ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast43e02 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 64.7 bits (156), Expect = 5e-11 Identities = 32/62 (51%), Positives = 37/62 (59%) Frame = -3 Query: 198 CSLSVSRPYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSRGLGPGPS 19 CSLSVSR YLALDG+Y P+ AAFPNN TR P TG SPS S+ GP+ Sbjct: 31 CSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCSKEHRQGPA 90 Query: 18 LR 13 + Sbjct: 91 TK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 58.9 bits (141), Expect = 3e-09 Identities = 29/53 (54%), Positives = 33/53 (62%) Frame = -3 Query: 198 CSLSVSRPYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSR 40 CSLSVSR YLALDG+Y P+ AAFPNN T + P TG SPS S+ Sbjct: 46 CSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCSK 98
>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)| Length = 201 Score = 53.5 bits (127), Expect = 1e-07 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +3 Query: 264 GERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 G+R KGTVKWF+ KGFGFI+P DG DDLF Sbjct: 12 GDRRKGTVKWFDTQKGFGFITPSDGGDDLF 41
>GRP2_NICSY (P27484) Glycine-rich protein 2| Length = 214 Score = 52.8 bits (125), Expect = 2e-07 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +3 Query: 264 GERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 G+R KGTVKWF+ KGFGFI+P+DG +DLF Sbjct: 6 GQRAKGTVKWFSDQKGFGFITPDDGGEDLF 35
>CSPE_SHIFL (P0A975) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_ECOLI (P0A972) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_ECOL6 (P0A973) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_ECO57 (P0A974) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_BUCBP (Q89A90) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_BUCAP (P63238) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CSPE_BUCAI (P63237) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+PEDGS D+F Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVF 29
>CAPA_PSEFR (P72188) Cold shock protein capA (Cold acclimation protein A)| (C7.0) (Fragment) Length = 64 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/31 (67%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M +R GTVKWFN KGFGFI+P+ G DDLF Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLF 31
>Y4CH_RHISN (P55390) Probable cold shock protein y4cH| Length = 69 Score = 49.7 bits (117), Expect = 2e-06 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN TKGFGFI P+DGS D+F Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVF 29
>CSPA_MYCTU (P63848) Probable cold shock protein A| Length = 67 Score = 49.3 bits (116), Expect = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI+PEDGS D+F Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVF 28
>CSPA_MYCBO (P63849) Probable cold shock protein A| Length = 67 Score = 49.3 bits (116), Expect = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI+PEDGS D+F Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVF 28
>CSPC_BUCAI (P57407) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.9 bits (115), Expect = 3e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPSDGSKDVF 29
>CSPG_SHIFL (P0A981) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVF 31
>CSPG_ECOLI (P0A978) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVF 31
>CSPG_ECOL6 (P0A979) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVF 31
>CSPG_ECO57 (P0A980) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVF 31
>CSPC_SHIFL (Q83RI9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPC_SALTY (P0A9Y9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPC_SALTI (P0A9Z0) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPC_ECOLI (P0A9Y6) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPC_ECOL6 (P0A9Y7) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPC_ECO57 (P0A9Y8) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++KG VKWFN +KGFGFI+P DGS D+F Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVF 29
>CSPB_ECOLI (P36995) Cold shock-like protein cspB (CSP-B)| Length = 71 Score = 48.1 bits (113), Expect = 5e-06 Identities = 20/31 (64%), Positives = 23/31 (74%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFISP DGS D+F Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVF 31
>CSPA_RHIME (Q9Z3S6) Cold shock protein cspA| Length = 69 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN TKGFGFI P+DG+ D+F Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVF 28
>CSPI_ECOLI (P0A986) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 47.4 bits (111), Expect = 9e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVF 31
>CSPI_ECOL6 (P0A987) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 47.4 bits (111), Expect = 9e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVF 31
>CSPJ_SALTY (P39818) Cold shock-like protein cspJ| Length = 70 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVF 31
>CSPJ_SALTI (P58726) Cold shock-like protein cspJ| Length = 70 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVF 31
>CSPD_SHIFL (P0A971) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 KGTVKWFN KGFGFI PE G +D+F Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIF 28
>CSPD_ECOLI (P0A968) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 KGTVKWFN KGFGFI PE G +D+F Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIF 28
>CSPD_ECOL6 (P0A969) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 KGTVKWFN KGFGFI PE G +D+F Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIF 28
>CSPD_ECO57 (P0A970) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 KGTVKWFN KGFGFI PE G +D+F Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIF 28
>CSPA_VIBCH (Q9KN00) Cold shock-like protein cspA| Length = 70 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M +++ G+VKWFN TKGFGFIS ++G D+F Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVF 31
>CSPA_SHIFL (P0A9Y4) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_SALTY (P0A9Y2) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_SALTI (P0A9Y3) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_SALEN (P0A9Y5) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_ECOLI (P0A9X9) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_ECOL6 (P0A9Y0) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPA_ECO57 (P0A9Y1) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +3 Query: 270 RVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ G VKWFN KGFGFI+P+DGS D+F Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVF 30
>CSPB_YERPE (P0A362) Cold shock-like protein cspB| Length = 70 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWF+ KGFGFISP DGS D+F Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVF 31
>CSPB_YEREN (P0A363) Cold shock-like protein cspB| Length = 70 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G VKWF+ KGFGFISP DGS D+F Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVF 31
>CSPA_PSEAE (P95459) Major cold shock protein cspA| Length = 69 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSD 344 M R GTVKWFN KGFGFI+PE G+D Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGND 28
>TAPB_PSEFR (P72192) Temperature acclimation protein B (E8.0) (Fragment)| Length = 63 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSD 344 M +R GTVKWFN KGFGFI+PE G D Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESGPD 28
>CSPA_MICLU (O30875) Major cold shock protein| Length = 67 Score = 45.4 bits (106), Expect = 3e-05 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KG+GFI+PED S D+F Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVF 28
>CAPB_PSESM (P0A105) Cold shock protein capB (Cold acclimation protein B)| Length = 69 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/31 (67%), Positives = 23/31 (74%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M R GTVKWFN KGFGFI+P+ G DDLF Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLF 30
>CAPB_PSEFR (P0A106) Cold shock protein capB (Cold acclimation protein B)| (C8.0) Length = 69 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/31 (67%), Positives = 23/31 (74%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M R GTVKWFN KGFGFI+P+ G DDLF Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLF 30
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 44.7 bits (104), Expect = 6e-05 Identities = 30/116 (25%), Positives = 42/116 (36%) Frame = +3 Query: 6 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 +A AT AP A + DP AP+ V P + Sbjct: 3 EAGEATTTTTTTLPQAPTEAAAAAPQDP-APKSPVGSGAPQAAAPAPAAHVAGNPGGDAA 61 Query: 186 PIANSHHTDLGFPARVLVLRFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 P A ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 62 PAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVF 117
>CSP_ARTGO (P54584) Cold shock protein| Length = 67 Score = 44.7 bits (104), Expect = 6e-05 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI+P+D D+F Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVF 28
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 43.9 bits (102), Expect = 1e-04 Identities = 31/97 (31%), Positives = 42/97 (43%) Frame = +3 Query: 63 VRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPARVLVL 242 V P+G +P G G P +G L G R N G PA Sbjct: 30 VPVPAG-EPQKAGGGAGGGGGAASGPAAGTPLHA---PGPRTPGNQATAASGTPAPPARS 85 Query: 243 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 + + + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 86 QADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVF 122
>CSPV_VIBCH (Q9KL16) Cold shock protein cspV| Length = 70 Score = 43.9 bits (102), Expect = 1e-04 Identities = 16/31 (51%), Positives = 25/31 (80%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M ++ G+VKWFN TKGFGF++ ++G +D+F Sbjct: 1 MSTKMTGSVKWFNETKGFGFLTQDNGGNDVF 31
>YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-binding protein| p54) (mRNP3) Length = 324 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +3 Query: 243 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 + ++ + +V+GTVKWFNV G+GFI+ D +D+F Sbjct: 32 QINKKLLATQVQGTVKWFNVRNGYGFINRNDSKEDVF 68
>CSPA_BORPE (P0A352) Cold shock-like protein cspA| Length = 67 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KG+GFI+PE G DLF Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLF 28
>CSPA_BORPA (P0A354) Cold shock-like protein cspA| Length = 67 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KG+GFI+PE G DLF Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLF 28
>CSPA_BORBR (P0A353) Cold shock-like protein cspA| Length = 67 Score = 42.7 bits (99), Expect = 2e-04 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KG+GFI+PE G DLF Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLF 28
>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein| p56) (mRNP4) Length = 336 Score = 42.4 bits (98), Expect = 3e-04 Identities = 16/34 (47%), Positives = 25/34 (73%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V+GTVKWFNV G+GFI+ D +D+F Sbjct: 35 KKVLATQVQGTVKWFNVRNGYGFINRNDTKEDVF 68
>CSPG_SHEVI (Q9S170) Cold shock-like protein cspG| Length = 70 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M G VKWFN KGFGFI+ ++G DD+F Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVF 31
>CSP2_LACPL (P96349) Cold shock protein 2| Length = 66 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 GTVKWFN KGFGFI+ EDG+D Sbjct: 4 GTVKWFNADKGFGFITGEDGTD 25
>YBOXH_APLCA (P41824) Y-box factor homolog (APY1)| Length = 253 Score = 42.4 bits (98), Expect = 3e-04 Identities = 16/34 (47%), Positives = 25/34 (73%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ +D +D+F Sbjct: 26 KKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVF 59
>CSPA_STRP8 (P0A361) Major cold shock protein| Length = 67 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +GTVKWFN KGFGFIS E+G D Sbjct: 3 QGTVKWFNAEKGFGFISTENGQD 25
>CSPA_STRP6 (Q5X9L4) Major cold shock protein| Length = 67 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +GTVKWFN KGFGFIS E+G D Sbjct: 3 QGTVKWFNAEKGFGFISTENGQD 25
>CSPA_STRP3 (P0A360) Major cold shock protein| Length = 67 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +GTVKWFN KGFGFIS E+G D Sbjct: 3 QGTVKWFNAEKGFGFISTENGQD 25
>CSPA_STRP1 (P0C0F1) Major cold shock protein| Length = 67 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +GTVKWFN KGFGFIS E+G D Sbjct: 3 QGTVKWFNAEKGFGFISTENGQD 25
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVF 109
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVF 109
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVF 109
>YB3_XENLA (Q00436) B box-binding protein (Protein YB3)| Length = 305 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 63
>CSPA_STIAU (P72366) Cold shock-like protein cspA| Length = 68 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI+ + G +D+F Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVF 28
>CSP1_LACPL (P71478) Cold shock protein 1| Length = 66 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 GTVKWFN KG+GFI+ EDG+D Sbjct: 4 GTVKWFNADKGYGFITGEDGND 25
>YBOX1_XENLA (P21573) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 303 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 63
>YBOX1_RABIT (Q28618) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (p50) Length = 323 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 84
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 84
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 84
>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (Contrin) (MSY2 homolog) Length = 364 Score = 41.2 bits (95), Expect = 6e-04 Identities = 27/84 (32%), Positives = 36/84 (42%) Frame = +3 Query: 102 GAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPARVLVLRFRRRKMGERVKG 281 G G P +G P G R N G PA + + + +V G Sbjct: 41 GGAGGGGGAASGPAAGTPSAP----GSRTPGNPATAVSGTPAPPARSQADKPVLAIQVLG 96 Query: 282 TVKWFNVTKGFGFISPEDGSDDLF 353 TVKWFNV G+GFI+ D +D+F Sbjct: 97 TVKWFNVRNGYGFINRNDTKEDVF 120
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 82
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 82
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 41.2 bits (95), Expect = 6e-04 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++ + +V GTVKWFNV G+GFI+ D +D+F Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVF 82
>CSPD_VIBCH (Q9KSW4) Cold shock-like protein cspD| Length = 76 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/25 (68%), Positives = 18/25 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI PE D+F Sbjct: 7 GTVKWFNNAKGFGFICPEGEDGDIF 31
>CSP7_STRCL (Q01761) Cold shock-like protein 7.0| Length = 66 Score = 40.8 bits (94), Expect = 8e-04 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI+ + G D+F Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVF 28
>CSPC_BACSU (P39158) Cold shock protein cspC| Length = 66 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI E+G DD+F Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVF 27
>CSPC_BACCR (P62171) Cold shock-like protein cspC| Length = 65 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++G VKWFN KGFGFI EDG DD+F Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVF 26
>CSPC_BACCE (P62170) Cold shock-like protein cspC| Length = 65 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++G VKWFN KGFGFI EDG DD+F Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVF 26
>CSPC_BACAN (P62169) Cold shock-like protein cspC| Length = 65 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++G VKWFN KGFGFI EDG DD+F Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVF 26
>CSPA_SHEVI (Q9S1B7) Cold shock-like protein cspA| Length = 70 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M + GTVKWFN KGFGF++ ++G D+F Sbjct: 1 MSDSNTGTVKWFNEDKGFGFLTQDNGGADVF 31
>CSPA_LISMO (P0A355) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI E+G DD+F Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVF 27
>CSPA_LISIN (P0A356) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 40.4 bits (93), Expect = 0.001 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWFN KGFGFI E+G DD+F Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVF 27
>CSPF_STRCO (P48859) Cold shock protein scoF| Length = 67 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI+ + G D+F Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVF 28
>CSPB_LISMO (P0A357) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/25 (72%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI E G DD+F Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVF 27
>CSPB_LISIN (P0A358) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/25 (72%), Positives = 19/25 (76%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 GTVKWFN KGFGFI E G DD+F Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVF 27
>CSPA_RICPR (Q9ZCP9) Cold shock-like protein cspA| Length = 70 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M + G VKW+N TK FGFI ++G D+F Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVF 31
>CSPA_RICCN (Q92GV1) Cold shock-like protein cspA| Length = 70 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 M + G VKW+N TK FGFI ++G D+F Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVF 31
>CSP_AQUAE (O67327) Cold shock-like protein| Length = 70 Score = 38.1 bits (87), Expect = 0.005 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSDDLF 353 +GTVKWF+ KG+GFI+ ED + D+F Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVF 29
>CSPS_STRTR (P81622) Cold shock protein CspSt (Fragment)| Length = 21 Score = 37.7 bits (86), Expect = 0.007 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPED 335 GTVKWFN KGFGFI+ ED Sbjct: 3 GTVKWFNAEKGFGFITSED 21
>CSPE_BACCE (Q45100) Cold shock-like protein cspE (Fragment)| Length = 54 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/22 (72%), Positives = 16/22 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 G VKWFN KGFGFI DGSD Sbjct: 5 GKVKWFNSEKGFGFIEVADGSD 26
>CSPB_BACSU (P32081) Cold shock protein cspB (Major cold shock protein)| Length = 67 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 ++G VKWFN KGFGFI E G DD+F Sbjct: 2 LEGKVKWFNSEKGFGFIEVE-GQDDVF 27
>CSDC2_RAT (Q63430) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F+ ++G GFI+PE+GS+D+F Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIF 96
>CSDC2_MOUSE (Q91YQ3) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F+ ++G GFI+PE+GS+D+F Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIF 96
>CSDC2_HUMAN (Q9Y534) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 153 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F+ ++G GFI+PE+GS+D+F Sbjct: 62 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIF 95
>CSPE_BACCR (Q81DK5) Cold shock-like protein cspE| Length = 67 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/22 (68%), Positives = 16/22 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 G VKWFN KGFGFI DG+D Sbjct: 5 GKVKWFNSEKGFGFIEVADGND 26
>CSPD_HAEIN (P46449) Cold shock-like protein cspD| Length = 72 Score = 36.6 bits (83), Expect = 0.016 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KGFGFIS E D+F Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIF 28
>CSPD_BACCR (Q816H3) Cold shock-like protein cspD| Length = 66 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/25 (68%), Positives = 18/25 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KGFGFI E G DD+F Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVF 27
>CSPD_BACAN (Q81K90) Cold shock-like protein cspD| Length = 66 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/25 (68%), Positives = 18/25 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KGFGFI E G DD+F Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVF 27
>CSPB_BACST (P42016) Cold shock protein cspB (Major cold shock protein)| Length = 66 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +G VKWFN KG+GFI E GSD Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGSD 25
>CSPB_BACCL (P41016) Cold shock protein cspB| Length = 66 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +3 Query: 276 KGTVKWFNVTKGFGFISPEDGSD 344 +G VKWFN KG+GFI E GSD Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGSD 25
>CSPB_BACCE (Q45097) Cold shock-like protein cspB| Length = 65 Score = 36.6 bits (83), Expect = 0.016 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 + G VKWFN KGFGFI E GS+D+F Sbjct: 1 MNGKVKWFNNEKGFGFIEME-GSEDVF 26
>CSPE_BACAN (Q81QK2) Cold shock-like protein cspE| Length = 67 Score = 36.2 bits (82), Expect = 0.020 Identities = 15/22 (68%), Positives = 16/22 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 G VKWFN KGFGFI E G+D Sbjct: 5 GKVKWFNSEKGFGFIEVEGGND 26
>CSPD_BACSU (P51777) Cold shock protein cspD| Length = 66 Score = 36.2 bits (82), Expect = 0.020 Identities = 17/25 (68%), Positives = 18/25 (72%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSDDLF 353 G VKWFN KGFGFI E G DD+F Sbjct: 4 GKVKWFNNEKGFGFIEVE-GGDDVF 27
>CSPD_BACCE (Q45099) Cold shock-like protein cspD| Length = 66 Score = 35.4 bits (80), Expect = 0.035 Identities = 15/22 (68%), Positives = 15/22 (68%) Frame = +3 Query: 279 GTVKWFNVTKGFGFISPEDGSD 344 G VKWFN KGFGFI E G D Sbjct: 4 GKVKWFNGEKGFGFIEVEGGED 25
>CT086_HUMAN (Q9BZ19) Hypothetical protein C20orf86| Length = 240 Score = 35.0 bits (79), Expect = 0.045 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPA 227 GA R+P G P+ A+ S C+ + + G + R GE PI+ +H + Sbjct: 138 GASCLSRSPLGRTPLHVAAAMGRSDCIILLLQHGASIHDRDAKGETPISIAHRLNHTLSE 197 Query: 228 RVLVLRFRRRKMGER 272 R +VL R K G R Sbjct: 198 RQMVLLHRIAKSGIR 212
>CSP_THEMA (O54310) Cold shock-like protein| Length = 66 Score = 34.7 bits (78), Expect = 0.059 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSD 344 ++G VKWF+ KG+GFI+ ++G D Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD 24
>CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F +KG GFI+P DG D+F Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIF 89
>CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F +KG GFI+P DG D+F Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIF 89
>CSPB_BACGO (P41018) Cold shock protein cspB (Fragment)| Length = 57 Score = 34.3 bits (77), Expect = 0.078 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +3 Query: 285 VKWFNVTKGFGFISPEDGSDDLF 353 +KWFN KGFGFI E G DD+F Sbjct: 1 IKWFNSEKGFGFIEVE-GQDDVF 22
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 34.3 bits (77), Expect = 0.078 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRLRP 164 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 165 RLNTGERPIANSHHT 209 R E+ A HT Sbjct: 2387 RPPPSEQRKAEPGHT 2401
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.078 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 107 RASWGDRVRAGRGSHPPRRPFPGDL 33 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.078 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 107 RASWGDRVRAGRGSHPPRRPFPGDL 33 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 148 Score = 34.3 bits (77), Expect = 0.078 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 252 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 R G KG K F +KG GFI+P DG D+F Sbjct: 57 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIF 90
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 33.5 bits (75), Expect = 0.13 Identities = 31/109 (28%), Positives = 36/109 (33%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSEQP 202 GPGP P RG P P P RG R G G GR P G Sbjct: 697 GPGPGPYHRGRGGRGGNEPPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG---GGGHR 753 Query: 203 PHRSRVSC*GFSPSFSAAQDGGESEGNREVVQRHQGVRLHLPGGRQRRP 349 PH G S + G G+ + H+G + GG RP Sbjct: 754 PHEGPGGGMGNSSGHRPHEGPGSGMGSGH--RPHEGPGSSMGGGGGHRP 800
>FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:| Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synth Length = 1885 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = +3 Query: 150 GRLRPRLNTGERPIANSHHTDLGFPARVLVLRFRRRKMGERVKGTVKW 293 GR P G A HH +L +P+ +L +++R+R++ +R++ W Sbjct: 1414 GRSVPAPGKGILTTAREHHGNLKYPSPLLNIKYRKRQLNKRLEQIKSW 1461
>CSPA_KLEPN (Q48493) Major cold shock protein (Fragment)| Length = 46 Score = 33.1 bits (74), Expect = 0.17 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +3 Query: 303 TKGFGFISPEDGSDDLF 353 +KGFGFISP+DGS D+F Sbjct: 1 SKGFGFISPKDGSKDVF 17
>CSPA_BACCR (Q81GQ6) Major cold shock protein cspA| Length = 67 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 V G VKWFN KGFGFI G +D+F Sbjct: 3 VTGQVKWFNNEKGFGFIE-VPGENDVF 28
>CSPA_BACCE (Q45096) Major cold shock protein cspA| Length = 67 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 V G VKWFN KGFGFI G +D+F Sbjct: 3 VTGQVKWFNNEKGFGFIE-VPGENDVF 28
>CSPA_BACAN (Q81TW8) Major cold shock protein cspA| Length = 67 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +3 Query: 273 VKGTVKWFNVTKGFGFISPEDGSDDLF 353 V G VKWFN KGFGFI G +D+F Sbjct: 3 VTGQVKWFNNEKGFGFIE-VPGENDVF 28
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 33.1 bits (74), Expect = 0.17 Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 2/111 (1%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSEQP 202 GPGP P RG G P P P RG R G G GR P G Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG---GGGHR 752 Query: 203 PHRSRVSC*GFSPSFSAAQ--DGGESEGNREVVQRHQGVRLHLPGGRQRRP 349 PH G S + GG G+R H+G + GG RP Sbjct: 753 PHEGPGGGMGNSSGHRPHEGPGGGMGSGHRP----HEGPGGSMGGGGGHRP 799
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 32.3 bits (72), Expect = 0.29 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 182 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 982 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1037 Query: 183 RPIA 194 R IA Sbjct: 1038 RGIA 1041 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 130 PKQPDSLTAPRGATGS-GPDGALTLPGA 50 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 GAPG AP P P P G +G LG + ++G Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 388
>ZN418_HUMAN (Q8TF45) Zinc finger protein 418| Length = 676 Score = 32.3 bits (72), Expect = 0.29 Identities = 22/54 (40%), Positives = 27/54 (50%) Frame = +3 Query: 111 NESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPARVLVLRFRRRKMGER 272 NE G Q SG R+ R++TGE+P S FP +LR RR GER Sbjct: 485 NECG-KSFQDSSGFRVHQRVHTGEKPFECS-ECGKSFPQSCSLLRHRRVHTGER 536
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 32.3 bits (72), Expect = 0.29 Identities = 33/111 (29%), Positives = 38/111 (34%), Gaps = 2/111 (1%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSEQP 202 GPGP P RG G P P P RG R G G GR P G Sbjct: 697 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG---GGGHR 752 Query: 203 PHRSRVSC*GFSPSFSAAQ--DGGESEGNREVVQRHQGVRLHLPGGRQRRP 349 PH G + + GG G+R H+G + GG RP Sbjct: 753 PHEGPGGGMGNNSGHRPHEGPGGGMGSGHRP----HEGPAGSMGGGGGHRP 799
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 32.3 bits (72), Expect = 0.29 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 182 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 1022 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1077 Query: 183 RPIA 194 R IA Sbjct: 1078 RGIA 1081 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 130 PKQPDSLTAPRGATGS-GPDGALTLPGA 50 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 GAPG AP P P P G +G LG + ++G Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAG 428
>CSPA_SHIBO (Q53816) Major cold shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFI+P+DGS D+F Sbjct: 2 KGFGFITPDDGSKDVF 17
>CSPA_SALVI (Q56178) Major cold shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFI+P+DGS D+F Sbjct: 2 KGFGFITPDDGSKDVF 17
>CSPA_ENTAE (Q46664) Major cold shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFI+P+DGS D+F Sbjct: 2 KGFGFITPDDGSKDVF 17
>CSPA_CITFR (Q46051) Major cold shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFI+P+DGS D+F Sbjct: 2 KGFGFITPDDGSKDVF 17
>CSPA_AERSA (Q44317) Major cold-shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFISP DGS D+F Sbjct: 2 KGFGFISPADGSKDVF 17
>CSPA_AERHY (Q44078) Major cold-shock protein (Fragment)| Length = 46 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFISP DGS D+F Sbjct: 2 KGFGFISPTDGSKDVF 17
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 131 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632 Score = 28.1 bits (61), Expect = 5.6 Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 2/76 (2%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 182 G S R + G PG V P P P +GA G G G P+ G+ Sbjct: 464 GKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPG----PQGIAGQ 519 Query: 183 RPIAN--SHHTDLGFP 224 R + + GFP Sbjct: 520 RGVVGLPGQRGERGFP 535 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 170 KGAPG P P+G + G +G+ + G R P L Sbjct: 496 KGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 537
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 31.6 bits (70), Expect = 0.50 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +3 Query: 45 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 KG PG VR P G P P+ PRG + G G+ P + G + P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 31.6 bits (70), Expect = 0.50 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 185 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE--RPIANSHHTDLGF 221 GAPG A P P PRG E+G G G R P N G P A H +G Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGFPG-NPGPPGSPGAAGHQGAVGS 1131 Query: 222 P 224 P Sbjct: 1132 P 1132 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSG 1073 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRLRPRLNT 176 G A D Q KG PG P P P+ G G G P G P+ Sbjct: 917 GVAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIK 976 Query: 177 GE--RPIANSHHTDLGFP 224 GE +P A+ H+ + G P Sbjct: 977 GESGKPGASGHNGERGPP 994 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANS 200 GAPG + A P P GA + G G K+G + P GER A S Sbjct: 404 GAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGAR-GERGEAGS 453
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 31.6 bits (70), Expect = 0.50 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Frame = -2 Query: 283 VPFTLSPIXXXXXXXXXXLAGNPRSVWWLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTA 104 VP LSP G +V IG P F LG P +G P + A Sbjct: 389 VPGALSPAATAKAAAKAAKFGARGAV----GIGGIPTFGLGPGGFPGIGDAAAAPAAAAA 444 Query: 103 PRGATGSGPDGAL--TLPGAP 47 G+G GAL +PGAP Sbjct: 445 KAAKIGAGGVGALGGVVPGAP 465
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 31.2 bits (69), Expect = 0.66 Identities = 16/71 (22%), Positives = 32/71 (45%) Frame = +3 Query: 6 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 D+ +T++ + +P + +PS +NE C+ P S L+P + ++ Sbjct: 805 DSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQSDQ 863 Query: 186 PIANSHHTDLG 218 P+A + D G Sbjct: 864 PVAAYEYYDAG 874
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 31.2 bits (69), Expect = 0.66 Identities = 34/122 (27%), Positives = 38/122 (31%), Gaps = 13/122 (10%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKY--------- 175 GPGP P RG G P P P RG R G G GR P Sbjct: 700 GPGPGPYHRGR-GGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHE 758 Query: 176 ----GRETDSEQPPHRSRVSC*GFSPSFSAAQDGGESEGNREVVQRHQGVRLHLPGGRQR 343 G + S PH G GG G+R H+G + GG Sbjct: 759 GPGGGMSSGSGHRPHEGPGGGMGGGHRPHEGPGGGMGGGHRP----HEGPGGGMGGGSGH 814 Query: 344 RP 349 RP Sbjct: 815 RP 816
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.2 bits (69), Expect = 0.66 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G A DR + GAPG P P P P G + G G Q G Sbjct: 981 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 130 PKQPDSLTAPRGATGS-GPDGALTLPGA 50 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 0.86 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 185 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE--RPIANSHHTDLGF 221 GAPG A P P PRG E+G G G R P N G P A H +G Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHRGFPG-NPGPPGSPGAAGHQGAIGS 1131 Query: 222 P 224 P Sbjct: 1132 P 1132 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPSG 1073 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 4/78 (5%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGM--QPKSGGRLRPRLNT 176 G A D Q KG PG P P P+ G G G P G P+ Sbjct: 917 GIAGPKGDAGQPGEKGPPGAQGPPGSPGPLGIAGLTGARGLAGPPGMPGPRGSPGPQGIK 976 Query: 177 GE--RPIANSHHTDLGFP 224 GE +P A+ H+ + G P Sbjct: 977 GESGKPGASGHNGERGPP 994
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 0.86 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076
>CSPA_YEREN (Q56922) Major cold shock protein (Fragment)| Length = 46 Score = 30.8 bits (68), Expect = 0.86 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +3 Query: 306 KGFGFISPEDGSDDLF 353 KGFGFI+P DGS D+F Sbjct: 2 KGFGFITPADGSKDVF 17
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.8 bits (68), Expect = 0.86 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -2 Query: 187 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 47 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 0.86 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 27.3 bits (59), Expect = 9.5 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Frame = +3 Query: 48 GAPGRVRAPSGPD-PVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 182 GAPG + PSG P PRG +G G +G G PR TGE Sbjct: 1113 GAPGE-QGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRGRTGE 1162
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 131 G A A DR + G+PG P GP P G E G G Sbjct: 620 GPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPKG 662
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 107 RASWGDRVRAGRGSHPPRRPFPGDL 33 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +3 Query: 6 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 ++ SA+ ++PW P R PSG + + + + +G L P SGG + +G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLP-SGGEITETSASGTE 922 Query: 186 PIA 194 I+ Sbjct: 923 EIS 925
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGRLRPRLN 173 G+ SA G+PG P P P P GA ++E+G G+ +GG L Sbjct: 494 GEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGLHLPNGGVEGAVLG 553 Query: 174 TGERP 188 G +P Sbjct: 554 KGGKP 558
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 24.6 bits (52), Expect(2) = 1.2 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Frame = +2 Query: 149 R*TPSKAKYGRETDSEQPPHRSRVSC*GFSPSFSAAQDGGESEG-NREVVQRHQGVRLHL 325 R +PS R + S P RS SPS S+ G S G + + Q + H Sbjct: 643 RASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHS 702 Query: 326 PGGRQRRP 349 P R R P Sbjct: 703 PSPRPRAP 710 Score = 24.3 bits (51), Expect(2) = 1.2 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +1 Query: 16 QRRTGPKSPGKGRLGG*EPRPARTLSP 96 QRR P P K R P P R SP Sbjct: 620 QRRYSPSPPPKRRTASPPPPPKRRASP 646
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -2 Query: 145 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 2 D G +P+ P+GA SG G ++ + G W AED +P Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAP 54
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 163 GRSLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 38 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +3 Query: 45 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 191 K A G RVR G G + G G + +SGG+LRP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>SYE_ENTFA (Q839V7) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 485 Score = 30.0 bits (66), Expect = 1.5 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 15/106 (14%) Frame = +2 Query: 5 RRVLSDGPGPSPLERGAWEG----ESPVRPGPCRPTRRGQRVGLF---------GNAAQI 145 +R + DG S LE AW G ESP PG P R+ +R ++ N A Sbjct: 48 KRNIEDGE-KSQLENLAWLGMEWDESPAHPGEYGPYRQSERKEIYQPLIDQLLSSNRAYK 106 Query: 146 GR*TPSKAKYGRETDSE--QPPHRSRVSC*GFSPSFSAAQDGGESE 277 TP + + RE + PH + +C +PS AA++ E Sbjct: 107 CYCTPEELEAEREAQQARGEMPHYAG-TCANLTPSEQAAKEAAGLE 151
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +3 Query: 12 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 + A R W+G + PSGP +A RG V G S G + P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1| Length = 722 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 153 RLRPRLNTGERPIANSHHTDLGFPARVLVLRFRRRK 260 RLR ++N+ + P+ N + G A V V R RRRK Sbjct: 675 RLRTQVNSVKAPVNNEEKVEAGEKAAVTVKRTRRRK 710
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 G PG + P P PRGA G G P + GR+ P Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGF-PGAAGRVGP 874 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +3 Query: 42 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 ++G PG P G P+ PRG G G ++G RP GER Sbjct: 190 FQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRP----GER 233
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>TAPA_PSEFR (P72191) Temperature acclimation protein A (E7.0) (Fragment)| Length = 59 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +3 Query: 294 FNVTKGFGFISPEDGSD 344 FN KGFGFI+PE G D Sbjct: 1 FNDEKGFGFITPESGPD 17
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 9/56 (16%) Frame = +3 Query: 72 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNT---------GERPIANSHHTD 212 PS PDPV G V ES C+ QP + R R ++ P+AN+ +D Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHSFADHSGTIDDREPLANAIKSD 1239
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGER 185 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 29.6 bits (65), Expect = 1.9 Identities = 27/80 (33%), Positives = 34/80 (42%) Frame = -3 Query: 279 PSLSPPSCAAENEGLKP*QETLDRCGGCSLSVSRPYLALDGVYRPIWAAFPNNPTR*PRL 100 P PPS + +E + Q L SLS S P L G P+ P P+ P Sbjct: 318 PPPLPPSSSGNDETPRLPQRNL------SLSSSTPPLPSPGRSGPL----PPPPSERPPP 367 Query: 99 VGRQGPGRTGLSPSQAPLSR 40 R PGR+G P P+SR Sbjct: 368 PVRDPPGRSGPLPPPPPVSR 387
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 158 GAPG P P PV G + CLG + RL Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARL 679
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGERPIANSHHT 209 KG G AP P PV P+G+ G G++ + G G+ PR GE + + Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGR 1245 Query: 210 DLGFP 224 D G P Sbjct: 1246 D-GLP 1249
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore domain| potassium channel Ork1) Length = 1001 Score = 29.3 bits (64), Expect = 2.5 Identities = 22/63 (34%), Positives = 31/63 (49%) Frame = +3 Query: 72 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPARVLVLRFR 251 P G P GA++ESG Q RL P L G RP +S H+ L +R++ + Sbjct: 930 PGGSGSALPAGAIDESGGTSAQ-----RLLP-LPAGTRPSTSSTHSPL---SRIVQISQA 980 Query: 252 RRK 260 +RK Sbjct: 981 QRK 983
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 6 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQP-KSGGRLRPRLNTG 179 ++ SA+ +VPW P R PSG + +P G+ + SG + SGG + +G Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASGTGDLSGLPSGGEITETSTSG 924
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLN 173 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -1 Query: 155 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 45 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 42 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 152 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = -3 Query: 108 PRLVGRQGPGRTGLSPSQAPLSRGLG 31 P V R+ GRT SP APLSRG G Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPG 205
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +3 Query: 45 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 173 +G PG AP P P PRG V SG G SG G PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 174 TGER 185 GER Sbjct: 1013 RGER 1016 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G + DR + GAPG P P PV P G + G G SG Sbjct: 870 GAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSG 918 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANS 200 GAPG + A P P G + G G K+G + P GER A S Sbjct: 249 GAPGLIGARGPPGPPGTNGVPGQRGAAGEPGKNGAKGDPG-PRGERGEAGS 298 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 G PG AP P+ PRGA E G G+ +G R Sbjct: 132 GVPGEDGAPG---PMGPRGAPGERGRPGLPGAAGAR 164 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 GAPG P P P G G +G K G RP Sbjct: 42 GAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRP 80
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 170 KG PG V P P P G E G G+ G + P L Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGL 660 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRLRP 164 G PG P P P P RG V E G G + +SG + P Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEP 361
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/74 (28%), Positives = 27/74 (36%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 182 G + D + G PG AP P P P G E+G G + G P ++ Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG---TPAISEPL 210 Query: 183 RPIANSHHTDLGFP 224 P A D G P Sbjct: 211 TPGAPGEPGDSGPP 224
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 170 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTD 212 G PG P GP V P G E G G + + G P GE+ +A H D Sbjct: 687 GKPGDQGVPGGPGAVGPLGPRGERGNPGERGEPGITGLP----GEKGMAGGHGPD 737
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +3 Query: 45 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 173 +G PG AP P P PRG V SG G SG G PR N Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN 1168 Query: 174 TGER 185 GER Sbjct: 1169 RGER 1172 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G DR + GAPG P P PV P G + G G +G Sbjct: 1026 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAG 1074 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 KG G P P+ PRGA E G G+ +G R Sbjct: 284 KGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGAR 320 Score = 27.3 bits (59), Expect = 9.5 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 G PG+ PSGP P GA+ SG G +SG RP GER Sbjct: 204 GEPGQA-GPSGPP--GPPGAIGPSGPAGKDGESGRPGRP----GER 242
>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22| Length = 831 Score = 28.9 bits (63), Expect = 3.3 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = +2 Query: 5 RRVLSDGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYGRE 184 RR SD PSP R + P P P P RR + + + P + +Y + Sbjct: 721 RRYSSDSRSPSPPPRRRQYSDEPRSPSP--PPRRRRYSDDSRSPS-----PPPRRRYSGD 773 Query: 185 TDSEQPPHRSRVSC*GFSPS 244 + S PP R R + SPS Sbjct: 774 SRSPSPPPRRRYADDSRSPS 793
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGERPIANSHHTD 212 G PGR P P P G + G G+ G GR P+ GER + Sbjct: 788 GLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGER-------GE 840 Query: 213 LGFPAR 230 GFP R Sbjct: 841 RGFPGR 846
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -1 Query: 161 TESTARFGLHSQ-TTRLVDR---ASWGDRVRAGRGSHPPRRPFPGDLGPV 24 TESTAR LHS T VDR + G + R GR S R P G P+ Sbjct: 726 TESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/51 (33%), Positives = 20/51 (39%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 GD+ A+ G PG P P P PRG G G Q +G R Sbjct: 287 GDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 337
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +3 Query: 45 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 191 K A G RVR G G + G G + +SGG++RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 155 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 158 GAPG P P PV G + CLG + RL Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARL 680
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 28.5 bits (62), Expect = 4.3 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPVRPGPCRPTRRGQ------RVGLFGNAAQIGR*TPSKAKYGRE 184 G GP P RG G P G P RG+ + G+ A+ P + YG+ Sbjct: 352 GYGPGPNGRG---GYGPPPRGGYGPPMRGRAPPPGYQYDRRGSPAEAYGPPPGQGPYGQR 408 Query: 185 TDSEQPPHRSRVSC*GFSPSFSAAQDG 265 S PP G +P+ S+A G Sbjct: 409 QQSPGPPSAPGYGMNGSTPTVSSAAYG 435 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLG--MQPKSGGRLRPRLN 173 GAP R R + VAPR A + G + ++GGR+ P +N Sbjct: 591 GAPARSRTSEYYEDVAPRFATPDPSLRGTPVPGQAGGRIPPPIN 634
>CSPH_SALTY (P0A1D9) Cold shock-like protein cspH| Length = 70 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G G I+P DG D+ Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDV 30
>CSPH_SALTI (P0A1E0) Cold shock-like protein cspH| Length = 70 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G G I+P DG D+ Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDV 30
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 148 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 KG PG V AP PV P G + G G++ G Sbjct: 1338 KGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPG 1372 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G G+ P P V P+G ESG +G + SG Sbjct: 913 GFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSG 946
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +2 Query: 23 GPGPSPLERGAWEGESPV----RPGPCRPTRRGQRVGLFGNAAQIG 148 GP SP ERGA P+ RPGP P G+ G IG Sbjct: 1012 GPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 KG PG + AP PV P G + G G++ G Sbjct: 1338 KGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPG 1372
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGRLRPRLNTGERP 188 G+PG P P P P GA +E+G G+ +GG L G +P Sbjct: 513 GSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP 562 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -2 Query: 130 PKQPDSLTAPRGATGSGPDGALTLPGAP-FQG 38 P P L P G T G GA +PG P FQG Sbjct: 157 PPGPPGLPGPSGITIPGKPGAQGVPGPPGFQG 188
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 GAPG AP P P P G +G LG + ++G Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 271
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 +GAPG AP P P P+G + G G + G Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPG 82
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -2 Query: 187 GLSPVFSLGRSLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVA 17 G+ + +G+S P G +P++P S + RGA S G T+PG P +R Sbjct: 160 GMKVLLRVGQS--PRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAE 217 Query: 16 EDASP 2 P Sbjct: 218 GPLPP 222
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 81 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 1 G +GL PS A + PGP+L T Q Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQ 1022
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -2 Query: 148 PDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 2 PDL + PDS A T SGP A PGAP G + ED P Sbjct: 19 PDLA--GRAPDSEAARAAPTPSGPPAAAAPPGAP--GDELYAALEDYHP 63
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 161 KG G P P P PRG E G G Q +G R R Sbjct: 1452 KGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAGRRRR 1490
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.1 bits (61), Expect = 5.6 Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPR 167 G+A D+ +G PG P P P+ G G G + G G + PR Sbjct: 1415 GEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPR 1474 Query: 168 LNTGERPIANSHHTDLGFPARVLVLRFRRR 257 +TG G PA + LR RRR Sbjct: 1475 GDTGPAGPPGPP----GAPAELHGLRRRRR 1500
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 28.1 bits (61), Expect = 5.6 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM--------QPKSGGRLRPRLNTGE 182 +G PG P PRGA E+G G QP GR+ PR +G+ Sbjct: 951 QGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGD 1004
>Y2127_STRCO (P40182) Hypothetical protein SCO2127| Length = 191 Score = 28.1 bits (61), Expect = 5.6 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -2 Query: 166 LGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 11 + LPP P + D++ R ATG GA PGA WA + AED Sbjct: 1 MSEELPPSEAPRPDEADAVDETR-ATGE-TRGAAQEPGASDADAWATACAED 50
>ENV_FENV1 (P31791) Env polyprotein precursor [Contains: Glycoprotein GP70;| Transmembrane protein p15E] Length = 671 Score = 28.1 bits (61), Expect = 5.6 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -3 Query: 177 PYLALDGVYRPIWAAFPNNPTR*PRLVGRQGPGRTGLSPSQAPLSRGLGPGPSLRT 10 P L L P+ A P P R P R P + LSPS + GP P T Sbjct: 248 PNLVLADQKTPVQLAIPVQPPRAPTQTPRVNPVNSTLSPSLGYPAPAPGPRPPYPT 303
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 161 GDA +R KG PGR P P +G+ G G Q G + R Sbjct: 358 GDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGR 410
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGR-----VRAPSG-PDPVAPRGAVNESGCLGMQPKSG 149 G+ A D GAPG R P G P P PRG E+G G Q + G Sbjct: 404 GEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGEAGPQGDQGREG 458
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 81 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 1 G +GL PS A + PGP+L T Q Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQ 1070
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -2 Query: 178 PVFSLGRSLPPDLGCIPKQPD------SLTAPRGATGSGPDGALTLPGAPFQ 41 P GR L P L P QP +L APR + GP TL GAP + Sbjct: 468 PPLQQGRFLQPRLA--PNQPPPPLIRPALAAPRHSARPGPQPPPTLIGAPLE 517
>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain| precursor (MHC class I antigen Cw*2) Length = 366 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 164 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 27 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYNRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -2 Query: 187 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTW 32 G++P +LG + P + P S T+ G++G G GA GA GT+ Sbjct: 343 GIAPPLALG-AYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY 393
>RNR_THIFE (P54084) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein| homolog) (Fragment) Length = 439 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +3 Query: 267 ERVKGTVKWFNVTKGFGFISPEDGSDDLF 353 E V+GTV GFGF+ PE G DLF Sbjct: 92 ELVRGTVSAH--PDGFGFLIPEAGGKDLF 118
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 9 ASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG----GRLRPRLNT 176 A + +RA+ P +G P+GP P PR + G P+SG G RP Sbjct: 269 AQAREERAERPDRGPRPAGARPAGPRPGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGF 328 Query: 177 GE 182 G+ Sbjct: 329 GQ 330
>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor| Length = 3063 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/39 (35%), Positives = 15/39 (38%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 G PGR P P P P G + G G G R P Sbjct: 2818 GLPGRTGTPGLPGPPGPMGPPGDRGFTGKDSAMGPRGPP 2856
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/69 (27%), Positives = 28/69 (40%) Frame = +3 Query: 51 APGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPAR 230 +PG P P P+A R + + +GC P + G L P P +++ PA Sbjct: 200 SPGGTVQPKSPAPLAARCSASRAGC----PTAAGSLLP---APRPPASSASSPQAAAPAA 252 Query: 231 VLVLRFRRR 257 R RR Sbjct: 253 PSATRLPRR 261
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 27.7 bits (60), Expect = 7.3 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Frame = +2 Query: 20 DGPGPSPLERGAWEGESPVRPGPCRP-TRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSE 196 D PSP + ESP P P RP RRG ++G P ++ + + E Sbjct: 1988 DQEAPSPEALPSPGQESPDGPSPRRPELRRGSSAE--SALPRVGSREPGRSLH-KAASVE 2044 Query: 197 QPPHRSRVSC*GFSPSFSAAQDGGESEGNREVVQRHQGVRLHLPGG 334 P RS SP + GG EG E QR Q +R L G Sbjct: 2045 LPQRRSP------SPGATRLTRGGLGEG--EYAQRLQALRQRLLRG 2082
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 164 G PGR P P P P G E G G +G R P Sbjct: 2822 GLPGRSGTPGLPGPPGPVGPPGERGFTGKDGPTGPRGPP 2860
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1090 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 4 ETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARS 111 ET+ + + KSPG+ + G PA SP EA+S Sbjct: 512 ETKSRVKEEAKSPGEAKSPGEAKSPAEAKSPGEAKS 547
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 27.7 bits (60), Expect = 7.3 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Frame = +2 Query: 20 DGPGPSPLERGAWEGESPVRPGPCRP-TRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSE 196 D PSP + ESP P P RP RRG ++G P ++ + + E Sbjct: 1988 DQEAPSPEALPSPGQESPDGPSPRRPELRRGSSAE--SALPRVGSREPGRSLH-KAASVE 2044 Query: 197 QPPHRSRVSC*GFSPSFSAAQDGGESEGNREVVQRHQGVRLHLPGG 334 P RS SP + GG EG E QR Q +R L G Sbjct: 2045 LPQRRSP------SPGATRLTRGGLGEG--EYAQRLQALRQRLLRG 2082
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 KG PG V AP P P G E G G+ G Sbjct: 619 KGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKG 653
>LPIN1_HUMAN (Q14693) Lipin-1| Length = 890 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +1 Query: 1 LETRPQRRTGPKSPGKGRLGG*EPRPARTLSPHEARSTS 117 L ++ RTG K+P L G P+ A++ SPH+ + +S Sbjct: 256 LVSKSTERTGQKNPEMLWLWGELPQAAKSSSPHKMKESS 294
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -2 Query: 136 CIPKQPDSLTAPRGATGS-GPDGALTLPGAPFQG 38 CI K P L P G G GP G PGAP QG Sbjct: 133 CI-KCPQGLPGPAGVPGQPGPKGPNGNPGAPAQG 165
>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein| Length = 1723 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 26 PGPSPLERGAWEGESPVRPGPCRPT 100 P P P G+W G P PG RP+ Sbjct: 830 PPPQPEASGSWGGPPPPPPGNVRPS 854
>NRX2A_RAT (Q63374) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1715 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVN 113 GAPG + APS P P P G +N Sbjct: 1548 GAPGVLLAPSAPAPNLPAGKMN 1569
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/45 (24%), Positives = 21/45 (46%) Frame = +3 Query: 66 RAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANS 200 + P+GP P++ + N+ + P G P L++ P+ S Sbjct: 1102 KPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPS 1146
>NRX2B_RAT (Q63376) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 662 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVN 113 GAPG + APS P P P G +N Sbjct: 495 GAPGVLLAPSAPAPNLPAGKMN 516
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/49 (38%), Positives = 20/49 (40%) Frame = +3 Query: 3 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G A D KG PGR P P PV PRG E G G + G Sbjct: 1601 GRAGPPGDSGPPGEKGDPGR---PGPPGPVGPRGRDGEVGEKGDEGPPG 1646
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 191 G G P P P+G + +G G GGR P +N P+ Sbjct: 241 GPLGAAGPPGFPGAPGPKGEIGGAGSNGPSGPQGGRGEPGINGAVGPV 288
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 +GAPG+ A P P +G+ + G +G + ++G Sbjct: 210 QGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETG 244
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Frame = +3 Query: 66 RAPSGPD-PVAP----RGAVNESGCLGMQPKSGGRLRPRL 170 R+P GP P AP R A+ +GC + P RPRL Sbjct: 11 RSPQGPGGPAAPAATGRAALPSAGCCPLPPGRNSSSRPRL 50
>NRX2B_HUMAN (P58401) Neurexin-2-beta precursor (Neurexin II-beta)| Length = 666 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVN 113 GAPG + APS P P P G +N Sbjct: 499 GAPGVLFAPSAPAPNLPAGKMN 520
>WBS18_HUMAN (Q96LL9) Williams-Beuren syndrome chromosome region 18 protein| Length = 226 Score = 27.3 bits (59), Expect = 9.5 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Frame = +2 Query: 5 RRVLSD----GPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAK 172 R +LSD GPG P A + SP P P T G R N +A Sbjct: 112 RGLLSDEDLRGPGVRPSRTPAPDPGSPRTPPPTSRTHDGSRASPGANRTMFNFDAFYQAH 171 Query: 173 YGRETDSEQ 199 YG + + E+ Sbjct: 172 YGEQLERER 180
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%) Frame = +2 Query: 23 GPGPSPL--ERGAWEGESPVRPGPCRP 97 GPGP PL AW P RPG RP Sbjct: 16 GPGPRPLWGPGPAWSPGFPARPGRGRP 42
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -2 Query: 130 PKQPDSLTAPRGATGSGPDGALTLPGAP 47 P QP S AP GP+GA PGAP Sbjct: 174 PGQPGSDAAPGEQGPKGPNGAPGKPGAP 201
>CONG_BOVIN (P23805) Conglutinin precursor| Length = 371 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 185 KGAPG AP G SG +G Q SG R P L G+R Sbjct: 162 KGAPGETGAP------GRAGVTGPSGAIGPQGPSGARGPPGLK-GDR 201
>RL15E_AERPE (Q9YBZ8) 50S ribosomal protein L15e| Length = 225 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +3 Query: 42 WKGAPG--RVRAPSGPDPVAPRGAVNESGCL--GMQPKSGGRLRPRLNTGERP 188 W+ P RV P+ D G + G + ++ + GGR +PR N G RP Sbjct: 32 WRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNKGRRP 84
>PCDH9_HUMAN (Q9HC56) Protocadherin-9 precursor| Length = 1203 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 209 RSRVSC*GFSPSFSAAQDGGESEGNREVVQRHQGVRLHLPGGRQ 340 RS S FS S ++Q G +++G Q + V HLP G Q Sbjct: 983 RSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQ 1026
>CSPH_SHIFL (P0A985) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G GFI P DG ++ Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEV 30
>CSPH_ECOLI (P0A982) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G GFI P DG ++ Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEV 30
>CSPH_ECOL6 (P0A983) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G GFI P DG ++ Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEV 30
>CSPH_ECO57 (P0A984) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 261 MGERVKGTVKWFNVTKGFGFISPEDGSDDL 350 M ++ G VK F+ G GFI P DG ++ Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEV 30
>UVRB_PROAC (Q6A9K7) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 701 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +3 Query: 90 VAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANSHHTDLGFPARVLVLRFRRRK 260 VAP V+E G QP++ L R+N+GE+ + T G A V L R ++ Sbjct: 11 VAPFHVVSEFQPSGDQPQAIAELEKRVNSGEQDVVLLGATGTGKTATVAWLAERLQR 67
>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)| Length = 1500 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/62 (27%), Positives = 22/62 (35%) Frame = +2 Query: 20 DGPGPSPLERGAWEGESPVRPGPCRPTRRGQRVGLFGNAAQIGR*TPSKAKYGRETDSEQ 199 D P PS E +E E P+ P P P+ + Q P + Y E E Sbjct: 798 DQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPPVKTPDQPEPSKPEEPNYETEKPLEP 857 Query: 200 PP 205 P Sbjct: 858 AP 859
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 129 PNNPTR*PR-LVGRQGPGRTGLSPSQAPLSRGLGPGPSL 16 P PT+ P GPG G P+ +P G GPGP+L Sbjct: 39 PPQPTQPPPGPAAASGPGAAG--PASSPPPAGPGPGPAL 75
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%) Frame = +3 Query: 54 PGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL-NTGERPIANSHHTDLGFP 224 PGR P P P+G G G+ G + RP T E P D+G P Sbjct: 673 PGRHGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDP 730
>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1712 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVN 113 GAPG + APS P P P G +N Sbjct: 1545 GAPGVLFAPSAPAPNLPAGKMN 1566
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 191 G PG +P P P P G + G G P + G P + GER I Sbjct: 234 GQPGADGSPGQPGPKGPNGPDGQPGADG-NPGAPGPAGPPGSPGERGI 280
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 48 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 149 G PG P P PRG GC G Q SG Sbjct: 112 GFPGADGIPGHPGQGGPRGRPGYDGCNGTQGDSG 145
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.3 bits (59), Expect = 9.5 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 4/64 (6%) Frame = +3 Query: 45 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR----LRPRLNTGERPIANSHHTD 212 KG PG V A P P G E G G+ G + LR + R A H Sbjct: 621 KGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAHGA 680 Query: 213 LGFP 224 +G P Sbjct: 681 VGAP 684 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,122,404 Number of Sequences: 219361 Number of extensions: 1367809 Number of successful extensions: 7316 Number of sequences better than 10.0: 264 Number of HSP's better than 10.0 without gapping: 5515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7197 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
