ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-56
2dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-56
3dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-56
4dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 4e-56
5gb|AY104924.1| Zea mays PCO065449 mRNA sequence 184 1e-43
6ref|XM_324277.1| Neurospora crassa OR74A predicted protein (NCU0... 46 0.084
7ref|XM_954276.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.084
8gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimy... 44 0.33
9gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 44 0.33
10gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Canc... 44 0.33
11gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.33
12gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.3
13ref|XM_853462.1| PREDICTED: Canis familiaris similar to CG18004-... 42 1.3
14ref|XM_523335.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.2
15ref|XM_865473.1| PREDICTED: Bos taurus similar to zinc finger an... 40 5.2
16ref|NM_173618.1| Homo sapiens coiled-coil domain containing 95 (... 40 5.2
17gb|AY189289.1| Homo sapiens LP9167 protein mRNA, complete cds 40 5.2
18ref|XM_853551.1| PREDICTED: Canis familiaris similar to CG18004-... 40 5.2
19ref|XM_844283.1| PREDICTED: Canis familiaris similar to CG18004-... 40 5.2
20ref|XM_547064.2| PREDICTED: Canis familiaris similar to CG18004-... 40 5.2
21gb|BC047712.2| Homo sapiens coiled-coil domain containing 95, mR... 40 5.2
22gb|BC035693.1| Homo sapiens coiled-coil domain containing 95, mR... 40 5.2
23emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on ch... 40 5.2
24ref|XM_774967.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.2
25emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 5.2
26emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 5.2
27emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 5.2
28emb|AL583925.1|MLEPRTN9 Mycobacterium leprae strain TN complete ... 40 5.2
29emb|CR626828.1| full-length cDNA clone CS0DI015YI05 of Placenta ... 40 5.2
30emb|CR620749.1| full-length cDNA clone CS0DK011YI15 of HeLa cell... 40 5.2
31emb|CR620186.1| full-length cDNA clone CS0DC005YO01 of Neuroblas... 40 5.2
32emb|CR618846.1| full-length cDNA clone CS0DI001YD02 of Placenta ... 40 5.2
33emb|CR617333.1| full-length cDNA clone CS0DA003YI09 of Neuroblas... 40 5.2
34dbj|AK075133.1| Homo sapiens cDNA FLJ90652 fis, clone PLACE10044... 40 5.2
35emb|CR597344.1| full-length cDNA clone CS0DC016YN21 of Neuroblas... 40 5.2
36emb|CR596765.1| full-length cDNA clone CS0DI018YD15 of Placenta ... 40 5.2
37emb|CR596568.1| full-length cDNA clone CS0DI014YI03 of Placenta ... 40 5.2
38emb|CR592458.1| full-length cDNA clone CS0DL004YI11 of B cells (... 40 5.2
39emb|CR592457.1| full-length cDNA clone CS0DL004YI12 of B cells (... 40 5.2
40emb|CR591225.1| full-length cDNA clone CS0DC024YE10 of Neuroblas... 40 5.2
41gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 40 5.2
42gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, c... 40 5.2
43gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, c... 40 5.2
44gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, com... 40 5.2
45gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isome... 40 5.2
46gb|U86933.1|MCU86933 Molluscum contagiosum virus subtype 1 clone... 40 5.2
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
49gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinosta... 40 5.2
50dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.2
51dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 40 5.2
52dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
53dbj|AK130409.1| Homo sapiens cDNA FLJ26899 fis, clone RCT00549 40 5.2
54ref|XM_312790.2| Anopheles gambiae str. PEST ENSANGP00000003181 ... 40 5.2
55emb|AJ325619.1|HSA325619 Homo sapiens genomic sequence surroundi... 40 5.2
56emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.2
57emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for prote... 40 5.2
58emb|AJ868102.1| Triticum aestivum subsp. aestivum PDI gene for p... 40 5.2
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
60gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
61emb|AL772424.5|CNS08CA2 Oryza sativa chromosome 12, . BAC OJ1118... 40 5.2
62gb|L33251.1|BLYPDIB Hordeum vulgare disulfide isomerase (PDI) mR... 40 5.2
63gb|L33250.1|BLYPDIA Hordeum vulgare disulfide isomerase (PDI) mR... 40 5.2
64gb|U11496.1|TAU11496 Triticum aestivum Chinese spring protein di... 40 5.2
65gb|U00018.1|U00018 Mycobacterium leprae cosmid B2168 40 5.2
66dbj|AB044351.1| Pseudomonas syringae plasmid pPaCu1 ORFE, ORFF g... 40 5.2
67dbj|AK074137.1| Homo sapiens mRNA for FLJ00210 protein 40 5.2 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  226 bits (114), Expect = 4e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                            
Query: 221      caagttcctcatctacggccgcaccggctggatcgggggtctcctcggcaagctctgcac 280
                ||||||||||||||||||||| ||||| ||||||||||| || |||||| |||||||| |
Sbjct: 27728062 caagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgc 27728121

                                                                            
Query: 281      cgcgcagggcatccccttcgcctacggcgccggccgcctcgagaaccgcgcccagctcga 340
                ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 27728122 cgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcga 27728181

                                                      
Query: 341      ggccgacatcgacgaggtcgcgcccacgcacgtcttca 378
                | ||||||||||||||||||||||||| ||||| ||||
Sbjct: 27728182 gaccgacatcgacgaggtcgcgcccacccacgtgttca 27728219



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 1        cgctgcagcgtcaccgtcggtgc 23
                |||||||||||||||||||||||
Sbjct: 27727760 cgctgcagcgtcaccgtcggtgc 27727782



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 260      tctcctcggcaagctctgca 279
                ||||||||||||||||||||
Sbjct: 11783894 tctcctcggcaagctctgca 11783913
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>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0663F07
          Length = 159046

 Score =  226 bits (114), Expect = 4e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                         
Query: 221   caagttcctcatctacggccgcaccggctggatcgggggtctcctcggcaagctctgcac 280
             ||||||||||||||||||||| ||||| ||||||||||| || |||||| |||||||| |
Sbjct: 13395 caagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgc 13454

                                                                         
Query: 281   cgcgcagggcatccccttcgcctacggcgccggccgcctcgagaaccgcgcccagctcga 340
             ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13455 cgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcga 13514

                                                   
Query: 341   ggccgacatcgacgaggtcgcgcccacgcacgtcttca 378
             | ||||||||||||||||||||||||| ||||| ||||
Sbjct: 13515 gaccgacatcgacgaggtcgcgcccacccacgtgttca 13552



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1     cgctgcagcgtcaccgtcggtgc 23
             |||||||||||||||||||||||
Sbjct: 13093 cgctgcagcgtcaccgtcggtgc 13115
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>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0005A04
          Length = 140723

 Score =  226 bits (114), Expect = 4e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                          
Query: 221    caagttcctcatctacggccgcaccggctggatcgggggtctcctcggcaagctctgcac 280
              ||||||||||||||||||||| ||||| ||||||||||| || |||||| |||||||| |
Sbjct: 113928 caagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgc 113987

                                                                          
Query: 281    cgcgcagggcatccccttcgcctacggcgccggccgcctcgagaaccgcgcccagctcga 340
              ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 113988 cgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcga 114047

                                                    
Query: 341    ggccgacatcgacgaggtcgcgcccacgcacgtcttca 378
              | ||||||||||||||||||||||||| ||||| ||||
Sbjct: 114048 gaccgacatcgacgaggtcgcgcccacccacgtgttca 114085



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1      cgctgcagcgtcaccgtcggtgc 23
              |||||||||||||||||||||||
Sbjct: 113626 cgctgcagcgtcaccgtcggtgc 113648
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>dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H09, full
           insert sequence
          Length = 1447

 Score =  226 bits (114), Expect = 4e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                       
Query: 221 caagttcctcatctacggccgcaccggctggatcgggggtctcctcggcaagctctgcac 280
           ||||||||||||||||||||| ||||| ||||||||||| || |||||| |||||||| |
Sbjct: 186 caagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgc 245

                                                                       
Query: 281 cgcgcagggcatccccttcgcctacggcgccggccgcctcgagaaccgcgcccagctcga 340
           ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 246 cgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcga 305

                                                 
Query: 341 ggccgacatcgacgaggtcgcgcccacgcacgtcttca 378
           | ||||||||||||||||||||||||| ||||| ||||
Sbjct: 306 gaccgacatcgacgaggtcgcgcccacccacgtgttca 343
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>gb|AY104924.1| Zea mays PCO065449 mRNA sequence
          Length = 1135

 Score =  184 bits (93), Expect = 1e-43
 Identities = 157/177 (88%), Gaps = 1/177 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gccggcgctcaagttcctcatctacggccgcaccggctggatcgggggtctcctcggcaa 271
           ||||||||||||||||||||||||||||||||| |||||||||||||| || || |||  
Sbjct: 213 gccggcgctcaagttcctcatctacggccgcacgggctggatcggggggctgctgggcgg 272

                                                                       
Query: 272 gctctgcaccgcgcagggcatccccttcgcctacggcgccggccgcctcgagaaccgcgc 331
            |||||| ||||||  || |||||||||| ||||||||||||| | ||||||||||||||
Sbjct: 273 cctctgcgccgcgcgcgggatccccttcgtctacggcgccggcaggctcgagaaccgcgc 332

                                                                    
Query: 332 ccagctcgaggccgacatcgacgaggtcgcgcccacgcacgtcttc-acgccgcggg 387
           |||||||||||||||||||||||  | ||||||||| ||||| ||| ||||||||||
Sbjct: 333 ccagctcgaggccgacatcgacgccgccgcgcccacccacgtgttcaacgccgcggg 389
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>ref|XM_324277.1| Neurospora crassa OR74A predicted protein (NCU04921.1) partial mRNA
          Length = 1263

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 298 tcgcctacggcgccggccgcctc 320
           |||||||||||||||||||||||
Sbjct: 233 tcgcctacggcgccggccgcctc 255
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>ref|XM_954276.1| Neurospora crassa OR74A hypothetical protein (NCU04921.1) partial
           mRNA
          Length = 1263

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 298 tcgcctacggcgccggccgcctc 320
           |||||||||||||||||||||||
Sbjct: 233 tcgcctacggcgccggccgcctc 255
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>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide
            biosynthetic gene cluster, complete sequence
          Length = 86941

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 326  ccgcgcccagctcgaggccgac 347
            ||||||||||||||||||||||
Sbjct: 6109 ccgcgcccagctcgaggccgac 6088
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 226    tcctcatctacggccgcaccggctggatcg 255
              ||||||||| ||||||||||| ||||||||
Sbjct: 122229 tcctcatcttcggccgcaccgactggatcg 122200
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>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 179931

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 143   cccccgttcccactcccctccc 164
             ||||||||||||||||||||||
Sbjct: 28234 cccccgttcccactcccctccc 28213
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 325     accgcgcccagctcgaggccga 346
               ||||||||||||||||||||||
Sbjct: 1783815 accgcgcccagctcgaggccga 1783836
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 335    gctcgaggccgacatcgacga 355
              |||||||||||||||||||||
Sbjct: 212161 gctcgaggccgacatcgacga 212181
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>ref|XM_853462.1| PREDICTED: Canis familiaris similar to CG18004-PA, isoform A,
           transcript variant 4 (LOC489944), mRNA
          Length = 1225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 218 gctcaagttcctcatctacgg 238
           |||||||||||||||||||||
Sbjct: 121 gctcaagttcctcatctacgg 141
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>ref|XM_523335.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ90652
           (LOC467942), mRNA
          Length = 810

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 63  gctcaagttcctcatctacg 82
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>ref|XM_865473.1| PREDICTED: Bos taurus similar to zinc finger and BTB domain
            containing 36 (LOC614110), mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  cgcgcccagctcgaggccga 346
            ||||||||||||||||||||
Sbjct: 1676 cgcgcccagctcgaggccga 1695
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>ref|NM_173618.1| Homo sapiens coiled-coil domain containing 95 (CCDC95), mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 164 gctcaagttcctcatctacg 183
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>gb|AY189289.1| Homo sapiens LP9167 protein mRNA, complete cds
          Length = 3226

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 100 gctcaagttcctcatctacg 119
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>ref|XM_853551.1| PREDICTED: Canis familiaris similar to CG18004-PA, isoform A,
           transcript variant 5 (LOC489944), mRNA
          Length = 1243

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 124 gctcaagttcctcatctacg 143
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>ref|XM_844283.1| PREDICTED: Canis familiaris similar to CG18004-PA, isoform A,
           transcript variant 3 (LOC489944), mRNA
          Length = 1021

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 115 gctcaagttcctcatctacg 134
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>ref|XM_547064.2| PREDICTED: Canis familiaris similar to CG18004-PA, isoform A,
           transcript variant 1 (LOC489944), mRNA
          Length = 1147

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 124 gctcaagttcctcatctacg 143
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>gb|BC047712.2| Homo sapiens coiled-coil domain containing 95, mRNA (cDNA clone
           MGC:52012 IMAGE:6155713), complete cds
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 126 gctcaagttcctcatctacg 145
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>gb|BC035693.1| Homo sapiens coiled-coil domain containing 95, mRNA (cDNA clone
           IMAGE:5759915)
          Length = 1974

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 123 gctcaagttcctcatctacg 142
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>emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on chromosome 10 Contains
             part of the CACNB2 gene for calcium channel
             voltage-dependent beta 2 subunit and a novel gene,
             complete sequence
          Length = 177656

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   ccctcccggatctccccatt 177
             ||||||||||||||||||||
Sbjct: 97402 ccctcccggatctccccatt 97421
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>ref|XM_774967.1| PREDICTED: Strongylocentrotus purpuratus similar to Aminopeptidase N
            (hAPN) (Alanyl aminopeptidase) (Microsomal
            aminopeptidase) (Aminopeptidase M) (gp150) (Myeloid
            plasma membrane glycoprotein CD13) (LOC574617), mRNA
          Length = 2916

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  tcgagaaccgcgcccagctc 338
            ||||||||||||||||||||
Sbjct: 1952 tcgagaaccgcgcccagctc 1971
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cggccgcaccggctggatcg 255
             ||||||||||||||||||||
Sbjct: 94270 cggccgcaccggctggatcg 94251
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     ggatcacccggccgcggggg 66
              ||||||||||||||||||||
Sbjct: 296754 ggatcacccggccgcggggg 296773
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 299     cgcctacggcgccggccgcctcga 322
               ||||||||||| ||||||||||||
Sbjct: 1560965 cgcctacggcggcggccgcctcga 1560988
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>emb|AL583925.1|MLEPRTN9 Mycobacterium leprae strain TN complete genome; segment 9/10
          Length = 308950

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    gcgcccagctcgaggccgac 347
              ||||||||||||||||||||
Sbjct: 224789 gcgcccagctcgaggccgac 224808
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>emb|CR626828.1| full-length cDNA clone CS0DI015YI05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1412

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 128 gctcaagttcctcatctacg 147
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>emb|CR620749.1| full-length cDNA clone CS0DK011YI15 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 664 gctcaagttcctcatctacg 683
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>emb|CR620186.1| full-length cDNA clone CS0DC005YO01 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1170

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 165 gctcaagttcctcatctacg 184
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>emb|CR618846.1| full-length cDNA clone CS0DI001YD02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1489

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 659 gctcaagttcctcatctacg 678
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>emb|CR617333.1| full-length cDNA clone CS0DA003YI09 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1384

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 106 gctcaagttcctcatctacg 125
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>dbj|AK075133.1| Homo sapiens cDNA FLJ90652 fis, clone PLACE1004492, weakly similar
           to VERPROLIN
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 164 gctcaagttcctcatctacg 183
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>emb|CR597344.1| full-length cDNA clone CS0DC016YN21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1171

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 163 gctcaagttcctcatctacg 182
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>emb|CR596765.1| full-length cDNA clone CS0DI018YD15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1113

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 128 gctcaagttcctcatctacg 147
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>emb|CR596568.1| full-length cDNA clone CS0DI014YI03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1169

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 163 gctcaagttcctcatctacg 182
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>emb|CR592458.1| full-length cDNA clone CS0DL004YI11 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 106 gctcaagttcctcatctacg 125
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>emb|CR592457.1| full-length cDNA clone CS0DL004YI12 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1180

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 106 gctcaagttcctcatctacg 125
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>emb|CR591225.1| full-length cDNA clone CS0DC024YE10 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1144

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 146 gctcaagttcctcatctacg 165
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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 347    catcgacgaggtcgcgcccacgca 370
              |||||||||||||||| |||||||
Sbjct: 127014 catcgacgaggtcgcgtccacgca 126991
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>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence
          Length = 151533

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   aatcccggccccttcccgtctcca 123
             ||||||||||||||||| ||||||
Sbjct: 26595 aatcccggccccttcccttctcca 26572
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>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence
          Length = 132268

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   aatcccggccccttcccgtctcca 123
             ||||||||||||||||| ||||||
Sbjct: 98863 aatcccggccccttcccttctcca 98840
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>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence
          Length = 157481

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gctcaagttcctcatctacg 237
             ||||||||||||||||||||
Sbjct: 64423 gctcaagttcctcatctacg 64442
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>gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isomerase 1 precursor (PDI1)
           mRNA, complete cds
          Length = 1784

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 19  ttccgccatggcgatctcca 38
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>gb|U86933.1|MCU86933 Molluscum contagiosum virus subtype 1 clone H1-36 genomic sequence
          Length = 531

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 347 catcgacgaggtcgcgcccacgca 370
           |||||||||||||||| |||||||
Sbjct: 148 catcgacgaggtcgcgtccacgca 125
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 260      tctcctcggcaagctctgca 279
                ||||||||||||||||||||
Sbjct: 11584234 tctcctcggcaagctctgca 11584215
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 100     aatcccggccccttcccgtctcca 123
               ||||||||||||||||| ||||||
Sbjct: 2369863 aatcccggccccttcccttctcca 2369840
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>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus neocarzinostatin
             biosynthetic locus, complete sequence
          Length = 92294

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   gccgacatcgacgaggtcgc 361
             ||||||||||||||||||||
Sbjct: 45542 gccgacatcgacgaggtcgc 45523
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     cgaggccgacatcgacgagg 357
               ||||||||||||||||||||
Sbjct: 3167142 cgaggccgacatcgacgagg 3167161
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     cccgtctccatctcgatctc 133
               ||||||||||||||||||||
Sbjct: 3807477 cccgtctccatctcgatctc 3807496
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>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0477B05
          Length = 142166

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tctcctcggcaagctctgca 279
             ||||||||||||||||||||
Sbjct: 91784 tctcctcggcaagctctgca 91803
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>dbj|AK130409.1| Homo sapiens cDNA FLJ26899 fis, clone RCT00549
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 156 gctcaagttcctcatctacg 175
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>ref|XM_312790.2| Anopheles gambiae str. PEST ENSANGP00000003181 (ENSANGG00000002575),
            partial mRNA
          Length = 2799

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cggccgcaccggctggatcg 255
            ||||||||||||||||||||
Sbjct: 1902 cggccgcaccggctggatcg 1921
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>emb|AJ325619.1|HSA325619 Homo sapiens genomic sequence surrounding NotI site, clone NB6-204C
          Length = 917

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 114 gctcaagttcctcatctacg 95
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 307    gcgccggccgcctcgagaaccgcg 330
              |||||||||||||| |||||||||
Sbjct: 241047 gcgccggccgcctctagaaccgcg 241070
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>emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide
           isomerase (PDI gene), clone CPDI-4A
          Length = 1745

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 26  ttccgccatggcgatctcca 45
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>emb|AJ868102.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide
           isomerase, exons 1-10, clone GPDI-4A
          Length = 3561

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 26  ttccgccatggcgatctcca 45
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 100     aatcccggccccttcccgtctcca 123
               ||||||||||||||||| ||||||
Sbjct: 2369814 aatcccggccccttcccttctcca 2369791
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 260      tctcctcggcaagctctgca 279
                ||||||||||||||||||||
Sbjct: 11583905 tctcctcggcaagctctgca 11583886
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>emb|AL772424.5|CNS08CA2 Oryza sativa chromosome 12, . BAC OJ1118_B01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 108927

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tctcctcggcaagctctgca 279
             ||||||||||||||||||||
Sbjct: 76594 tctcctcggcaagctctgca 76613
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>gb|L33251.1|BLYPDIB Hordeum vulgare disulfide isomerase (PDI) mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 15  ttccgccatggcgatctcca 34
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>gb|L33250.1|BLYPDIA Hordeum vulgare disulfide isomerase (PDI) mRNA, complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 4   ttccgccatggcgatctcca 23
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>gb|U11496.1|TAU11496 Triticum aestivum Chinese spring protein disulfide isomerase (PDI)
           mRNA, complete cds
          Length = 1796

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ttccgccatggcgatctcca 195
           ||||||||||||||||||||
Sbjct: 30  ttccgccatggcgatctcca 49
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>gb|U00018.1|U00018 Mycobacterium leprae cosmid B2168
          Length = 42991

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   gcgcccagctcgaggccgac 347
             ||||||||||||||||||||
Sbjct: 36375 gcgcccagctcgaggccgac 36394
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>dbj|AB044351.1| Pseudomonas syringae plasmid pPaCu1 ORFE, ORFF genes, complete cds
          Length = 4800

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  aggtcgcgcccacgcacgtc 374
            ||||||||||||||||||||
Sbjct: 4086 aggtcgcgcccacgcacgtc 4067
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>dbj|AK074137.1| Homo sapiens mRNA for FLJ00210 protein
          Length = 4469

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 gctcaagttcctcatctacg 237
           ||||||||||||||||||||
Sbjct: 136 gctcaagttcctcatctacg 155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,806,664
Number of Sequences: 3902068
Number of extensions: 2806664
Number of successful extensions: 65942
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65093
Number of HSP's gapped (non-prelim): 849
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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