>ref|XM_470405.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1277

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 103 ccccgcgcggtggctcgtggagg 125
           |||||||||||||||||||||||
Sbjct: 171 ccccgcgcggtggctcgtggagg 193

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 103      ccccgcgcggtggctcgtggagg 125
                |||||||||||||||||||||||
Sbjct: 35266985 ccccgcgcggtggctcgtggagg 35266963

>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 103    ccccgcgcggtggctcgtggagg 125
              |||||||||||||||||||||||
Sbjct: 145746 ccccgcgcggtggctcgtggagg 145724

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 103      ccccgcgcggtggctcgtggagg 125
                |||||||||||||||||||||||
Sbjct: 35357057 ccccgcgcggtggctcgtggagg 35357035

>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
              sequence
          Length = 116443

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 103    ccccgcgcggtggctcgtggagg 125
              |||||||||||||||||||||||
Sbjct: 101469 ccccgcgcggtggctcgtggagg 101491

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 260   ggccgaggcgcggcggctgcgtctcg 285
             ||||||||||||||||||||| ||||
Sbjct: 47018 ggccgaggcgcggcggctgcgcctcg 47043

>ref|XM_530253.1| PREDICTED: Pan troglodytes LOC457989 (LOC457989), mRNA
          Length = 955

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 agcgggccgaggcgcggcggc 276
           |||||||||||||||||||||
Sbjct: 235 agcgggccgaggcgcggcggc 255

>ref|XM_362049.1| Magnaporthe grisea 70-15 hypothetical protein (MG04494.4) partial cds
          Length = 2097

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 254  gcagcgggccgaggcgcggcg 274
            |||||||||||||||||||||
Sbjct: 1534 gcagcgggccgaggcgcggcg 1514

>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034O04, complete sequence
          Length = 164882

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 4     ccccccgcgtcgctccctcgcaggcgactcggg 36
             ||||||||||||| ||| |||||||||| ||||
Sbjct: 46061 ccccccgcgtcgcccccgcgcaggcgacacggg 46093

>gb|AY028431.1| Burkholderia cepacia genomovar III putative type III secretion gene
             cluster, complete sequence
          Length = 34600

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   ggccgaggcgcggcggctgcg 280
             |||||||||||||||||||||
Sbjct: 22437 ggccgaggcgcggcggctgcg 22417

>ref|XM_926026.1| PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting
            protein isoform 2 (LOC642537), mRNA
          Length = 4629

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 256  agcgggccgaggcgcggcggc 276
            |||||||||||||||||||||
Sbjct: 1586 agcgggccgaggcgcggcggc 1566

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 4       ccccccgcgtcgctccctcgcaggcgactcggg 36
               ||||||||||||| ||| |||||||||| ||||
Sbjct: 5836177 ccccccgcgtcgcccccgcgcaggcgacacggg 5836209

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    ggccgaggcgcggcggctgcg 280
              |||||||||||||||||||||
Sbjct: 814898 ggccgaggcgcggcggctgcg 814878

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  ggccgaggcgcggcggctgcg 280
            |||||||||||||||||||||
Sbjct: 1129 ggccgaggcgcggcggctgcg 1149

>emb|BX538005.1|HSM806143 Homo sapiens mRNA; cDNA DKFZp686C1532 (from clone DKFZp686C1532)
          Length = 5640

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 agcgggccgaggcgcggcggc 276
           |||||||||||||||||||||
Sbjct: 184 agcgggccgaggcgcggcggc 204

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 4       ccccccgcgtcgctccctcgcaggcgactcggg 36
               ||||||||||||| ||| |||||||||| ||||
Sbjct: 5902654 ccccccgcgtcgcccccgcgcaggcgacacggg 5902686

>gb|BC108978.1| Mus musculus solute carrier family 6 (neurotransmitter transporter,
           serotonin), member 4, mRNA (cDNA clone MGC:124313
           IMAGE:40047534), complete cds
          Length = 2342

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gtggaggggccttcctcctc 138
           ||||||||||||||||||||
Sbjct: 508 gtggaggggccttcctcctc 527

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tcagcgtggcagcgtcgagg 254
              ||||||||||||||||||||
Sbjct: 179319 tcagcgtggcagcgtcgagg 179338

>gb|AY320035.2| Bacteriophage VWB, complete genome
          Length = 49220

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   agcgggccgaggcgcggcggctgc 279
             ||||||||| ||||||||||||||
Sbjct: 14930 agcgggccgcggcgcggcggctgc 14953

>ref|XM_427412.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal
           receptor 2 (LOC429857), partial mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 gaggcgcggcggctgcgtct 283
           ||||||||||||||||||||
Sbjct: 172 gaggcgcggcggctgcgtct 191

>ref|XM_414464.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal
           receptor c02 (LOC416131), mRNA
          Length = 9674

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 gaggcgcggcggctgcgtct 283
           ||||||||||||||||||||
Sbjct: 364 gaggcgcggcggctgcgtct 383

>ref|NM_010484.1| Mus musculus solute carrier family 6 (neurotransmitter transporter,
           serotonin), member 4 (Slc6a4), mRNA
          Length = 2744

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gtggaggggccttcctcctc 138
           ||||||||||||||||||||
Sbjct: 524 gtggaggggccttcctcctc 543

>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence
          Length = 187517

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 96978 gaggcgcggcggctgcgtct 96997



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 78734 gaggcgcggcggctgcgtct 78753



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 69709 gaggcgcggcggctgcgtct 69728



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 63286 gaggcgcggcggctgcgtct 63305



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 53841 gaggcgcggcggctgcgtct 53860



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 43967 gaggcgcggcggctgcgtct 43986



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 33581 gaggcgcggcggctgcgtct 33600



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 24768 gaggcgcggcggctgcgtct 24787



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 18325 gaggcgcggcggctgcgtct 18344



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  gaggcgcggcggctgcgtct 283
            ||||||||||||||||||||
Sbjct: 7964 gaggcgcggcggctgcgtct 7983



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 gaggcgcggcggctgcgtct 283
           ||||||||||||||||||||
Sbjct: 172 gaggcgcggcggctgcgtct 191

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     gcgggccgaggcgcggcggc 276
               ||||||||||||||||||||
Sbjct: 2907149 gcgggccgaggcgcggcggc 2907168

>gb|AC015849.5| Homo sapiens chromosome 17, clone RP11-362K1, complete sequence
          Length = 205040

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aggggccttcctcctctctc 142
              ||||||||||||||||||||
Sbjct: 180520 aggggccttcctcctctctc 180501

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 348     tcgtcggcctcctgctggcctgccggat 375
               |||||| |||||||||||||| ||||||
Sbjct: 5432197 tcgtcgacctcctgctggcctcccggat 5432170

>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence
          Length = 227950

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 253   ggcagcgggccgaggcgcggcggctgcg 280
             |||||||||| |||| ||||||||||||
Sbjct: 92529 ggcagcgggcggaggggcggcggctgcg 92502

>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10)
          Length = 98944

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaggcgcggcggctgcgtct 283
             ||||||||||||||||||||
Sbjct: 18519 gaggcgcggcggctgcgtct 18538



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 gaggcgcggcggctgcgtct 283
           ||||||||||||||||||||
Sbjct: 275 gaggcgcggcggctgcgtct 294

>gb|AF013604.1|AF013604 Mus musculus serotonin transporter mRNA, complete cds
          Length = 2576

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gtggaggggccttcctcctc 138
           ||||||||||||||||||||
Sbjct: 339 gtggaggggccttcctcctc 358

>gb|AC006237.1|AC006237 Homo sapiens chromosome 17, clone hRPC.161_P_9, complete sequence
          Length = 82166

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   aggggccttcctcctctctc 142
             ||||||||||||||||||||
Sbjct: 49283 aggggccttcctcctctctc 49264

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     gcgggccgaggcgcggcggc 276
               ||||||||||||||||||||
Sbjct: 1190191 gcgggccgaggcgcggcggc 1190210

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 369     gccggatctggcgagggggttggc 392
               ||||||||||||||||| ||||||
Sbjct: 2082933 gccggatctggcgagggagttggc 2082956

>gb|BC108979.1| Mus musculus solute carrier family 6 (neurotransmitter transporter,
           serotonin), member 4, mRNA (cDNA clone MGC:124314
           IMAGE:40047537), complete cds
          Length = 2342

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gtggaggggccttcctcctc 138
           ||||||||||||||||||||
Sbjct: 508 gtggaggggccttcctcctc 527

>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence
          Length = 237824

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 253    ggcagcgggccgaggcgcggcggctgcg 280
              |||||||||| |||| ||||||||||||
Sbjct: 175433 ggcagcgggcggaggggcggcggctgcg 175406

>emb|X66119.1|MMSEROT M.musculus mRNA for serotonin transporter, partial
          Length = 2357

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gtggaggggccttcctcctc 138
           ||||||||||||||||||||
Sbjct: 134 gtggaggggccttcctcctc 153


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,243,695
Number of Sequences: 3902068
Number of extensions: 2243695
Number of successful extensions: 52371
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51913
Number of HSP's gapped (non-prelim): 458
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)