ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A... 28 6.8

>KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5) (HK2)
           (HPCN1)
          Length = 613

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 1   DPGIHPVPPPSEQST*LPRARQP 69
           DPG+ P+PP  E+   LPR R+P
Sbjct: 72  DPGVRPLPPLPEE---LPRPRRP 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,795,932
Number of Sequences: 219361
Number of extensions: 154451
Number of successful extensions: 674
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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