| Clone Name | bast43f10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 67743 tgcttctgctgctcgcgtcgg 67763
>gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA incP1beta region, partial sequence and transposon Tntsa, complete sequence Length = 38756 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 12400 tgcttctgctgctcgcgtcgg 12420
>emb|AJ863570.1| IncP-1beta multiresistance plasmid pB8 Length = 57198 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 21134 tgcttctgctgctcgcgtcgg 21154
>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the 3' end of the HS6ST2 gene for heparan sulfate 6-O-sulfotransferase 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 184975 Score = 42.1 bits (21), Expect = 0.54 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 cctccaccaagtgagcagagcacctagct 50 ||||||||| |||||||||||||||||| Sbjct: 180472 cctccaccagctgagcagagcacctagct 180500
>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 67743 tgcttctgctgctcgcgtcgg 67763
>gb|U66917.2| Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence Length = 108845 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 78711 tgcttctgctgctcgcgtcgg 78691
>emb|AJ639924.1| Plasmid pB3 complete genome Length = 56167 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 13385 tgcttctgctgctcgcgtcgg 13405
>emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multiresistance plasmid pB10 Length = 64508 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 10269 tgcttctgctgctcgcgtcgg 10289
>gb|U67194.4|EAU67194 Enterobacter aerogenes plasmid R751, complete sequence Length = 53423 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 27119 tgcttctgctgctcgcgtcgg 27139
>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence Length = 67066 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 28824 tgcttctgctgctcgcgtcgg 28844
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gaccatcctgcttctgctgct 115 ||||||||||||||||||||| Sbjct: 1316932 gaccatcctgcttctgctgct 1316912
>emb|AM048832.1| Uncultured bacterium mercury resistance plasmid pTP6 Length = 54344 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 22430 tgcttctgctgctcgcgtcgg 22450
>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence Length = 99448 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgcttctgctgctcgcgtcgg 123 ||||||||||||||||||||| Sbjct: 19267 tgcttctgctgctcgcgtcgg 19287
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tggagccagcggcggcgacg 95 |||||||||||||||||||| Sbjct: 562 tggagccagcggcggcgacg 543
>gb|AC002990.1|HUAC002990 Human Chromosome 16 BAC clone CIT987SK-A-1000D7, complete sequence Length = 106760 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gtgagcagagcacctagcta 51 |||||||||||||||||||| Sbjct: 25134 gtgagcagagcacctagcta 25153
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 gcgtcggccgtggccgtgagcgcg 140 |||||||| ||||||||||||||| Sbjct: 185334 gcgtcggcggtggccgtgagcgcg 185357
>emb|CR594740.1| full-length cDNA clone CS0DI004YL21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1783 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gggggcgcggagagggcgcc 163 |||||||||||||||||||| Sbjct: 5 gggggcgcggagagggcgcc 24
>dbj|AB224689.1| Aspergillus oryzae cDNA, contig sequence: AoEST1538 Length = 804 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tcctgcttctgctgctcgcg 119 |||||||||||||||||||| Sbjct: 351 tcctgcttctgctgctcgcg 332
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 gcgtcggccgtggccgtgagcgcg 140 ||||||||||||||||| |||||| Sbjct: 469709 gcgtcggccgtggccgtcagcgcg 469732
>gb|AC027004.15| Homo sapiens chromosome 15, clone RP11-143C19, complete sequence Length = 181804 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 accatcctgcttctgctgct 115 |||||||||||||||||||| Sbjct: 89944 accatcctgcttctgctgct 89925
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tcctgcttctgctgctcgcg 119 |||||||||||||||||||| Sbjct: 2695481 tcctgcttctgctgctcgcg 2695500
>gb|AC008686.8| Homo sapiens chromosome 19 clone CTB-5E10, complete sequence Length = 150192 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gggggcgcggagagggcgcc 163 |||||||||||||||||||| Sbjct: 109901 gggggcgcggagagggcgcc 109920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gccagcggcggcgacgacca 99 |||||||||||||||||||| Sbjct: 20199077 gccagcggcggcgacgacca 20199058 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 33979393 cggcggcgacgaccatcct 33979411
>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence Length = 171048 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtgagcagagcacctagcta 51 |||||||||||||||||||| Sbjct: 5785 gtgagcagagcacctagcta 5766
>gb|AY105485.1| Zea mays PCO065024 mRNA sequence Length = 722 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ggccgtggccgtgagcgcgc 141 |||||||||||||||||||| Sbjct: 372 ggccgtggccgtgagcgcgc 391
>ref|NM_007111.3| Homo sapiens transcription factor Dp-1 (TFDP1), mRNA Length = 2385 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcggagagggcgc 162 ||||| |||||| |||||||||||||| Sbjct: 129 gcgcgggcggggacgcggagagggcgc 103
>ref|XM_511207.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC52282 (LOC454358), mRNA Length = 1635 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 554 ccatcctgcttctgctgct 572
>ref|XM_474246.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1545 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 508 cggcggcgacgaccatcct 490
>gb|DQ228319.1| Solanum tuberosum clone 131C06 beta-tubulin-like protein mRNA, complete cds Length = 1579 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 524 atccagtccctccaccaagtgag 502
>gb|DQ205342.1| Lycopersicon esculentum beta-tubulin (TUB) mRNA, complete cds Length = 1656 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 549 atccagtccctccaccaagtgag 527
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 3220441 cctgcttctgctgctcgcg 3220459
>ref|NM_190381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2376 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcgga 154 ||||||||||||||||||| Sbjct: 56 gcgcgcgcgggggcgcgga 38
>ref|NM_190376.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 205 cggcggcgacgaccatcct 187
>ref|XM_469748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1304 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 68 cctgcttctgctgctcgcg 86
>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence Length = 222121 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 cacctagctacctagggcc 60 ||||||||||||||||||| Sbjct: 102218 cacctagctacctagggcc 102236
>gb|AY422690.1| Nicotiana attenuata tissue-type shoot beta-tubulin (TUB) mRNA, complete cds Length = 1626 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 512 atccagtccctccaccaagtgag 490
>ref|NM_011438.1| Mus musculus SRY-box containing gene 12 (Sox12), mRNA Length = 4199 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 135 agcgcgcgcgggggcgcggagag 157 ||||||||||||| ||||||||| Sbjct: 16 agcgcgcgcggggccgcggagag 38
>gb|BT013065.1| Lycopersicon esculentum clone 114322R, mRNA sequence Length = 1633 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 547 atccagtccctccaccaagtgag 525
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 30532878 cctgcttctgctgctcgcg 30532896
>gb|U70844.1| Caenorhabditis elegans cosmid ZK154, complete sequence Length = 26547 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 atccagtacctccaccaagtgag 36 ||||||||||||| ||||||||| Sbjct: 4143 atccagtacctcctccaagtgag 4165
>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence Length = 212604 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 ccaggcatccatccagtac 22 ||||||||||||||||||| Sbjct: 207047 ccaggcatccatccagtac 207065
>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence Length = 197831 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 ccaggcatccatccagtac 22 ||||||||||||||||||| Sbjct: 122830 ccaggcatccatccagtac 122812
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 118 cgtcggccgtggccgtgagcgcg 140 |||||||||||||||| |||||| Sbjct: 2467134 cgtcggccgtggccgtcagcgcg 2467112
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 gcgacgaccatcctgcttc 108 ||||||||||||||||||| Sbjct: 70778 gcgacgaccatcctgcttc 70760
>emb|CR457452.12| Zebrafish DNA sequence from clone DKEY-52H10 in linkage group 8, complete sequence Length = 232104 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 132 gtgagcgcgcgcgggggcgcgga 154 |||||||||||||||| |||||| Sbjct: 157285 gtgagcgcgcgcggggacgcgga 157263
>emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chromosome X Contains the gene for a novel protein, a transmembrane 4 superfamily member 10 (TM4SF10) pseudogene, a transcription factor Dp-1 (TFDP1) pseudogene, a novel pseudogene and two ferritin, heavy polypeptide-like 17 (FTHL17) pseudogenes, complete sequence Length = 161540 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 144 gggggcgcggagagggcgc 162 ||||||||||||||||||| Sbjct: 114678 gggggcgcggagagggcgc 114660
>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the 5' end of the gene for FLJ10704 (FLJ20092), a novel gene, a novel gene (FLJ20623), the TFDP1 gene for transcription factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete sequence Length = 184889 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcggagagggcgc 162 ||||| |||||| |||||||||||||| Sbjct: 120581 gcgcgggcggggacgcggagagggcgc 120555
>emb|AL353629.22| Human DNA sequence from clone RP11-30L4 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene, two novel genes, the C9orf10 gene for chromosome 9 open reading frame 10, the 5' end of the PHF2 gene for PHD finger protein 2 and three CpG islands, complete sequence Length = 170845 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 127 tggccgtgagcgcgcgcgggggc 149 |||||| |||||||||||||||| Sbjct: 130138 tggccgggagcgcgcgcgggggc 130160
>emb|Z33402.1|STBETTUB2 S.tuberosum (TUBST2) mRNA for beta-tubulin Length = 1524 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 511 atccagtccctccaccaagtgag 489
>emb|Z33382.1|STBETTUB1 S.tuberosum (TUBST1) mRNA for beta-tubulin Length = 1557 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||| ||||||||||||||| Sbjct: 538 atccagtccctccaccaagtgag 516
>emb|X15242.1|CETUBUB Caenorhabditis elegans mec-7 gene for beta-tubulin Length = 2100 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||||||||| ||||||||| Sbjct: 947 atccagtacctcctccaagtgag 925
>gb|BC042597.1| Homo sapiens hypothetical protein MGC52282, mRNA (cDNA clone MGC:43030 IMAGE:4838935), complete cds Length = 2920 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 1035 ccatcctgcttctgctgct 1053
>gb|BC036601.1| Homo sapiens transcription factor Dp-1, mRNA (cDNA clone IMAGE:5274257) Length = 467 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcggagagggcgc 162 ||||| |||||| |||||||||||||| Sbjct: 142 gcgcgggcggggacgcggagagggcgc 116
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 30289 cggcggcgacgaccatcct 30307
>gb|BC067019.1| Mus musculus SRY-box containing gene 12, mRNA (cDNA clone MGC:90023 IMAGE:6833848), complete cds Length = 4199 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 135 agcgcgcgcgggggcgcggagag 157 ||||||||||||| ||||||||| Sbjct: 16 agcgcgcgcggggccgcggagag 38
>dbj|AK122946.1| Homo sapiens cDNA FLJ16659 fis, clone TESTI4041844, moderately similar to Mus musculus distal intestinal serine protease (Disp-pending) Length = 2850 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 927 ccatcctgcttctgctgct 945
>gb|AY113386.1| Drosophila melanogaster RE05302 full insert cDNA Length = 1408 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 atcctgcttctgctgctcg 117 ||||||||||||||||||| Sbjct: 433 atcctgcttctgctgctcg 415
>ref|NM_141906.2| Drosophila melanogaster CG4860-RA (CG4860), mRNA Length = 1396 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 atcctgcttctgctgctcg 117 ||||||||||||||||||| Sbjct: 433 atcctgcttctgctgctcg 415
>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163198 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gaccatcctgcttctgctg 113 ||||||||||||||||||| Sbjct: 117813 gaccatcctgcttctgctg 117831
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 64451 cctgcttctgctgctcgcg 64469
>gb|AY060960.1| Drosophila melanogaster GM09085 full length cDNA Length = 1401 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 atcctgcttctgctgctcg 117 ||||||||||||||||||| Sbjct: 413 atcctgcttctgctgctcg 395
>gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 5 mRNA, complete cds Length = 1731 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 544 cggcggcgacgaccatcct 526
>ref|NM_076912.2| Caenorhabditis elegans MEChanosensory abnormality family member (mec-7) (mec-7) mRNA, complete cds Length = 1554 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 atccagtacctccaccaagtgag 36 ||||||||||||| ||||||||| Sbjct: 549 atccagtacctcctccaagtgag 527
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 gtgagcgcgcgcgggggcg 150 ||||||||||||||||||| Sbjct: 101800 gtgagcgcgcgcgggggcg 101818
>gb|AC148694.1| Macaca mulatta Major Histocompatibility Complex BAC MMU242A19, complete sequence Length = 208276 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 gtgagcgcgcgcgggggcg 150 ||||||||||||||||||| Sbjct: 16777 gtgagcgcgcgcgggggcg 16795
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 93 acgaccatcctgcttctgctgct 115 |||||||||||||| |||||||| Sbjct: 25305543 acgaccatcctgctactgctgct 25305565
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 30624300 cctgcttctgctgctcgcg 30624318
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcgga 154 ||||||||||||||||||| Sbjct: 35149755 gcgcgcgcgggggcgcgga 35149737 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 35128855 cggcggcgacgaccatcct 35128837 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 gagccagcggcggcgacga 96 ||||||||||||||||||| Sbjct: 4290592 gagccagcggcggcgacga 4290610
>ref|NM_178453.2| Homo sapiens hypothetical protein MGC52282 (MGC52282), mRNA Length = 712 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 137 ccatcctgcttctgctgct 155
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 gtgagcgcgcgcgggggcg 150 ||||||||||||||||||| Sbjct: 1525725 gtgagcgcgcgcgggggcg 1525707
>gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR30N15, complete sequence Length = 178199 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 atcctgcttctgctgctcg 117 ||||||||||||||||||| Sbjct: 77217 atcctgcttctgctgctcg 77235
>gb|AF299085.1|AF299085 Myxococcus xanthus Bap1 (bap1) gene, complete cds Length = 3406 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 ggccgtggccgtgagcgcg 140 ||||||||||||||||||| Sbjct: 2226 ggccgtggccgtgagcgcg 2244
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcgga 154 ||||||||||||||||||| Sbjct: 28839 gcgcgcgcgggggcgcgga 28821 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 7939 cggcggcgacgaccatcct 7921
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 134 gagcgcgcgcgggggcgcg 152 ||||||||||||||||||| Sbjct: 2003467 gagcgcgcgcgggggcgcg 2003485
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 cggcggcgacgaccatcct 103 ||||||||||||||||||| Sbjct: 136005 cggcggcgacgaccatcct 135987
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 gagccagcggcggcgacga 96 ||||||||||||||||||| Sbjct: 70362 gagccagcggcggcgacga 70380
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 93 acgaccatcctgcttctgctgct 115 |||||||||||||| |||||||| Sbjct: 124151 acgaccatcctgctactgctgct 124173
>emb|AL928568.17| Mouse DNA sequence from clone RP23-396N8 on chromosome 2, complete sequence Length = 98566 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 135 agcgcgcgcgggggcgcggagag 157 ||||||||||||| ||||||||| Sbjct: 72111 agcgcgcgcggggccgcggagag 72089
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 cgcgcgcgggggcgcggag 155 ||||||||||||||||||| Sbjct: 2488336 cgcgcgcgggggcgcggag 2488318
>gb|BC041609.1| Homo sapiens hypothetical protein MGC52282, mRNA (cDNA clone MGC:52282 IMAGE:5484645), complete cds Length = 712 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 137 ccatcctgcttctgctgct 155
>gb|BC011685.2| Homo sapiens transcription factor Dp-1, mRNA (cDNA clone MGC:19534 IMAGE:4111289), complete cds Length = 2385 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 136 gcgcgcgcgggggcgcggagagggcgc 162 ||||| |||||| |||||||||||||| Sbjct: 129 gcgcgggcggggacgcggagagggcgc 103
>dbj|AK061165.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A07, full insert sequence Length = 1402 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cctgcttctgctgctcgcg 119 ||||||||||||||||||| Sbjct: 151 cctgcttctgctgctcgcg 169
>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence Length = 225655 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 atcctgcttctgctgctcg 117 ||||||||||||||||||| Sbjct: 17000 atcctgcttctgctgctcg 17018
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 128 ggccgtgagcgcgcgcgggggcg 150 ||||| ||||||||||||||||| Sbjct: 1087905 ggccgggagcgcgcgcgggggcg 1087927
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 97 ccatcctgcttctgctgctcgcg 119 ||||||| ||||||||||||||| Sbjct: 23258 ccatcctacttctgctgctcgcg 23236
>gb|AC003965.1|AC003965 Homo sapiens chromosome 16, cosmid clone 325D7, complete sequence Length = 34642 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccatcctgcttctgctgct 115 ||||||||||||||||||| Sbjct: 31910 ccatcctgcttctgctgct 31928 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,301,504 Number of Sequences: 3902068 Number of extensions: 1301504 Number of successful extensions: 115138 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112740 Number of HSP's gapped (non-prelim): 2398 length of query: 174 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 152 effective length of database: 17,147,199,772 effective search space: 2606374365344 effective search space used: 2606374365344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)