>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
           (Ca(2+)-inhibitable adenylyl cyclase)
          Length = 1265

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 207 RAADEISRARADREHGALGGGAYVEHPRGGGG 302
           R  D+  R    R  GA GGG+    P GGGG
Sbjct: 123 RGGDDCGRGSRRRRRGAAGGGSSRAPPAGGGG 154

>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1264

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 207 RAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAKSLASAVGRT 359
           R  D+  R    +  GA GGG+    P GGG        G+ + A+A G T
Sbjct: 109 RGGDDCGRGSRRQRRGAAGGGSTRAPPAGGG-----CGGGSAAAAAAAGGT 154

>IF3_MYCTU (P65135) Translation initiation factor IF-3|
          Length = 201

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/18 (77%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 275 RGAPTRRR-RHPGERAGG 325
           RGA TR R RHPGE AGG
Sbjct: 169 RGAKTRARARHPGEPAGG 186

>IF3_MYCBO (P65136) Translation initiation factor IF-3|
          Length = 201

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/18 (77%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 275 RGAPTRRR-RHPGERAGG 325
           RGA TR R RHPGE AGG
Sbjct: 169 RGAKTRARARHPGEPAGG 186

>UREE2_PSESM (Q87VM7) Urease accessory protein ureE 2|
          Length = 166

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 180 VMQAEMDARRAADEISRARADREHGALGGGAYVEHPRGG 296
           V++A +D   A  E   A    EHGA GGG +  H R G
Sbjct: 113 VLKAMLDQLGATTEAIEAPFQPEHGAYGGGHH--HSRAG 149

>VG01_EHV1V (P84394) Hypothetical gene 1 protein|
          Length = 202

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 358 VRPTALARDFAPSCTLSRMPPPPRG 284
           +RP  ++R  A S ++S  PPPP G
Sbjct: 1   MRPEGVSRGRASSVSISMCPPPPNG 25

>VG01_EHV1H (P84450) Hypothetical gene 1 protein|
          Length = 202

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 358 VRPTALARDFAPSCTLSRMPPPPRG 284
           +RP  ++R  A S ++S  PPPP G
Sbjct: 1   MRPEGVSRGRASSVSISMCPPPPNG 25

>VG01_EHV1B (P28978) Hypothetical gene 1 protein|
          Length = 202

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 358 VRPTALARDFAPSCTLSRMPPPPRG 284
           +RP  ++R  A S ++S  PPPP G
Sbjct: 1   MRPEGVSRGRASSVSISMCPPPPNG 25

>HNRPL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 558

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 207 RAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAKSLASAV 350
           RA   +    A  +HG  GGG       GGGG  E+  +  K+ AS V
Sbjct: 25  RAPKRLKTDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPV 72

>PROA_THICR (Q31IE5) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 285 PRGGGGILESVQEGAK 332
           PRGG G++E + EGAK
Sbjct: 204 PRGGKGLIERISEGAK 219

>YCLC_PSEPU (P0A177) Hypothetical UPF0065 protein in clcB-clcD intergenic|
           region precursor
          Length = 329

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 210 AADEISRARADREHGALGGGAYVEHPRGGGGILESVQ 320
           A D +SR  A R    LG    VE+  G GGI+ S +
Sbjct: 46  AIDMVSRVLAQRVSETLGQPVTVENRPGSGGIIGSAE 82

>CH38_DROME (P07183) Chorion protein S38|
          Length = 306

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 249 HGALGGGAYVEHPRGGGGILESVQEGAKSLASAVG 353
           HG  G G +   P  GG  L +   GA S A++ G
Sbjct: 223 HGGHGAGPHGPGPHDGGRALPAYASGADSAAASAG 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,420,561
Number of Sequences: 219361
Number of extensions: 396111
Number of successful extensions: 2308
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2302
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)