ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast43d01 |
|---|---|
| Clone Library Name | barley_pub |
>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)| Length = 416 Score = 37.4 bits (85), Expect = 0.009 Identities = 37/109 (33%), Positives = 47/109 (43%), Gaps = 5/109 (4%) Frame = +2 Query: 20 CSFTPSISFAPSTPATRHAQPH--PSPPQSR--LAAGS*TRIPL-PAMQKTAQSWFTGGT 184 CS P +FAPST + A+P SPP R L T +PL PA + Sbjct: 98 CSEPPKYNFAPSTALNKTARPFGASSPPNPRPGLVTKPVTYVPLAPACTPQHNGQVSVPD 157 Query: 185 ASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS 331 SP A +++P L + AAT P +S P D A R A D S Sbjct: 158 PSPGAAMKTEPGLAP--RTPAAT-PGPTSRPPWAVDPSFAERYAPDKTS 203
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 37.4 bits (85), Expect = 0.009 Identities = 40/140 (28%), Positives = 54/140 (38%), Gaps = 11/140 (7%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSP-PQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPST 199 S T S AP T +T + P P P S S +P P+ T S T S ST Sbjct: 742 SSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSST 801 Query: 200 AAES-----QPSLLADWNSYAATRPDASSSS-----PLPFDIEAAVRSANDTVSGTFNVV 349 S PS ++ S A + SSS+ P+P + S++ VS + Sbjct: 802 TESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTES 861 Query: 350 TKGVRELPGSFQGATSSFPS 409 + P S TSS PS Sbjct: 862 SVAPVPTPSSSSNITSSAPS 881 Score = 33.1 bits (74), Expect = 0.16 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 1/131 (0%) Frame = +2 Query: 17 VCSFTPSISFAP-STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASP 193 V S T S AP TP++ + +P S S +P P+ T S T S Sbjct: 473 VTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSS 532 Query: 194 STAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELP 373 ST S + + SSS+P+P + S++ V+ + + P Sbjct: 533 STTESSSAPVTSSTTE--------SSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTP 584 Query: 374 GSFQGATSSFP 406 S +SS P Sbjct: 585 SSSTTESSSAP 595 Score = 31.6 bits (70), Expect = 0.47 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 7/135 (5%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSW--FTGGTASPS 196 S T S S TP++ + +P S S +P P+ T S T T S Sbjct: 518 STTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESS 577 Query: 197 TAAESQPSLLADWNSYA-----ATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGV 361 +A PS +S A ++ SSS+P P + S++ V+ + + Sbjct: 578 SAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAP 637 Query: 362 RELPGSFQGATSSFP 406 P S +SS P Sbjct: 638 VPTPSSSTTESSSAP 652 Score = 30.8 bits (68), Expect = 0.80 Identities = 34/124 (27%), Positives = 48/124 (38%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 TPS S S+ A P P+P S + S +P P+ T S + S +T + Sbjct: 640 TPSSSTTESSSA-----PVPTPSSSTTESSS-APVPTPSSSTTESS--SAPVTSSTTESS 691 Query: 209 SQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQG 388 S P + S +A P SSS+ S++ T S + V T S Sbjct: 692 SAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAP 751 Query: 389 ATSS 400 TSS Sbjct: 752 VTSS 755 Score = 29.6 bits (65), Expect = 1.8 Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Frame = +2 Query: 17 VCSFTPSISFAP-STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSW--FTGGTA 187 V S T S AP TP++ + +P S S +P P+ T S T T Sbjct: 446 VTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTT 505 Query: 188 SPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRE 367 S+A PS + SSS+P P + S++ V+ + + Sbjct: 506 ESSSAPVPTPS----------SSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVP 555 Query: 368 LPGSFQGATSSFP 406 P S +SS P Sbjct: 556 TPSSSTTESSSTP 568 Score = 28.9 bits (63), Expect = 3.0 Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 4/132 (3%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S T S S TP++ + +P S S +P P+ T S T S ST Sbjct: 728 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTT 787 Query: 203 AESQPSL----LADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVREL 370 S + + S A P SSSS + ++ ++ T S + V T Sbjct: 788 ESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPT------ 841 Query: 371 PGSFQGATSSFP 406 P S +SS P Sbjct: 842 PSSSTTESSSAP 853 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S T S S TP++ + +P S S +P P+ T S + S +T Sbjct: 320 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESS--SAPVTSSTTE 377 Query: 203 AESQPSLLADWNSYAATRPDASSSS 277 + S P + S +A P SSS+ Sbjct: 378 SSSAPVTSSTTESSSAPVPTPSSST 402 Score = 28.1 bits (61), Expect = 5.2 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Frame = +2 Query: 17 VCSFTPSISFAP-STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASP 193 V S T S AP TP++ + +P S S +P P+ T S T S Sbjct: 542 VTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSS 601 Query: 194 STAAESQ-----PSLLADWNSYA--ATRPDASSSSPLPFDIEAAVRSANDTV 328 ST S PS +S A + SSS+P+P + S++ V Sbjct: 602 STTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPV 653
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = +2 Query: 50 PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQP 217 P P HA PHPSPP S G + Q +F G SP+ A ++ P Sbjct: 62 PHAPPQAHAHPHPSPPPSGTGCG--------GREGRGQEYFHPGGGSPAAAYQAAP 109
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 36.2 bits (82), Expect = 0.019 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 PS S +P++PA ++P P+ P + IP+P + A S + G +S ++ E+ Sbjct: 1134 PSAS-SPTSPALPRSEPPPAGPSEK------NSIPIPTIIIKAPSTSSSGRSSQGSSTEA 1186 Query: 212 QPSLLADWNSYAATRPD-ASSSSPLP 286 +P D + P A ++SP+P Sbjct: 1187 EPPTQPDGAGGGGSSPSPAPATSPVP 1212
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 34.3 bits (77), Expect = 0.072 Identities = 31/100 (31%), Positives = 40/100 (40%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 P S P P T+ + HP+PP + AAG +P++Q T G P AA + Sbjct: 838 PQASQLPCPPVTQ-SPLHPTPPPASTAAG------MPSLQHTTPP----GMTPPQPAAPT 886 Query: 212 QPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS 331 QPS SSS P +V SA T S Sbjct: 887 QPS------------TPVSSSGQTPTPTPGSVPSATQTQS 914
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 34.3 bits (77), Expect = 0.072 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 2/108 (1%) Frame = +2 Query: 17 VCSFTPSISFA--PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS 190 V +TP A PS PA P P PQS A S LP QS + Sbjct: 2528 VFKYTPGNKSAVPPSVPAPPTLPPAPPLPQSTSKAASGPPPTLPPAPPLPQSTSKAASGP 2587 Query: 191 PSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSG 334 P T + P + + + P + PLP A A + SG Sbjct: 2588 PPTLPPAPPLPQSTSKAASGPPPTLPPAPPLPQSTSKAASGATQSDSG 2635
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 33.5 bits (75), Expect = 0.12 Identities = 34/105 (32%), Positives = 48/105 (45%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLL 226 APST + + A P P QS+ A S R P P Q+ +Q F G AS + + S Sbjct: 569 APSTLSQQAAYPQPQSQQSQQTAYSQQRFPPP--QELSQDSF-GSQASSAPSMTSSKGGQ 625 Query: 227 ADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGV 361 D N +RP S LP D+ ++ +D GT ++ GV Sbjct: 626 EDMNLSLQSRP-----SSLP-DLSGSI---DDLPMGTEGALSPGV 661
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 33.1 bits (74), Expect = 0.16 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Frame = +2 Query: 26 FTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPL----PAMQKTAQSWFTGGTASP 193 +T +TP T PP + AGS + +P PA+ K+ Sbjct: 408 YTTFCPLTENTPGTDSTPEASIPPMETIPAGSESSMPAGETSPAVPKSDVPATESAPVPE 467 Query: 194 STAAESQPSLLADWNSYAATRPD--ASSSSPLP 286 T A SQPS+ A S A + D A+ S+P P Sbjct: 468 MTPAGSQPSIPAGETSPAVPKSDVPATESAPAP 500 Score = 30.4 bits (67), Expect = 1.0 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 3/110 (2%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 P ++ A S P+ + P+ P+S + A PA + T T A S+A + Sbjct: 466 PEMTPAGSQPSIPAGETSPAVPKSDVPATE----SAPAPEMTPAGTETKPAAPKSSAPAT 521 Query: 212 QPSLLADWNSYAATRPDASS---SSPLPFDIEAAVRSANDTVSGTFNVVT 352 +PS +A A P ASS SS L + A +G+ +T Sbjct: 522 EPSPVAPGTESAPAGPGASSSPKSSVLASETSPIAPGAETAPAGSSGAIT 571
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 33.1 bits (74), Expect = 0.16 Identities = 31/112 (27%), Positives = 50/112 (44%) Frame = +2 Query: 17 VCSFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPS 196 V S S A S+P++ A S P S A+ S P + ++ S ++SPS Sbjct: 446 VSSSASGSSAASSSPSSSAAS---SSPSSSAASSS----PSSSAASSSPSSSASSSSSPS 498 Query: 197 TAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 ++A S + + +S +A ASSSS +A +A T++ T T Sbjct: 499 SSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTT 550
>PST1_SCHPO (Q09750) Paired amphipathic helix protein pst1 (SIN3 homolog 1)| Length = 1522 Score = 32.7 bits (73), Expect = 0.21 Identities = 24/79 (30%), Positives = 40/79 (50%) Frame = +2 Query: 53 STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLAD 232 +T + A P+P+ + + G +++P P Q + T +ASP+ A E QP++L+ Sbjct: 85 NTQVSHTAIPNPANGYAAVYGGPPSQLP-PPPQPQSHPNVTVISASPARAIEQQPTILSS 143 Query: 233 WNSYAATRPDASSSSPLPF 289 +S RP SS PF Sbjct: 144 TDS-NIPRPGTVKSSASPF 161
>MYO5_YEAST (Q04439) Myosin-5| Length = 1219 Score = 32.7 bits (73), Expect = 0.21 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +2 Query: 50 PSTPATRHA-QPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAA 205 P+ PA+RH+ +P P PP + A + +P PA TA + SP TAA Sbjct: 1000 PTAPASRHSKKPAPPPPGMQNKAATRRSVPNPASTLTASQ--SNARPSPPTAA 1050
>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA2) (SNF2-alpha) (SWI/SNF-related matrix associated actin dependent regulator of chromatin subfamily A member 2) (hBRM) Length = 1586 Score = 32.3 bits (72), Expect = 0.28 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 8/117 (6%) Frame = +2 Query: 50 PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLA 229 P +P +H+Q + SP S L A P+ +GG +P SQP L Sbjct: 109 PQSPMDQHSQGYMSPHPSPLGAPEHVSSPM-----------SGGGPTPPQMPPSQPGALI 157 Query: 230 DWNSYAATRPDASSSSPLPFDIEA--------AVRSANDTVSGTFNVVTKGVRELPG 376 + A ++P+ S P + + + + T + +G R LPG Sbjct: 158 PGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPG 214
>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 32.3 bits (72), Expect = 0.28 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 5/120 (4%) Frame = +2 Query: 59 PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTG-GTASPSTAAES----QPSL 223 P T A + + P L A ++ P+ Q A S G A PS +A S QP+ Sbjct: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQPAA 324 Query: 224 LADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSF 403 + NSY A +S P A S+ + + T+G GS+ +S+ Sbjct: 325 ASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAANSLGSYGAQAASY 384
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 32.3 bits (72), Expect = 0.28 Identities = 23/103 (22%), Positives = 38/103 (36%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S TP+ S +TP T P+ + + T P T + T T+ ST Sbjct: 186 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTK 245 Query: 203 AESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS 331 + + + +T P S++S P + S T+S Sbjct: 246 STTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTIS 288 Score = 29.3 bits (64), Expect = 2.3 Identities = 24/129 (18%), Positives = 47/129 (36%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S TP+ S +TP T P+ + + T T+Q+ T + S+ Sbjct: 195 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSST 254 Query: 203 AESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSF 382 + + + S +T P S++S + T S TF+ + + + Sbjct: 255 STTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSVISTT 314 Query: 383 QGATSSFPS 409 +++F S Sbjct: 315 ATTSTTFAS 323 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/110 (23%), Positives = 39/110 (35%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S TP+ S +TP T P+ + + T P T+ + T T + ST Sbjct: 177 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTT 236 Query: 203 AESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 + + + S +T P SS+S P S T T T Sbjct: 237 STTSQT------STKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTST 280 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/110 (20%), Positives = 39/110 (35%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 S TP+ S +TP T P+ + + T P T+ + T T++ T Sbjct: 150 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTT 209 Query: 203 AESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 + + + S T ++S + + +S T S T T Sbjct: 210 STTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPT 259
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 32.0 bits (71), Expect = 0.36 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Frame = +2 Query: 23 SFTP-SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPST 199 S++P S S++PS+P P SP + S T P + G + S Sbjct: 1664 SYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPK 1723 Query: 200 AAESQPSLLADWNSYAATRPDASSSSP 280 + S P+ SY+ T P S +SP Sbjct: 1724 YSPSSPTYSPTSPSYSPTSPQYSPTSP 1750
>UQCR2_NEUCR (O60044) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) Length = 454 Score = 31.6 bits (70), Expect = 0.47 Identities = 24/71 (33%), Positives = 35/71 (49%) Frame = +2 Query: 98 QSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASSSS 277 +S L+ GS + PA KTAQ F ASP AA +P+ +A A+R D+ ++ Sbjct: 4 RSALSRGSQLALRRPAAAKTAQRGFAAAAASP--AASYEPTTIA--GVKVASRDDSGPTT 59 Query: 278 PLPFDIEAAVR 310 L +A R Sbjct: 60 RLAVVAKAGTR 70
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 31.2 bits (69), Expect = 0.61 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQP----HPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPS 196 TPS + PS+P T P PSPP + + S T P P T + T+SP Sbjct: 1698 TPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPP-TTTMTTLPPTTTSSPL 1756 Query: 197 TAAESQPSLLADWNSYAATRPDASSSSPL 283 T PS+ S +T + PL Sbjct: 1757 TTTPLPPSITPPTFSPFSTTTPTTPCVPL 1785 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIP-LPAMQKTAQSWFTGGTASPSTAA 205 TP + PS+P T PSPP + + S T P P T S T + P+T Sbjct: 1674 TPPPTTTPSSPITTT----PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMT 1729 Query: 206 ESQPSLL-ADWNSYAATRPDASSSSPL 283 P+ + + T P ++SSPL Sbjct: 1730 TPSPTTTPSPPTTTMTTLPPTTTSSPL 1756 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/114 (23%), Positives = 37/114 (32%), Gaps = 11/114 (9%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQP-----------HPSPPQSRLAAGS*TRIPLPAMQKTAQSWFT 175 TP + PS P T P PSPP + T P P T T Sbjct: 1611 TPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPIT 1670 Query: 176 GGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGT 337 T P T S P + + P + ++P P ++ + T S T Sbjct: 1671 TTTTPPPTTTPSSPI------TTTPSPPTTTMTTPSPTTTPSSPITTTTTPSST 1718 Score = 27.3 bits (59), Expect = 8.9 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPH--PSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 TP + PS P T + P PSPP + T P P M T + T P T Sbjct: 1463 TPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPM-TTPITPPASTTTLPPTT 1521 Query: 203 AESQPSLLADWNSYAATRPDASSSSP 280 S P+ + T P ++ SP Sbjct: 1522 TPSPPT------TTTTTPPPTTTPSP 1541
>LAP1_CAEEL (O61967) Protein lap1 (Protein lethal-413)| Length = 699 Score = 31.2 bits (69), Expect = 0.61 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 8/122 (6%) Frame = +2 Query: 68 RHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSL---LADWN 238 RH PHP P+ + + +P Q S + S S+ ES S+ LAD Sbjct: 472 RHNTPHPKTPKHKKGSIDGHMLPHEIDQPRQLSLVSNHRTSTSSFGESSNSINRDLADIR 531 Query: 239 SYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVR-----ELPGSFQGATSSF 403 + R +A+ S + ++ S ++ +GT N+ T ++ +L SF G TS+ Sbjct: 532 AQNGVR-EATLSPEREERMATSLSSLSNLAAGTQNMHTIRIQKDDTGKLGLSFAGGTSND 590 Query: 404 PS 409 P+ Sbjct: 591 PA 592
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 31.2 bits (69), Expect = 0.61 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 2/97 (2%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS--PSTAAESQPS 220 AP T A +A +PPQ+ + A P PA + T Q+ G T + P T S+ S Sbjct: 17 APDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPGHTLNLYPPTQTHSEQS 76 Query: 221 LLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS 331 AD ++ + + P D + + + +T S Sbjct: 77 --ADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTES 111
>TSH_DROME (P22265) Protein teashirt| Length = 954 Score = 31.2 bits (69), Expect = 0.61 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Frame = +2 Query: 50 PSTPATRH-----AQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 PS A H AQ + P + AAG+ R+PLP + A + ASP+ ++ + Sbjct: 94 PSMEAYLHMVAAAAQQYGFPLAAAAAAGAGPRLPLPLANEAAAPFKLPPQASPTASSNNS 153 Query: 215 PSLLADWNSYA---ATRPDASSSSPLPFD 292 +L N Y + P AS FD Sbjct: 154 EALDFRTNLYGRAESAEPPASEGEEEEFD 182
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 31.2 bits (69), Expect = 0.61 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLL 226 A + PA R A P AA R P PA+ A S GG A E+ P L Sbjct: 4 AAAAPAQRLADPTGEDQALAAAAAEGGRCPDPALSAAAPSGGNGGAAREEAPCEAPPGPL 63 Query: 227 -------ADWNSYAATRPDASSSSPLP 286 A +P A ++P+P Sbjct: 64 PGRAGGTGRRRRRGAPQPAAGGAAPVP 90
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 30.4 bits (67), Expect = 1.0 Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 8/135 (5%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHP--------SPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGT 184 TPS + S P + PHP Q L P PA + + GT Sbjct: 1134 TPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGT 1193 Query: 185 ASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVR 364 A TA S PS ++ + P S + F I S+N T + TK Sbjct: 1194 AKIETAVTSTPSASGQFSKPFSFSP---SGTGFNFGIITPTPSSNFTAAQGATPSTKESS 1250 Query: 365 ELPGSFQGATSSFPS 409 + P +F S PS Sbjct: 1251 Q-PDAFSSGGGSKPS 1264 Score = 30.0 bits (66), Expect = 1.4 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 7/130 (5%) Frame = +2 Query: 26 FTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQ--SWFTGGTASPST 199 F+ SF+PS P+P + AA T P+ ++++Q ++ +GG + PS Sbjct: 1210 FSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGAT----PSTKESSQPDAFSSGGGSKPSY 1265 Query: 200 AA---ESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVREL 370 A S PS + ++ P ASSS P+ A +A T S + EL Sbjct: 1266 EAIPESSPPSGITSASNTTPGEPAASSSRPV-----APSGTALSTTSSKLETPPSKLGEL 1320 Query: 371 --PGSFQGAT 394 P S G T Sbjct: 1321 LFPSSLAGET 1330
>GAS5_YEAST (Q08193) Glycolipid-anchored surface protein 5 precursor| Length = 484 Score = 30.4 bits (67), Expect = 1.0 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 4/95 (4%) Frame = +2 Query: 137 LPAMQKTAQSWFTGGTASP-STAAESQPSLLA---DWNSYAATRPDASSSSPLPFDIEAA 304 LPAM A ++FT G SP T +Q S A D T +SSSS ++ Sbjct: 362 LPAMPSAASAYFTSGAGSPMGTGIATQQSCDAKDDDDEEDDDTSSSSSSSSSSSSSASSS 421 Query: 305 VRSANDTVSGTFNVVTKGVRELPGSFQGATSSFPS 409 S++ T + + + L S ATSS S Sbjct: 422 SESSSSTSKASSSSPSASETSLLKSAASATSSSQS 456
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQP 217 +PS+PA+ P PP + A IP+P + A S + G +S ++ E++P Sbjct: 1131 SPSSPAS------PQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEP 1181
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 30.4 bits (67), Expect = 1.0 Identities = 30/100 (30%), Positives = 41/100 (41%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 P S P P T+ + HP+PP + AAG +P++Q G P AA + Sbjct: 840 PQASQLPCPPVTQ-SPLHPTPPPASTAAG------MPSLQHPT----APGMTPPQPAAPT 888 Query: 212 QPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS 331 QPS P +S +P P +V SA T S Sbjct: 889 QPS-----------TPVSSGQTPTP--TPGSVPSAAQTQS 915
>GSK3H_DICDI (P51136) Glycogen synthase kinase-3 homolog (EC 2.7.11.26) (GSK-3)| Length = 467 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +2 Query: 182 TASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 +++ S+++ S ++ ++ NS++A+ SSSS P I S +T S T N T Sbjct: 400 SSNQSSSSNSNANVSSNLNSHSASPSTTSSSSSTPNSIPVQSPSTTNTTSSTTNNTT 456
>CBIO_VIBPA (Q87G35) Putative cobalt import ATP-binding protein cbiO| Length = 579 Score = 30.4 bits (67), Expect = 1.0 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = +2 Query: 125 TRIPLPAMQKTAQSWFTGGTAS-PSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIE- 298 T +PL + T Q+WF G TA P T AE+ + SY + ++ + FDI+ Sbjct: 268 TTLPLEQYKPTVQAWFDGSTAQPPKTPAETLLEVRGLTYSYDG---EKNALEDVSFDIKR 324 Query: 299 ---AAVRSANDTVSGTFNVVTKGVRE 367 +V N + T + GV E Sbjct: 325 GEFVSVLGKNGSGKSTITKLIMGVIE 350
>IRS1_XENTR (Q6P4Y6) Insulin receptor substrate 1 (IRS-1)| Length = 654 Score = 30.4 bits (67), Expect = 1.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 40 LFRSLHPRDSSRTAASQPTSISPRRRQLNPHPPAR 144 L PR S++ +S P S+ RR NP PP++ Sbjct: 226 LSEEFRPRTKSQSLSSTPISVPSRRHHPNPPPPSQ 260
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 30.4 bits (67), Expect = 1.0 Identities = 33/128 (25%), Positives = 46/128 (35%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 SF PS P + A PHP PP + T +P P ASPS Sbjct: 559 SFLPSSCLQPPASPSIAAAPHPLPPAQKPPRPP-TTVPTPK-----------PLASPSQT 606 Query: 203 AESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSF 382 +QP+ + S T P +S P P + + + T F P S+ Sbjct: 607 QAAQPATQSP-PSIPQTAP-VTSLLPAPLETDDSCAGPISTFQDLF----------PASY 654 Query: 383 QGATSSFP 406 T++FP Sbjct: 655 YPHTANFP 662
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSP------PQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASP 193 PS P+ P+T A P P P PQS A P P Q A S GG+ + Sbjct: 487 PSAPIPPTLPSTTSAAPPPPPAFLTQQPQSGGAPA-----PPPPPQMPATSTSGGGSFAE 541 Query: 194 STAAESQPSLLA 229 +T + +LLA Sbjct: 542 TTGDAGRDALLA 553
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Frame = +2 Query: 20 CSFTPSISFAP-STPATRHAQPHPSPPQSRLAA----GS*TRIPLPAMQKTAQSWFTGGT 184 CS+T ++ P +P + SP S+L+ + P Q+ Q T G+ Sbjct: 633 CSYTTAVCSPPVQSPLATRTFHYASPTASQLSLMPQQQQQPQAPQTQPQQPPQQPQTPGS 692 Query: 185 ASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTV 328 A+P L + + RP ++S LP ++ + + TV Sbjct: 693 ATPKNEVHRSTQALPNTSLTREVRPLSASQPSLPHEVSTLISRPHPTV 740
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/84 (25%), Positives = 38/84 (45%) Frame = +2 Query: 35 SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 S S + S+ + + P PP + AAG+ P P + A+S ++S S++ +S Sbjct: 478 SSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAES-----SSSSSSSEDSS 532 Query: 215 PSLLADWNSYAATRPDASSSSPLP 286 S A +P A ++ +P Sbjct: 533 EEEKKKPKSKATPKPQAGKANGVP 556
>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) Length = 890 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 9/129 (6%) Frame = +2 Query: 20 CSFTPSISFAP-STPATRHAQPHPSPPQSRLAAGS*--------TRIPLPAMQKTAQSWF 172 CS+T ++ P +P + SP S+L+ ++ P Q+ + Sbjct: 697 CSYTTAVCSPPVQSPLAARTFHYASPTASQLSLMQQQPQQQVQQSQPPQTQPQQPSPQPQ 756 Query: 173 TGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 T G+++P L + N RP ++ LP ++ + + TV + + Sbjct: 757 TPGSSTPKNEVHKSTQALHNTNLTREVRPFSAWQPSLPHEVSTLISRPHPTVGESLASIP 816 Query: 353 KGVRELPGS 379 + V +PG+ Sbjct: 817 QPVTAVPGT 825
>ARHGB_HUMAN (O15085) Rho guanine nucleotide exchange factor 11 (PDZ-RhoGEF)| Length = 1522 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/66 (31%), Positives = 26/66 (39%) Frame = +2 Query: 26 FTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAA 205 F S+ P +T H++ SPPQ LPA Q Q GG P + Sbjct: 1361 FYVSMPSGPPDSSTDHSEAPMSPPQPD---------SLPAGQTEPQPQLQGGNDDPRRPS 1411 Query: 206 ESQPSL 223 S PSL Sbjct: 1412 RSPPSL 1417
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +2 Query: 23 SFTP-SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPL-PAMQKTAQSWFTGG---TA 187 ++TP S S++P++P+ P+ +P + S + P P+ T+ S+ T Sbjct: 251 NYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 310 Query: 188 SPSTAAESQPSLLADWNSYAATRPDASSSSP 280 T S PS SY+ T P + +SP Sbjct: 311 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 341
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 29.6 bits (65), Expect = 1.8 Identities = 23/76 (30%), Positives = 31/76 (40%) Frame = +2 Query: 50 PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLA 229 P T PHP PP S A G R P + ++ + +S S+AA SQ Sbjct: 347 PEKGPTLAPSPHPLPPASSSAPGPPMRYPYSSCSSSSVA-----ASSSSSAATSQYPASQ 401 Query: 230 DWNSYAATRPDASSSS 277 SY + P +S S Sbjct: 402 TLPSYPHSFPPPTSMS 417 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 55 HPRDSSRTAASQPTSISPRRRQLNPHPP 138 HP +SS + + P ++SP L P+PP Sbjct: 510 HPLESSNSHHAHPYNMSPSLGSLRPYPP 537
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +2 Query: 23 SFTP-SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPL-PAMQKTAQSWFTGG---TA 187 ++TP S S++P++P+ P+ +P + S + P P+ T+ S+ T Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813 Query: 188 SPSTAAESQPSLLADWNSYAATRPDASSSSP 280 T S PS SY+ T P + +SP Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Frame = +2 Query: 23 SFTP-SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPL-PAMQKTAQSWFTGG---TA 187 ++TP S S++P++P+ P+ +P + S + P P+ T+ S+ T Sbjct: 1754 NYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813 Query: 188 SPSTAAESQPSLLADWNSYAATRPDASSSSP 280 T S PS SY+ T P + +SP Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
>YM04_YEAST (Q04471) Hypothetical 42.9 kDa protein in ILV2-ADE17 intergenic| region Length = 368 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = +2 Query: 215 PSLLADWNSYAATRPDASSSSPLPFDIE 298 P LL DWN T DASS+S P D E Sbjct: 15 PQLLRDWNLPVNTPKDASSNSQHPHDEE 42
>TCNA_TRYCR (P23253) Sialidase (EC 3.2.1.18) (Neuraminidase) (NA) (Major| surface antigen) Length = 1162 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLL 226 APSTPA A PS P A G+ P+ + + T T + S +A S PS Sbjct: 695 APSTPADSSAHGTPSTPVDSSAHGT------PSTPADSSAHSTPSTPADS-SAHSTPSTP 747 Query: 227 ADWNSYAATRPDASSSS 277 AD ++++ SS+ Sbjct: 748 ADSSAHSTPSTPVDSSA 764
>GON2_TUPGB (Q95336) Progonadoliberin-2 precursor (Progonadoliberin II)| [Contains: Gonadoliberin-2 (Gonadoliberin II) (Luteinizing hormone-releasing hormone II) (LH-RH II) (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin II); GnRH-associated pepti Length = 114 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = +2 Query: 59 PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWN 238 P + A P PQS L R P P+ +TA S+ + ASP + + A W+ Sbjct: 34 PGGKRASNSPQDPQSAL------RPPAPSAAQTAHSFRSAALASPEDSVPWEGRTTAGWS 87
>WWP2_HUMAN (O00308) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-)| (WW domain-containing protein 2) (Atrophin-1-interacting protein 2) (AIP2) Length = 870 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/68 (26%), Positives = 28/68 (41%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 P+ + P P+ P+ P S + T +P PA + T GT AA++ Sbjct: 239 PTTATDPEEPSVVGVTSPPAAPLSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQA 298 Query: 212 QPSLLADW 235 +L A W Sbjct: 299 PDALPAGW 306
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 29.3 bits (64), Expect = 2.3 Identities = 24/91 (26%), Positives = 40/91 (43%) Frame = +2 Query: 35 SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 S+S + S TR PSP QSR + S ++ P P+ A+ T ASP+ + + Sbjct: 484 SLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPS---PAREKLTRPAASPAVGEKLK 540 Query: 215 PSLLADWNSYAATRPDASSSSPLPFDIEAAV 307 + A A +P + L ++ A+ Sbjct: 541 KTEPAAGKETGAAKPKLTPQEKLKLRMQKAL 571
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 7/72 (9%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSP---PQSRLAAGS*TR--IPLPAMQKTAQSW--FTGGTA 187 +P + AP QP P P PQ +L T+ P PA Q Q+W G Sbjct: 395 SPLFTRAPPPKLQPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPP 454 Query: 188 SPSTAAESQPSL 223 P T E +P + Sbjct: 455 KPPTELEPEPEI 466
>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)| Length = 289 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = +2 Query: 71 HAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQP 217 H PHPSPP G P P Q +F G SP+ A ++ P Sbjct: 69 HPHPHPSPPPGCGGGGG----PGP-----GQDYFHAGAGSPTAAYQAAP 108
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 29.3 bits (64), Expect = 2.3 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Frame = +2 Query: 59 PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTG-GTASPSTAAES----QPSL 223 P T A + + P L A ++ P+ Q A S G A PS +A S Q + Sbjct: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAA 324 Query: 224 LADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSF 403 + NSY A +S P A S+ + + T+G GS+ +S+ Sbjct: 325 ASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASY 384
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 29.3 bits (64), Expect = 2.3 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Frame = +2 Query: 59 PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTG-GTASPSTAAES----QPSL 223 P T A + + P L A ++ P+ Q A S G A PS +A S Q + Sbjct: 265 PMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAA 324 Query: 224 LADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSF 403 + NSY A +S P A S+ + + T+G GS+ +S+ Sbjct: 325 ASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASY 384
>YAT2_SCHPO (Q10149) Hypothetical protein C1D4.02c in chromosome I| Length = 345 Score = 29.3 bits (64), Expect = 2.3 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +2 Query: 65 TRHAQPHPSPPQSRLA-AGS*TRIPLPAMQKTAQSWFTGGTASPSTAA----ESQPSLLA 229 T + P P PP+ A AGS I +P Q+ +S G S + E + S Sbjct: 244 TENFLPTPEPPKIASANAGSSNEISIPHYQRHKKS-HKGAIQDSSIQSYLDEEEKLSREL 302 Query: 230 DWNSYAATRPDASSSSPLPFDIEAAVRSAND 322 D + A+ + S ++PLP AV S ND Sbjct: 303 DHKTKDASSTNDSQTTPLPPPPPVAVNSTND 333
>MBD5_HUMAN (Q9P267) Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding| protein MBD5) Length = 1494 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 Query: 83 HPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 HP+PPQSR++ S IP + Q+ G + PS++ Sbjct: 808 HPNPPQSRISTSSTPVIPNSIVSSYNQTSSEAGGSGPSSS 847
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 29.3 bits (64), Expect = 2.3 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 5/87 (5%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQ-KTAQSWFTGGTASPSTAAESQPSL 223 AP+ PA A+P P+ P S +A P P +Q K A + G A P AA + PS Sbjct: 85 APAKPAAPAAKPAPAAP-SAASAAKPGAAPKPGVQAKPAAAAKPGAPAKP--AAPAAPSA 141 Query: 224 LADWNSYAATRPDASS----SSPLPFD 292 S +A +P A++ S P P D Sbjct: 142 A---KSGSAPKPAAAAKPAFSGPTPGD 165
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Frame = +2 Query: 62 ATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFT-GGTASPSTAAESQPSLLADWN 238 A+ +QP PS S + S +R P P TA T TA+P+ A PS A Sbjct: 403 ASPSSQPSPSVSPSPSPSPSASRTPTPTPTPTASPTPTLTPTATPTPTASPTPSPTAASG 462 Query: 239 SYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNV 346 + +S F + AV ++ + T+ V Sbjct: 463 ARCTASYQVNSDWGNGFTVTVAVTNSGSVATKTWTV 498
>GAK_MOUSE (Q99KY4) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1305 Score = 29.3 bits (64), Expect = 2.3 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Frame = +2 Query: 26 FTPSISFAPST--PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPST 199 F S S A ST P+T H+ P PS + L G LPA S Sbjct: 983 FLNSDSVASSTAFPST-HSAPPPSCSTAFLHLGD-----LPA------------EPSKVI 1024 Query: 200 AAESQPSLLADWNSYAATRPDASSSSPLP 286 A+ S P LL W+++A T +S P+P Sbjct: 1025 ASSSHPDLLGGWDTWADTATPGPASIPVP 1053
>IRX3_HUMAN (P78415) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 501 Score = 28.9 bits (63), Expect = 3.0 Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 4/119 (3%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPH-PSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 P +S AP+ P A P PSPP S L + P A+QK + W TA+ Sbjct: 306 PVLSLAPAPPPVAVASPSLPSPPVS-LDPCAPAPAPASALQK-PKIWSLAETATSPDNPR 363 Query: 209 SQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVS---GTFNVVTKGVRELPG 376 P AA P A SP AA +A+ VS G F T R PG Sbjct: 364 RSPPGAGGSPPGAAVAPSALQLSP-----AAAAAAAHRLVSAPLGKFPAWTN--RPFPG 415
>I15RA_MOUSE (Q60819) Interleukin-15 receptor alpha chain precursor| (IL-15R-alpha) (IL-15RA) Length = 263 Score = 28.9 bits (63), Expect = 3.0 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 TP ++ P +P+ +P P+S A + T I + +Q+ G T + S + Sbjct: 113 TPKVTSQPESPSPSAKEPEAFSPKSDTAMTTETAIMPGSRLTPSQTTSAGTTGTGSHKSS 172 Query: 209 SQPSLLADWNSYAATRPDASSS 274 PSL A P AS+S Sbjct: 173 RAPSLAAT----MTLEPTASTS 190
>EDD1_HUMAN (O95071) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (hHYD) (Progestin-induced protein) Length = 2799 Score = 28.9 bits (63), Expect = 3.0 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 161 QSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTF 340 +S T TA A S P+ ++ +S + D+ SSS DIE ++ + T Sbjct: 1640 RSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDIEQETFMLDEPLERTT 1699 Query: 341 NVV-TKGVRELPGSFQGA 391 N G + P S Q A Sbjct: 1700 NSSHANGAAQAPRSMQWA 1717
>YTX1_XENLA (P14380) Transposon TX1 hypothetical 82 kDa protein (ORF 1)| Length = 775 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/69 (26%), Positives = 35/69 (50%) Frame = +2 Query: 125 TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAA 304 T P+PA + ++ + GT S ++ PSL A T+P +++S P P ++ + Sbjct: 262 TTAPVPAPSASNKTSYPAGTISAGSSKGISPSLKN--LKVAVTQPTSTTSKPPPSSLKTS 319 Query: 305 VRSANDTVS 331 +A T++ Sbjct: 320 KAAACLTIA 328
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 28.9 bits (63), Expect = 3.0 Identities = 33/129 (25%), Positives = 49/129 (37%), Gaps = 13/129 (10%) Frame = +2 Query: 62 ATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNS 241 AT + P + P S + T +P A T + TA+ +TAA + + + Sbjct: 151 ATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTTAATT 210 Query: 242 YAATRPDA------SSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPG-------SF 382 AAT A +SS+ AA +A T + T T G S Sbjct: 211 TAATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTST 270 Query: 383 QGATSSFPS 409 GA++S PS Sbjct: 271 TGASTSTPS 279
>APA_MYCTU (Q50906) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (Immunogenic protein MPT32) (Antigen MPT-32) (45-kDa glycoprotein) (FAP-B) Length = 325 Score = 28.9 bits (63), Expect = 3.0 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +2 Query: 53 STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLAD 232 + PAT +A P P+PP AA + P T A P AA + P+ A Sbjct: 32 AVPATANADPEPAPPVPTTAASPPSTAAAPPAPATP-------VAPPPPAAANTPN--AQ 82 Query: 233 WNSYAATRPDASSSSPLP 286 A P A ++P P Sbjct: 83 PGDPNAAPPPADPNAPPP 100
>APA_MYCBO (O30620) Alanine and proline-rich secreted protein apa precursor| (Fibronectin attachment protein) (45/47 kDa antigen) (FAP-B) Length = 325 Score = 28.9 bits (63), Expect = 3.0 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +2 Query: 53 STPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLAD 232 + PAT +A P P+PP AA + P T A P AA + P+ A Sbjct: 32 AVPATANADPEPAPPVPTTAASPPSTAAAPPAPATP-------VAPPPPAAANTPN--AQ 82 Query: 233 WNSYAATRPDASSSSPLP 286 A P A ++P P Sbjct: 83 PGDPNAAPPPADPNAPPP 100
>EDD1_MOUSE (Q80TP3) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) Length = 2792 Score = 28.9 bits (63), Expect = 3.0 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 161 QSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTF 340 +S T TA A S P+ ++ +S + D+ SSS DIE ++ + T Sbjct: 1634 RSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDIEQETFMLDEPLERTT 1693 Query: 341 NVV-TKGVRELPGSFQGA 391 N G + P S Q A Sbjct: 1694 NSSHANGAAQAPRSMQWA 1711
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 26 FTPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPA 145 FTP P TRH Q +P PP L S +P P+ Sbjct: 864 FTPQPGVLGQPPPTRHTQLYPGPPPDTLPPHS-GALPFPS 902
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1840 Score = 28.5 bits (62), Expect = 4.0 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +2 Query: 23 SFTP-SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTA-SPS 196 S++P S S++P++PA P SP + S P+ T+ S+ SPS Sbjct: 1684 SYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS------PSYGPTSPSYNPQSAKYSPS 1737 Query: 197 TAAESQPSLLADWNSYAATRPDASSSSP 280 A + L+ + Y+ T P+ S +SP Sbjct: 1738 IAYSPSNARLSPASPYSPTSPNYSPTSP 1765
>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 526 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +2 Query: 173 TGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVT 352 T G P+ AA + + A +A+ +SSS + A V +A +GT Sbjct: 201 TAGATQPAAAAPTAATTSAGSTLFASIAAAPASSSATGLSLPAPVTTAATPSAGTLGFSL 260 Query: 353 KGVRELPGSFQGATSS 400 K PG+ +T++ Sbjct: 261 KAPGAAPGASTTSTTT 276
>AROC_NOCFA (Q5YTK8) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 405 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = +2 Query: 179 GTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKG 358 GTA+ +T + LA + DA++ + + +IEAA + DT+ G V+ +G Sbjct: 174 GTAANTTGVVPTAADLATVDESPVRAFDAAAEAAMIAEIEAAKKDG-DTLGGVVEVIVEG 232 Query: 359 VRELPGSFQGATSSFPS 409 + GSF + S Sbjct: 233 LPVGLGSFTSGENRLDS 249
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = -2 Query: 369 SSRTPLVTTLKVPETVSLAERTAASMSNGRGEEEEASGRVAA*EFQSASREGCDSAAVLG 190 SS+ TT+K E A++ SM RGE+ + + + + + A +E D G Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNS--KKKGAKKESSDGPLATG 184 Query: 189 EAVP 178 +AVP Sbjct: 185 KAVP 188
>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) (Serine/threonine-protein kinase Unc51.1) Length = 1051 Score = 28.5 bits (62), Expect = 4.0 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Frame = +2 Query: 92 PPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASS 271 PP S L +GS ++ +A G T SPS S PS +++ R AS Sbjct: 378 PPDSLLCSGS-------SLVASAGLESHGRTPSPSPTCSSSPSPSGRPGPFSSNRYGASV 430 Query: 272 SSPLPFD------IEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSFPS 409 P+P IE ++S + + + + P F A+ S PS Sbjct: 431 PIPVPTQVHNYQRIEQNLQSPTQQQTARSSAIRRSGSTTPLGFGRASPSPPS 482
>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1273 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKT 157 PS A S PA AQP P PP ++++ S + PA Q+T Sbjct: 227 PSQPSAQSAPAP--AQPAPQPPPAKVSKPSQLQAHTPASQQT 266
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 28.5 bits (62), Expect = 4.0 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Frame = +2 Query: 50 PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPS--------TAA 205 P PA A P P PP S A + R P + + G A P+ + Sbjct: 762 PPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLS 821 Query: 206 ESQPSLLADWNSYAATRPDASSSSP 280 SQPSL AA+ ASSS+P Sbjct: 822 ASQPSLPHGAPGPAASTRPASSSTP 846
>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface| antigens) (PMMSA) (230 kDa) (PY230) Length = 1772 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/67 (26%), Positives = 27/67 (40%) Frame = -2 Query: 375 PGSSRTPLVTTLKVPETVSLAERTAASMSNGRGEEEEASGRVAA*EFQSASREGCDSAAV 196 P +S TP VTT + + E T + + G E + A SAS +A+ Sbjct: 962 PVTSTTPEVTTSTEASSSAPGEGTPSGEAGASGTEGATASNAATPAGTSASGSAASNAST 1021 Query: 195 LGEAVPP 175 + PP Sbjct: 1022 TSDVTPP 1028
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFT-GGTASPSTAA 205 TPS + +P+ T P PSP S S T P P T T T +PS Sbjct: 82 TPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPTPSPTP 141 Query: 206 ESQPS 220 PS Sbjct: 142 SPTPS 146
>GON2_SUNMU (O97686) Progonadoliberin-2 precursor (Progonadoliberin II)| [Contains: Gonadoliberin-2 (Gonadoliberin II) (Luteinizing hormone-releasing hormone II) (LH-RH II) (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin II); GnRH-associated pepti Length = 110 Score = 28.1 bits (61), Expect = 5.2 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 134 PLPAMQKTAQSWFTGGTASPSTAAESQPSLL---ADWNSYAATRPDASSSSPLPFDIEAA 304 PL A Q + W+ GG SP + + QP+ W AA P S+ S LP A Sbjct: 23 PLKA-QHWSHGWYPGGKRSPDSPQDPQPAPRFPEGYWLGLAAGNPRQSTQS-LP---SKA 77 Query: 305 VRSANDTVS 331 + DTVS Sbjct: 78 LAPPEDTVS 86
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 28.1 bits (61), Expect = 5.2 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Frame = +2 Query: 23 SFTPSISFA---PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASP 193 SF P FA P P P P PP S+ + G+ P P F+G P Sbjct: 352 SFPPHPDFAAPPPPPPPPAADYPMPPPPLSQPSGGAPPPPPPPPPPGPPPLPFSGADGQP 411 Query: 194 STAAESQPSLLADWNSYAATRPDAS--SSSPLPFDIEAAVR 310 + PS AT+P +S + S D+ +A+R Sbjct: 412 AAPPPPPPS--------EATKPKSSLPAVSDARSDLLSAIR 444
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 28.1 bits (61), Expect = 5.2 Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 2/118 (1%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 T S S + S A+ + P S A + PA TA S + +SP E Sbjct: 957 TASPSISTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPE 1016 Query: 209 SQPSLLADWNSYAATRPDASSS--SPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPG 376 S S LAD AA S + + P + + S N KG R G Sbjct: 1017 SHSSSLADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKG 1074
>TJAP1_MOUSE (Q9DCD5) Tight junction-associated protein 1 (Tight junction| protein 4) (Protein incorporated later into tight junctions) Length = 539 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Frame = +2 Query: 41 SFAPSTPATRHAQPH--PSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 S PS+PA+ PH PSP S L+A P+++A S+ Sbjct: 358 SSVPSSPASAQGSPHHQPSPAPSALSA-------------------------PASSASSE 392 Query: 215 PSLLADW 235 LLA W Sbjct: 393 EDLLASW 399
>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like| PDZ and LIM domains protein) Length = 591 Score = 28.1 bits (61), Expect = 5.2 Identities = 24/86 (27%), Positives = 35/86 (40%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 +P++S ST T A P +++ T IP P+ T T ASP A Sbjct: 111 SPAVSKVTST--TNMAYNKVPRPFGSVSSPKVTSIPSPSSAFTPAHAATSSHASPPPVAA 168 Query: 209 SQPSLLADWNSYAATRPDASSSSPLP 286 P L+ +A+ P A+ S P Sbjct: 169 VTPPPLSASGLHASANPSAAQCSSPP 194
>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)| Length = 1076 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Frame = +2 Query: 116 GS*TRIPLPAMQK--------TAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASS 271 GS + P+P + K T++S F+ GTA+ + S S +N+ A ++ Sbjct: 774 GSASSTPIPVLGKPTDATGNTTSKSAFSFGTANTNGTNASANSTSFSFNAPATGNGTTTT 833 Query: 272 SSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSF 403 S+ ++ ++GTFNV G+ GA S+F Sbjct: 834 SN-----------TSGTNIAGTFNVGKPDQSIASGNTNGAGSAF 866
>GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1305 Score = 28.1 bits (61), Expect = 5.2 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +2 Query: 26 FTPSISFAPST--PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPST 199 F S S A ST P+T H+ P PS + L G LPA Sbjct: 983 FLNSDSVASSTAFPST-HSAPPPSCSTAFLHLGD-----LPAEPNKV------------I 1024 Query: 200 AAESQPSLLADWNSYAATRPDASSSSPLP 286 A+ S P LL W+++A T +S P+P Sbjct: 1025 ASSSHPDLLGGWDTWAETALPGPASMPVP 1053
>MMPL3_MYCLE (O06081) Putative membrane protein mmpL3| Length = 955 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 62 ATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTA 202 ATRH P PSP A+G +P+PA + + + TA P+TA Sbjct: 867 ATRHPLPTPSP-----ASGQTRAMPVPANRSSDNA---SETAEPTTA 905
>HNF3A_HUMAN (P55317) Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box| protein A1) Length = 473 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 227 ADWNSYAATRPDASSSSPLPFDIEAAVRSAND-TVSGTFNVVTKGVRELPGSF 382 +DWNSY A +A SS P+ ++ + + S N T N +T P SF Sbjct: 13 SDWNSYYADTQEAYSSVPVS-NMNSGLGSMNSMNTYMTMNTMTTSGNMTPASF 64
>PO5F1_BRARE (Q90270) POU domain, class 5, transcription factor 1 (POU domain| protein 2) Length = 472 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Frame = +2 Query: 35 SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS--PSTAAE 208 +IS AP TP+ PSPP + + +F+GGTA PS A+ Sbjct: 186 NISQAPPTPSASSPSLSPSPPGNGFG---------------SPGFFSGGTAQNIPSAQAQ 230 Query: 209 SQP 217 S P Sbjct: 231 SAP 233
>CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| Length = 268 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/84 (30%), Positives = 32/84 (38%) Frame = +2 Query: 35 SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 S+ P T A P P+PPQ AG P PA P T A Sbjct: 22 SLGLGPPTYAP--PGPAPAPPQYPDFAGYTHVEPAPA--------------PPPTWAAPF 65 Query: 215 PSLLADWNSYAATRPDASSSSPLP 286 P+ DW + P AS++SP P Sbjct: 66 PAPKDDWAAAYGPGPTASAASPAP 89
>TAB3_HUMAN (Q8N5C8) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) (NF-kappa-B-activating protein 1) Length = 712 Score = 27.7 bits (60), Expect = 6.8 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 15/93 (16%) Frame = +2 Query: 44 FAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLP---------AMQK---TAQSWFTGGTA 187 F P +P+T P+ P S GS + LP +M+K T + GTA Sbjct: 320 FMPPSPSTTPPHPYQQGPPSYQKQGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379 Query: 188 ---SPSTAAESQPSLLADWNSYAATRPDASSSS 277 SPS + +QPS + Y AT P +SS S Sbjct: 380 INRSPSPIS-NQPSPRNQHSLYTATTPPSSSPS 411
>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)| (Fragment) Length = 1078 Score = 27.7 bits (60), Expect = 6.8 Identities = 29/106 (27%), Positives = 43/106 (40%) Frame = +2 Query: 89 SPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDAS 268 +P L +G R+PLPA Q A + + P A P L +N Y +T AS Sbjct: 79 NPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPE--ANLPPPLNWQYN-YPST---AS 132 Query: 269 SSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQGATSSFP 406 ++ P S N +++ V+ G L SF + S P Sbjct: 133 QTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVP 178
>LRCH4_HUMAN (O75427) Leucine-rich repeats and calponin homology| domain-containing protein 4 (Leucine-rich neuronal protein) Length = 683 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 1/79 (1%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQP-SL 223 A ST A + P S Q+ AAG P PA Q+ A P+TA +P Sbjct: 447 AVSTQAMHNGSPKSSASQAGAAAGQGAPAPAPASQEPLP------IAGPATAPAPRPLGS 500 Query: 224 LADWNSYAATRPDASSSSP 280 + NS+ S S P Sbjct: 501 IQRPNSFLFRSSSQSGSGP 519
>DESM_HUMAN (P17661) Desmin| Length = 469 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 205 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 254
>DESM_BOVIN (O62654) Desmin| Length = 469 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 205 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 254
>POLN_EEEV1 (Q306W6) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2470 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 49 SLHPRDSSRTAASQPTSISPRRRQLNPHPP 138 ++HPR S +QPT+I+ R P PP Sbjct: 1645 AIHPRKFSTVEETQPTTIAERLIPRRPAPP 1674
>DESM_RAT (P48675) Desmin| Length = 468 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 204 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 253
>DESM_MOUSE (P31001) Desmin| Length = 468 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 204 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 253
>DESM_MESAU (P02541) Desmin| Length = 468 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 204 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 253
>DESM_CANFA (Q5XFN2) Desmin| Length = 468 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 204 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 253
>YHU3_YEAST (P38844) Protein YHR143W precursor| Length = 325 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%) Frame = +2 Query: 182 TASPSTA-AESQPSLLADWNSYAATRPDASS-----------SSPLPFDIEAAVRSANDT 325 T+S ST ES S+ + S A P ASS SS PF + + S+++T Sbjct: 120 TSSSSTYDIESSQSIESSGTSSATAEPSASSGFRLTSSSAFVSSTAPFSSQLSSSSSSET 179 Query: 326 VSGTFNVVTKGVRELPGSFQGATSSF 403 S +F+ + S ++SSF Sbjct: 180 SSSSFSTSSSSAPLSLTSSSSSSSSF 205
>Y2149_BRAJA (Q45221) Hypothetical protein blr2149 (ORF7)| Length = 516 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Frame = +2 Query: 137 LPAMQKTAQSWFTGGTASPSTAAESQ-------PSLLADWNSYAATRPDASSSSPLPFDI 295 LP+ SW GT SP+TA P+ A W + A TR + Sbjct: 164 LPSGHPLLHSWEAWGT-SPTTACPDDDGSIGISPAATAAWRAQAVTRGSTPQVGRADAYL 222 Query: 296 EAAVRSANDTVSGTF 340 + A R+ + G F Sbjct: 223 QMASRATRSGIEGVF 237
>HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB| Length = 511 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/78 (29%), Positives = 31/78 (39%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLL 226 AP+ PAT A P + AA T A + TA+ A +TA + LL Sbjct: 112 APAAPATEPAAVEEEAPAKKAAAKKTTAKKATAKKTTAKK----AAAKKTTAKKEDGELL 167 Query: 227 ADWNSYAATRPDASSSSP 280 D A P A++ P Sbjct: 168 ED---EATEEPKAATEEP 182
>APA_MYCLE (P46842) Alanine and proline-rich secreted protein apa precursor| (Antigen 43L) (Fibronectin attachment protein) (FAP-L) Length = 287 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = +2 Query: 41 SFAPSTPATRHAQPHPSPPQSRLAAGS*TR---IPLPAMQKTAQSWFTGGTASPSTAAES 211 +F PA +A P P PP + AA S + PLP ++++ G +PS + Sbjct: 28 AFTMPLPAAANADPAPLPPSTATAAPSPAQEIITPLPGAPVSSEAQ-PGDPNAPSLDPNA 86 Query: 212 QPSLLADWNSYAATRPDASSSSPLP 286 L D N+ T S LP Sbjct: 87 PYPLAVDPNAGRITNAVGGFSFVLP 111
>YBGQ_ECOLI (P75750) Hypothetical outer membrane usher protein ybgQ precursor| Length = 815 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 164 SWFTGGTASPSTAAESQPSLLADWNSYAAT-RPDASSSS 277 +W + A PST E +L D+N +A++ RP SSS Sbjct: 137 AWHSENWAPPSTWKEGVAGVLMDYNLFASSYRPQDGSSS 175
>HAP1_YEAST (P12351) Heme-responsive zinc finger transcription factor HAP1| (Heme activator protein 1) (CYP1 activatory protein) Length = 1483 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/66 (24%), Positives = 24/66 (36%) Frame = +2 Query: 134 PLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRS 313 PLP + F+ G P SQ D Y+A +P PF +A + Sbjct: 319 PLPRKCPVDHTMFSSGMIPPREDTSSQKRCPVDHTMYSAGMMPPKDETPSPFSTKAMIDH 378 Query: 314 ANDTVS 331 T++ Sbjct: 379 NKHTMN 384
>DESM_PIG (P02540) Desmin| Length = 470 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 236 NSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 N+ AA R D +++ D+E + S N+ ++ V + +REL Q Sbjct: 206 NNLAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQ 255
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 27.7 bits (60), Expect = 6.8 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPPQS-RLAAGS*TRIPLPAMQKTAQSWFTGGTASPST 199 S T +S + S A+ + S QS A+GS + P QS + TAS S Sbjct: 226 SSTSDVSSSVSQSASSTSGVSSSGSQSVSSASGSSSSFP--------QSTSSASTASGSA 277 Query: 200 AAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGV 361 + S S+ + +S +AT ++ SSS + S + T++G + T+GV Sbjct: 278 TSNSLSSITSSASSASATASNSLSSSDGTIYLPTTTISGDLTLTGKV-IATEGV 330
>PP4R1_RAT (Q8VI02) Serine/threonine-protein phosphatase 4 regulatory subunit| 1 Length = 951 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 173 TGGTASPSTAA-ESQPSLLADWNSYAATRPDASSSSPLPFDIE 298 T + SP AA +++ D NS +A+RPD +SSP P ++ Sbjct: 404 TLSSESPQEAASDAESGKKHDNNSKSASRPDVGTSSPEPTPLD 446
>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2601 Score = 27.7 bits (60), Expect = 6.8 Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 2/128 (1%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAES 211 P++S A S ++ H++ S P R A+ + ++AQS TG A + A S Sbjct: 1844 PAVS-AASLASSAHSRSVRSAPAMRAASAGARSV------RSAQSGSTGHRAGAFSVAGS 1896 Query: 212 --QPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRELPGSFQ 385 QPS P +S S+P AA+R V + EL GS Sbjct: 1897 VRQPS-----------GPPSSVSTP------AAIRGLTRDQFDAVRVRARRNLELEGSEH 1939 Query: 386 GATSSFPS 409 G+ SSF S Sbjct: 1940 GSQSSFHS 1947
>PER3_MOUSE (O70361) Period circadian protein 3 (mPER3)| Length = 1113 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +2 Query: 80 PHPSPPQSRLAAGS*TRIPL-PAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATR 256 P SP S AAGS PL PAM + P+T+ SQ + +W +++ Sbjct: 852 PSFSPYPSLGAAGSSELAPLVPAMAPNPE---------PTTSGHSQRRVEENWEAHSEEL 902 Query: 257 PDASSSSPLPFDI 295 P SS S P + Sbjct: 903 PFISSRSSSPLQL 915
>GAG_SFV1 (Q00071) Gag polyprotein (Core polyprotein)| Length = 647 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLAA--------GS*TRIPLPAMQKTAQSWFTGGTA 187 PS+ P+ ++ + P PS P + AA G P + + A + F G + Sbjct: 189 PSLDLQPAAASSPYVAPAPSAPAASAAAADLGWFAGGPGPGSLDPRLARVAYNPFLPGPS 248 Query: 188 SPSTAAESQPS 220 S AA +QPS Sbjct: 249 DGSGAAPAQPS 259
>SVS1_YEAST (Q12254) Protein SVS1 precursor| Length = 260 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Frame = +2 Query: 155 TAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDA----SSSSPLPFDIEAAVRSAND 322 T+QS T + ST S PSL N Y T D +S+ + I + SAN+ Sbjct: 71 TSQSAAIISTPTASTPTASTPSLTTSTNEYTTTYSDTDTTYTSTLTSTYIITLSTESANE 130 Query: 323 TVSGTFNVVTKGVRELPGSFQGATSSFPS 409 VT+ + S TS+ S Sbjct: 131 KAEQISTSVTEIASTVTESGSTYTSTLTS 159
>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)| (Oncogene GLI) Length = 1106 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 49 SLHPRDSSRTAASQPTSISPRRRQLNPHPPARDAEDGA 162 SL R SS ++ S ++S R +P PP E+GA Sbjct: 538 SLERRSSSSSSISSAYTVSRRSSLASPFPPGSPPENGA 575
>GRLF1_MOUSE (Q91YM2) Glucocorticoid receptor DNA-binding factor 1 (Fragment)| Length = 1337 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHPSPP 97 + P++ F STPAT P SPP Sbjct: 1292 AMAPTVPFLTSTPATSQPSPPQSPP 1316
>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)| Length = 2842 Score = 27.7 bits (60), Expect = 6.8 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAM-QKTAQSWFTGGTASPSTAAESQPSL 223 APS+ A R +Q HPS Q T +P++ Q+T Q++ T + S SL Sbjct: 1218 APSSNAKRQSQLHPSSAQRNGQTPKGTACKVPSINQETMQTYCVEDTPICFSRCSSLSSL 1277 Query: 224 LA--DWNSYAATRPDASSSSPLPF-DIEA--AVRSANDTVSGTFNVVTKGVRELPGSFQG 388 + D T +A S++ L +I+ RSA D S V++ R P Q Sbjct: 1278 SSAEDEIGCDQTTQEADSANTLQIAEIKENDVTRSAQDPASDV-PAVSQSTRTKPSRLQA 1336 Query: 389 A 391 + Sbjct: 1337 S 1337
>SHC3_RAT (O70143) SHC transforming protein 3 (SH2 domain protein C3) (Src| homology 2 domain-containing transforming protein C3) (Neuronal Shc) (N-Shc) Length = 594 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +2 Query: 143 AMQKTAQSWFTGGTASPSTAA----ESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVR 310 A ++ A + +G ++PS AA + P A S +ATR +S PLP A Sbjct: 84 AARERAGARLSGSCSAPSLAAPDGGSATPGSRAPAASMSATRKSRASDEPLPRPPRGAPH 143 Query: 311 SANDTVSGTFNVVTK 355 +++ + V K Sbjct: 144 ASDQVLGSGVTYVVK 158
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 49 SLHPRDSSRTAASQPTSISPRRRQLNPHPPARDAEDGA 162 SL R SS ++ S ++S R +P PP E+GA Sbjct: 540 SLDRRSSSSSSMSSAYTVSRRSSLASPFPPGTPPENGA 577
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 27.3 bits (59), Expect = 8.9 Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 8/131 (6%) Frame = +2 Query: 32 PSISFAPSTPATRHAQPHPSPPQSRLA------AGS*TRIPLPAMQKTAQSWFTGGTASP 193 PS AP+ A A P P P + LA AG T P AQ+ + G A Sbjct: 255 PSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA 314 Query: 194 STAAESQPSLLA--DWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKGVRE 367 A P+ ++ AA P + P + A A T++ + T Sbjct: 315 PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMV 374 Query: 368 LPGSFQGATSS 400 + + QGA S Sbjct: 375 IGPTMQGALPS 385
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAE 208 +P+ ++ PS PA + P P+P S A + T P P T + ++GG PS +A Sbjct: 428 SPAPAYTPS-PAPTYT-PSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGG---PSESAS 482 Query: 209 SQPSLLAD 232 P + D Sbjct: 483 RPPWVTDD 490
>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) Length = 1050 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = +2 Query: 92 PPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAATRPDASS 271 PP S + +GS ++ +A G T SPS S PS ++++R AS Sbjct: 378 PPDSLMCSGS-------SLVASAGLESHGRTPSPSPPCSSSPSPSGRAGPFSSSRCGASV 430 Query: 272 SSPLPFDIEAAVRSANDTVSGT 337 P+P ++ R + S T Sbjct: 431 PIPVPTQVQNYQRIERNLQSPT 452
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +2 Query: 77 QPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS 190 QP P PP S A S PLP Q T + + GT S Sbjct: 506 QPPPPPPPSSSMASS---TPLPWQQNTTTTTTSAGTGS 540
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/103 (22%), Positives = 41/103 (39%) Frame = +2 Query: 50 PSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLLA 229 PS T + PPQ+R + +PA+ ++ SP+ A+++ ++ Sbjct: 1983 PSATITWRKEGGSLPPQARSERTDIATLLIPAITTADAGFYLCVATSPAGTAQARIQVVV 2042 Query: 230 DWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGTFNVVTKG 358 AS +SP P IE++ S + + N V G Sbjct: 2043 ---------LSASDASPPPVKIESSSPSVTEGQTLDLNCVVAG 2076
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/84 (25%), Positives = 35/84 (41%) Frame = +2 Query: 35 SISFAPSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQ 214 ++S STP + QP SP T PL + + + T SP+T+ + Sbjct: 1390 TVSPTTSTPISSTPQPTSSPTTLP------TTSPLTSSATSPTTSHITSTVSPTTSPTTS 1443 Query: 215 PSLLADWNSYAATRPDASSSSPLP 286 + + + T P S++SP P Sbjct: 1444 TTSPTTSPTTSTTSPTTSTTSPTP 1467
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +2 Query: 77 QPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS 190 QP P PP S A S PLP Q T + + GT S Sbjct: 506 QPPPPPPPSSSMASS---TPLPWQQNTTTTTTSAGTGS 540
>NPCL1_MOUSE (Q6T3U4) Niemann-Pick C1-like protein 1 precursor| Length = 1333 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 10 IMSLLVYSLDLFRSLHPRDSSRTAASQPTSISPRRRQLNPH 132 + LL L R R+ ++TA SQ PR+R+ +PH Sbjct: 294 VFVLLSVVLVYLRVASNRNKNKTAGSQEAPNLPRKRRFSPH 334
>HNF3A_RAT (P23512) Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box| protein A1) Length = 466 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 230 DWNSYAATRPDASSSSPLPFDIEAAVRSAND-TVSGTFNVVTKGVRELPGSF 382 DWNSY A +A SS P+ ++ + + S N T N +T P SF Sbjct: 14 DWNSYYADTQEAYSSVPVS-NMNSGLGSMNSMNTYMTMNTMTTSGNMTPASF 64
>HNF3A_MOUSE (P35582) Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box| protein A1) Length = 468 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 230 DWNSYAATRPDASSSSPLPFDIEAAVRSAND-TVSGTFNVVTKGVRELPGSF 382 DWNSY A +A SS P+ ++ + + S N T N +T P SF Sbjct: 14 DWNSYYADTQEAYSSVPVS-NMNSGLGSMNSMNTYMTMNTMTTSGNMTPASF 64
>HAM_DROME (Q8I7Z8) Transcription factor hamlet| Length = 990 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +2 Query: 68 RHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQP 217 +H HP P Q LAA + + P P + + S A+ + AA S P Sbjct: 406 QHPHQHPLPHQPHLAATATSTCPAPPRESSESS---SSAAAAAVAAMSTP 452
>CCD16_BRARE (Q6P0I6) Coiled-coil domain-containing protein 16| Length = 326 Score = 27.3 bits (59), Expect = 8.9 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +2 Query: 29 TPSISFAPSTPATRHAQPHPSP-PQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAA 205 TP+ + + S+ R A+P P+P +++L G+ + L A GG TA Sbjct: 98 TPAAASSSSSTLKRAAEPPPAPGKRAKLQTGAGAGLGLLAGHYDDDDDDEGGAGERKTAP 157 Query: 206 ESQPSLLAD-WNSYAATRPDASSS 274 + +L AD ++S A P S S Sbjct: 158 PTDSALPADFFDSGPAPAPPISHS 181
>MSL5_YEAST (Q12186) Branchpoint-bridging protein MSL5 (MUD synthesis lethal 5| protein) Length = 476 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +2 Query: 59 PATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTG--GTASP 193 PA+ P PSPP S ++ + P P T+ S+ +G G A P Sbjct: 368 PASSRYAPSPSPPASHISRQAQNVTPTPPPGLTSSSFSSGVPGIAPP 414
>PP4R1_MOUSE (Q8K2V1) Serine/threonine-protein phosphatase 4 regulatory subunit| 1 Length = 951 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 173 TGGTASPSTAAESQPS-LLADWNSYAATRPDASSSSP 280 T + SP AA + + D NS +A+RPDA +SSP Sbjct: 408 TLSSESPQEAASNDENGRKPDTNSKSASRPDAGTSSP 444
>PMP21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precursor (Polymorphic| membrane protein 21) Length = 1609 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 131 IPLPAMQKTAQSWFTGGTASPSTAAESQPSLLADWNSYAAT 253 + L ++ A SW + G P A +++ S +WNSY +T Sbjct: 1544 VSLITLKDAAYSWKSYGVDIPCKAWKARLSNNTEWNSYLST 1584
>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 582 Score = 27.3 bits (59), Expect = 8.9 Identities = 23/80 (28%), Positives = 29/80 (36%) Frame = +2 Query: 47 APSTPATRHAQPHPSPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTASPSTAAESQPSLL 226 AP P + A P P+PP T IP+P + + Q P A +QP L Sbjct: 62 APPLPLSPPAPP-PAPPPPLATPAPLTVIPIPVVTNSPQPL----PPPPPLPAAAQPLPL 116 Query: 227 ADWNSYAATRPDASSSSPLP 286 A P S P P Sbjct: 117 APRQPALVGAPGLSIKEPAP 136
>STS5_SCHPO (O74454) Protein sts5| Length = 1066 Score = 27.3 bits (59), Expect = 8.9 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 23 SFTPSISFAPSTPATRHAQPHP----SPPQSRLAAGS*TRIPLPAMQKTAQSWFTGGTAS 190 S PS++ + + RHA+ H S P S A +P + AS Sbjct: 148 SLNPSVATSTNISPRRHAKSHSVASVSSPNSHNAVPFTPHAFVPPVNN----------AS 197 Query: 191 PSTAAESQPSLLADWNSYAATRPDASSSSPLPFDIEAAVRSANDTVSGT 337 P A + P LL N A RP + S + P +AN + GT Sbjct: 198 PLPALNTLPQLLRPRNLDAQWRPSSLSQTNSP------THAANPSFPGT 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,515,725 Number of Sequences: 219361 Number of extensions: 610632 Number of successful extensions: 3901 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 3438 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3829 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
