgccgcggccg 8857
>dbj|AK107582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E05, full insert sequence Length = 1801 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 995 cgacgccgacgccgcggccg 1014
>ref|NM_210351.1| Eremothecium gossypii AER138Cp (AER138C), mRNA Length = 1629 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cgcgacgtcatcgtcttccg 109 |||||||||||||||||||| Sbjct: 1527 cgcgacgtcatcgtcttccg 1508
>dbj|AK068106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132B11, full insert sequence Length = 1010 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 423 cgacgccgacgccgcggccg 404
>emb|AL831726.11| Zebrafish DNA sequence from clone DKEY-49N23 in linkage group 22, complete sequence Length = 245697 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cagctggtgatcagcgagat 154 |||||||||||||||||||| Sbjct: 226486 cagctggtgatcagcgagat 226505
>gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73 of 118 of the complete sequence Length = 255463 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ctcgtcggcggcgacgtcgctgca 181 ||||||| |||||||||||||||| Sbjct: 29699 ctcgtcgacggcgacgtcgctgca 29676
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 44845 cgacgccgacgccgcggccg 44826
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 2727094 cgacgccgacgccgcggccg 2727113
>gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA gene, complete cds Length = 20235 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgacgccgacgccgcggccg 87 |||||||||||||||||||| Sbjct: 8811 cgacgccgacgccgcggccg 8830 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,293,050 Number of Sequences: 3902068 Number of extensions: 3293050 Number of successful extensions: 63927 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60970 Number of HSP's gapped (non-prelim): 2952 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)