ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast43b11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1345 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 199 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 258 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtcaatggctgtg 371 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| || |||| Sbjct: 259 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtcacggggtgtg 318 Query: 372 acgcttc 378 ||||||| Sbjct: 319 acgcttc 325
>dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N21, full insert sequence Length = 1345 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 199 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 258 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtcaatggctgtg 371 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| || |||| Sbjct: 259 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtcacggggtgtg 318 Query: 372 acgcttc 378 ||||||| Sbjct: 319 acgcttc 325
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 26542367 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 26542308 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtca 362 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| Sbjct: 26542307 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtca 26542257 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct: 691086 cttccatgactgcttcgtccagggctgcgacgcctccgtcct 691127
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 91234 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 91175 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtca 362 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| Sbjct: 91174 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtca 91124
>dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H09, full insert sequence Length = 2945 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 2598 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 2539 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtca 362 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| Sbjct: 2538 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtca 2488
>tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx119 gene for class III peroxidase 119 precursor, exons 1-3 Length = 2477 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 252 cgtgcccgcagctggaggacatcgtgctgaaggaggtgaccaggaagaagaacgagacga 311 ||||||| |||||||| |||||||| | | |||||| | ||||||| ||||||||| Sbjct: 122 cgtgccccaagctggagtccatcgtgcggtatgaggtgtcgaggaagatcaacgagacgg 181 Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtca 362 |||||||||||||||| || ||| ||||||||||||| ||||||||||||| Sbjct: 182 tcgtcaccatcccggccgtcctcaggctcttcttccacgactgcctcgtca 232
>dbj|D14482.1|RICPRXRPNB Oryza sativa (japonica cultivar-group) prxRPN mRNA for putative peroxidase, complete cds Length = 1348 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||||| |||||| ||||||||||||||||||| ||| |||| Sbjct: 222 cttccacgactgcttcgtcaatggctgtgacgcgtccatcct 263
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 329 gtgctccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcctg 385 |||||| ||||||||||||| |||||| |||| || ||||| |||| ||||||||| Sbjct: 7769347 gtgctcaggctcttcttccacgactgcttcgtgaacggctgcgacgggtccgtcctg 7769403 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 31019004 ggtgctccgcctcttcttccacgactgcttcgtca 31019038 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 7750668 ctccgcctcttcttccacgactgcttcgtcaatg 7750701 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 ggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 7937838 ggctcttcttccacgactgcttcgtccagggctgcgacgcctccatcct 7937886
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 329 gtgctccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcctg 385 |||||| ||||||||||||| |||||| |||| || ||||| |||| ||||||||| Sbjct: 105612 gtgctcaggctcttcttccacgactgcttcgtgaacggctgcgacgggtccgtcctg 105668 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 86933 ctccgcctcttcttccacgactgcttcgtcaatg 86966
>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0006L10 Length = 171115 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 329 gtgctccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcctg 385 |||||| ||||||||||||| |||||| |||| || ||||| |||| ||||||||| Sbjct: 9710 gtgctcaggctcttcttccacgactgcttcgtgaacggctgcgacgggtccgtcctg 9766
>dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J23, full insert sequence Length = 1345 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 338 ctcttcttccatgactgcctcgtcaatggctgtgacg 374 |||||||||||||| ||| |||||||||| ||||||| Sbjct: 303 ctcttcttccatgattgcttcgtcaatggatgtgacg 339
>dbj|AK072761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143E11, full insert sequence Length = 1379 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| |||||| |||||||||| ||||| Sbjct: 361 ctccgcctcttcttccacgactgcttcgtcaatggttgtga 401
>dbj|AK061144.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C10, full insert sequence Length = 1319 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| |||||| |||||||||| ||||| Sbjct: 359 ctccgcctcttcttccacgactgcttcgtcaatggttgtga 399
>tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx25 gene for class III peroxidase 25 precursor, exon 1 Length = 1017 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 329 gtgctccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcctg 385 |||||| ||||||||||||| |||||| |||| || ||||| |||| ||||||||| Sbjct: 211 gtgctcaggctcttcttccacgactgcttcgtgaacggctgcgacgggtccgtcctg 267
>ref|XM_479274.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| |||||||| Sbjct: 221 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcctccgtcct 272
>emb|AJ401275.1|ZMA401275 Zea mays mRNA for peroxidase (pox2 gene) Length = 1401 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 342 tcttccatgactgcctcgtcaatggctgtgacgcttccgt 381 |||||||||||||| ||||| | ||||| ||||||||||| Sbjct: 282 tcttccatgactgcttcgtcgagggctgcgacgcttccgt 321
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| |||||||| Sbjct: 26504534 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcctccgtcct 26504483 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 cggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 |||||||||||||| |||||| ||||| | ||||| ||||| Sbjct: 837449 cggctcttcttccacgactgcttcgtcgacggctgcgacgc 837489
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| |||||||| Sbjct: 49805 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcctccgtcct 49754
>dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L24, full insert sequence Length = 1213 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Plus Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtcaatggctgtg 371 |||||||| ||||||| |||||| ||||||||||| |||||| ||||| | || |||| Sbjct: 256 tcgtcaccgtcccggccacgctccgcctcttcttccacgactgcttcgtcgaggggtgtg 315 Query: 372 acgc 375 |||| Sbjct: 316 acgc 319
>tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx105 gene for class III peroxidase 105 precursor, exon 1 Length = 1023 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| |||||||| Sbjct: 221 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcctccgtcct 272
>gb|AY206414.1| Ipomoea batatas anionic peroxidase swpb3 mRNA, complete cds Length = 1290 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 338 ctcttcttccatgactgcctcgtcaatggctgtga 372 |||||||||||||||||| | |||||||| ||||| Sbjct: 234 ctcttcttccatgactgctttgtcaatgggtgtga 268
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 603 ggtgctccgcctcttcttccacgactgcttcgtca 637
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 73960 ggtgctccgcctcttcttccacgactgcttcgtca 73994
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 8228 ggtgctccgcctcttcttccacgactgcttcgtca 8262
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 602 ggtgctccgcctcttcttccacgactgcttcgtca 636
>gb|AY109094.1| Zea mays PCO139022 mRNA sequence Length = 1504 Score = 46.1 bits (23), Expect = 0.087 Identities = 29/31 (93%) Strand = Plus / Plus Query: 344 ttccatgactgcctcgtcaatggctgtgacg 374 |||||||||||| ||||||| |||||||||| Sbjct: 415 ttccatgactgcttcgtcaacggctgtgacg 445
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 ggtgctccggctcttcttccatgactgcctcgtca 362 ||||||||| ||||||||||| |||||| |||||| Sbjct: 525 ggtgctccgcctcttcttccacgactgcttcgtca 559
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtc 361 |||||||| ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 101020 tcgtcaccgtcccggccacgctccgcctcttcttccacgactgcttcgtc 100971
>ref|XM_479755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct: 255 cttccatgactgcttcgtccagggctgcgacgcctccgtcct 296
>ref|XM_469867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacg 374 |||| ||||||||||| |||||| ||||| |||| ||||||| Sbjct: 182 tccgcctcttcttccacgactgcttcgtcgatgggtgtgacg 223
>ref|XM_479517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1229 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtga 372 ||||||||||||| |||||||||| ||||| Sbjct: 258 cttccatgactgcttcgtcaatggttgtga 287
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 331 gctccggctcttcttccatgac 352 |||||||||||||||||||||| Sbjct: 108696 gctccggctcttcttccatgac 108675
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtc 361 |||||||| ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 19381794 tcgtcaccgtcccggccacgctccgcctcttcttccacgactgcttcgtc 19381745
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 18858941 ctccgcctcttcttccacgactgcttcgtcaatg 18858908 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 323 ccggcggtgctccggctcttcttccatgactgcctcgtcaa 363 ||||| || ||||| ||||||||||| |||||| ||||||| Sbjct: 18852700 ccggccgtcctccgcctcttcttccacgactgcttcgtcaa 18852660 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 28667717 gctccgcctcttcttccacgactgcttcgtca 28667748 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 338 ctcttcttccatgactgcctcgtcaatg 365 |||||||||||||| ||| ||||||||| Sbjct: 20358813 ctcttcttccatgattgcttcgtcaatg 20358786 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 18911343 ctccgcctcttcttccacgactgcttcgtcaa 18911312 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 18846818 ctccgcctcttcttccacgactgcttcgtcaa 18846849
>dbj|D83224.1|POPP01 Populus nigra mRNA for peroxidase, complete cds Length = 1143 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtga 372 ||||||||||||||| || ||||||||||| Sbjct: 200 cttccatgactgccttgttaatggctgtga 229
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 24506 ctccgcctcttcttccacgactgcttcgtcaatg 24473 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 323 ccggcggtgctccggctcttcttccatgactgcctcgtcaa 363 ||||| || ||||| ||||||||||| |||||| ||||||| Sbjct: 18265 ccggccgtcctccgcctcttcttccacgactgcttcgtcaa 18225 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 76908 ctccgcctcttcttccacgactgcttcgtcaa 76877 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 12383 ctccgcctcttcttccacgactgcttcgtcaa 12414
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct: 118464 cttccatgactgcttcgtccagggctgcgacgcctccgtcct 118505
>dbj|AK104448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H10, full insert sequence Length = 1230 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacg 374 |||| ||||||||||| |||||| ||||| |||| ||||||| Sbjct: 206 tccgcctcttcttccacgactgcttcgtcgatgggtgtgacg 247
>dbj|AK069503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J18, full insert sequence Length = 1398 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct: 255 cttccatgactgcttcgtccagggctgcgacgcctccgtcct 296
>dbj|AK060984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B02, full insert sequence Length = 1229 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtga 372 ||||||||||||| |||||||||| ||||| Sbjct: 258 cttccatgactgcttcgtcaatggttgtga 287
>dbj|AK060007.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C05, full insert sequence Length = 1234 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacg 374 |||| ||||||||||| |||||| ||||| |||| ||||||| Sbjct: 210 tccgcctcttcttccacgactgcttcgtcgatgggtgtgacg 251
>dbj|AK058884.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C04, full insert sequence Length = 1104 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacg 374 |||| ||||||||||| |||||| ||||| |||| ||||||| Sbjct: 62 tccgcctcttcttccacgactgcttcgtcgatgggtgtgacg 103
>tpe|BN000652.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx123 gene for class III peroxidase 123 precursor, exons 1-3 Length = 2260 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 tcgtcaccatcccggcggtgctccggctcttcttccatgactgcctcgtc 361 |||||||| ||||||| |||||| ||||||||||| |||||| ||||| Sbjct: 182 tcgtcaccgtcccggccacgctccgcctcttcttccacgactgcttcgtc 231
>tpe|BN000646.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx117 gene for class III peroxidase 117 precursor, exon 1 Length = 948 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct: 192 cttccatgactgcttcgtccagggctgcgacgcctccgtcct 233
>tpe|BN000612.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx83 gene for class III peroxidase 83 precursor, exons 1-2 Length = 1176 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 205 ctccgcctcttcttccacgactgcttcgtcaatg 238
>tpe|BN000556.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx27 gene for class III peroxidase 27 precursor, exons 1-3 Length = 1821 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatg 365 ||||| ||||||||||| |||||| ||||||||| Sbjct: 190 ctccgcctcttcttccacgactgcttcgtcaatg 223
>ref|NM_125226.2| Arabidopsis thaliana peroxidase AT5G58400 mRNA, complete cds Length = 1184 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| || ||||||||||| ||| ||||||| |||||||| Sbjct: 244 ctccgactattcttccatgattgcttcgtcaacggctgtga 284
>ref|NM_114856.2| Arabidopsis thaliana peroxidase AT3G49960 mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| |||||| | |||||||| ||||| Sbjct: 261 ctccgtctcttcttccacgactgctttgtcaatggttgtga 301
>ref|NM_126140.2| Arabidopsis thaliana peroxidase AT5G67400 mRNA, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| || ||| |||||||||| ||||| Sbjct: 224 ctccgcctcttcttccacgattgcttcgtcaatggatgtga 264
>ref|NM_183630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgt 381 |||| ||||||||||| |||||| |||||| || |||||||| ||||| Sbjct: 206 tccgcctcttcttccacgactgcttcgtcagggggtgtgacgcgtccgt 254
>ref|NM_187573.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgc 375 ||||||||||||| ||||||| || |||||||| Sbjct: 192 cttccatgactgcttcgtcaagggatgtgacgc 224
>ref|NM_194555.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0015O22.21), mRNA Length = 981 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 344 ttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||||||||||| | |||||||| ||||||| |||| |||| Sbjct: 202 ttccatgactgctttgtcaatgggtgtgacggttccatcct 242
>ref|NM_194141.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1601 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 cggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 |||||||||||||| |||||| ||||| | ||||| ||||| Sbjct: 380 cggctcttcttccacgactgcttcgtcgacggctgcgacgc 420
>gb|BT018922.1| Zea mays clone Contig31.F mRNA sequence Length = 1367 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgc 375 ||||||||||||| ||||||| ||||| ||||| Sbjct: 256 cttccatgactgcttcgtcaagggctgcgacgc 288
>emb|X98928.1|ATPEROX10 A.thaliana mRNA for peroxidase ATP10a Length = 1242 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| || ||| |||||||||| ||||| Sbjct: 222 ctccgcctcttcttccacgattgcttcgtcaatggatgtga 262
>emb|X98323.1|ATPRXR11G A.thaliana mRNA for peroxidase, prxr11 Length = 1241 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| || ||| |||||||||| ||||| Sbjct: 222 ctccgcctcttcttccacgattgcttcgtcaatggatgtga 262
>emb|X98807.1|ATATP21A A.thaliana mRNA for peroxidase ATP21a Length = 1189 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| ||||||||||| |||||| | |||||||| ||||| Sbjct: 232 ctccgtctcttcttccacgactgctttgtcaatggttgtga 272
>gb|BT008527.1| Arabidopsis thaliana clone U50864 putative peroxidase (At5g58400) mRNA, complete cds Length = 1009 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| || ||||||||||| ||| ||||||| |||||||| Sbjct: 193 ctccgactattcttccatgattgcttcgtcaacggctgtga 233
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 20935110 tgctccgcctcttcttccacgactgcttcgtca 20935078
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 ggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 61253 ggctcttcttccacgactgcttcgtccagggctgcgacgcctccatcct 61301
>dbj|AK118274.1| Arabidopsis thaliana At5g58400 mRNA for putative peroxidase, complete cds, clone: RAFL19-57-B03 Length = 1184 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtga 372 ||||| || ||||||||||| ||| ||||||| |||||||| Sbjct: 244 ctccgactattcttccatgattgcttcgtcaacggctgtga 284
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 311 tgctccgcctcttcttccacgactgcttcgtca 343
>dbj|AK109054.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E08, full insert sequence Length = 1275 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcctg 385 |||| ||||||||||| |||||| |||||| || |||||||| ||| ||||| Sbjct: 303 tccgcctcttcttccacgactgcttcgtcaggggttgtgacgcgtccatcctg 355
>dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C10, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 ggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 329 ggctcttcttccacgactgcttcgtccagggctgcgacgcctccatcct 377
>dbj|AK099448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021P04, full insert sequence Length = 1193 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 344 ttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||||||||||| | |||||||| ||||||| |||| |||| Sbjct: 242 ttccatgactgctttgtcaatgggtgtgacggttccatcct 282
>dbj|AK064633.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H03, full insert sequence Length = 1164 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgc 375 ||||||||||||| ||||||| || |||||||| Sbjct: 246 cttccatgactgcttcgtcaagggatgtgacgc 278
>dbj|AK061511.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G05, full insert sequence Length = 1602 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 cggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 |||||||||||||| |||||| ||||| | ||||| ||||| Sbjct: 380 cggctcttcttccacgactgcttcgtcgacggctgcgacgc 420
>dbj|AK061206.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B12, full insert sequence Length = 1170 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 344 ttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||||||||||| | |||||||| ||||||| |||| |||| Sbjct: 219 ttccatgactgctttgtcaatgggtgtgacggttccatcct 259
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 cggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 |||||||||||||| |||||| ||||| | ||||| ||||| Sbjct: 36205 cggctcttcttccacgactgcttcgtcgacggctgcgacgc 36245
>gb|AY109037.1| Zea mays PCO106247 mRNA sequence Length = 1555 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 343 cttccatgactgcctcgtcaatggctgtgacgc 375 ||||||||||||| ||||||| ||||| ||||| Sbjct: 430 cttccatgactgcttcgtcaagggctgcgacgc 462
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 215 tgctccgcctcttcttccacgactgcttcgtca 247
>tpe|BN000627.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx98 gene for class III peroxidase 98 precursor, exons 1-3 Length = 2641 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 cggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 |||||||||||||| |||||| ||||| | ||||| ||||| Sbjct: 202 cggctcttcttccacgactgcttcgtcgacggctgcgacgc 242
>tpe|BN000613.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx84 gene for class III peroxidase 84 precursor, exons 1-2 Length = 1087 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 323 ccggcggtgctccggctcttcttccatgactgcctcgtcaa 363 ||||| || ||||| ||||||||||| |||||| ||||||| Sbjct: 196 ccggccgtcctccgcctcttcttccacgactgcttcgtcaa 236
>tpe|BN000559.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx30 gene for class III peroxidase 30 precursor, exons 1-2 Length = 1059 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 ggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 ||||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 194 ggctcttcttccacgactgcttcgtccagggctgcgacgcctccatcct 242
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 20861318 tgctccgcctcttcttccacgactgcttcgtca 20861286
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 20594 tgctccgcctcttcttccacgactgcttcgtca 20562
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tgctccggctcttcttccatgactgcctcgtca 362 ||||||| ||||||||||| |||||| |||||| Sbjct: 23885 tgctccgcctcttcttccacgactgcttcgtca 23917
>dbj|D14481.1|RICPRXRPAA Oryza sativa (japonica cultivar-group) prxRPA mRNA for putative peroxidase, complete cds Length = 1204 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 344 ttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||||||||||| | |||||||| ||||||| |||| |||| Sbjct: 210 ttccatgactgctttgtcaatgggtgtgacggttccatcct 250
>ref|NM_188343.1| Oryza sativa (japonica cultivar-group), Ozsa8094 predicted mRNA Length = 960 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 163 ctccgcctcttcttccacgactgcttcgtcaa 194
>ref|XM_474177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 ||||| ||||||||||| |||||| |||||| || |||||||| Sbjct: 211 ctccgcctcttcttccacgactgcttcgtcagggggtgtgacgc 254
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggccggcctcctccccttgc 86 |||||||||||||||||||| Sbjct: 423328 ggccggcctcctccccttgc 423309 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ggccggcctcctccccttgc 86 |||||||||||||||||||| Sbjct: 416350 ggccggcctcctccccttgc 416331
>gb|AF020275.1| Homo sapiens expanded SCA7 CAG repeat Length = 477 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 344 cgtgtgcgccgtggcggcggtggc 321
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gaagaagaacgagacgatcg 314 |||||||||||||||||||| Sbjct: 50549 gaagaagaacgagacgatcg 50568
>ref|XM_949090.1| Theileria annulata strain Ankara hypothetical protein (TA20115) partial mRNA Length = 831 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 agctggaggacatcgtgctg 280 |||||||||||||||||||| Sbjct: 671 agctggaggacatcgtgctg 690
>emb|Z84480.1|HS418A9 Human DNA sequence from clone RP3-418A9 on chromosome 6q21 Contains a pseudogene similar to calponin proteins, the 5' part of gene KIAA1028 and a CpG island, complete sequence Length = 121424 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgaaggaggtgaccaggaag 298 |||||||||||||||||||| Sbjct: 108336 tgaaggaggtgaccaggaag 108317
>emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G3 on chromosome 1q42.11-42.3 Contains STSs and GSSs, complete sequence Length = 127639 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tcgtgctgaaggaggtgacc 292 |||||||||||||||||||| Sbjct: 2543 tcgtgctgaaggaggtgacc 2562
>emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chromosome 11 Contains three novel genes and a CpG island, complete sequence Length = 193223 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaaggaggtgaccaggaagaagaa 303 ||||||||||| |||||||||||| Sbjct: 153096 gaaggaggtgaacaggaagaagaa 153119
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cggtcgtcgtgcccggtgtc 58 |||||||||||||||||||| Sbjct: 19847 cggtcgtcgtgcccggtgtc 19828
>dbj|AK125397.1| Homo sapiens cDNA FLJ43408 fis, clone OCBBF2020801, highly similar to Ataxin 7 Length = 2315 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 1497 cgtgtgcgccgtggcggcggtggc 1474
>ref|NM_000333.2| Homo sapiens ataxin 7 (ATXN7), mRNA Length = 4416 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 729 cgtgtgcgccgtggcggcggtggc 706
>dbj|AK154829.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107O20 product:genetic suppressor element 1, full insert sequence Length = 4491 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggcggtggccctggtcgccg 182 |||||||||||||||||||| Sbjct: 201 ggcggtggccctggtcgccg 182
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 5788713 ctccgcctcttcttccacgactgcttcgtcaa 5788744 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aggaggtgaccaggaagaag 301 |||||||||||||||||||| Sbjct: 5403003 aggaggtgaccaggaagaag 5403022
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aggaggtgaccaggaagaag 301 |||||||||||||||||||| Sbjct: 154347 aggaggtgaccaggaagaag 154366
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 113415 ctccgcctcttcttccacgactgcttcgtcaa 113446
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 4013 ctccgcctcttcttccacgactgcttcgtcaa 3982
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 338 ctcttcttccatgactgcctcgtcaatg 365 |||||||||||||| ||| ||||||||| Sbjct: 82208 ctcttcttccatgattgcttcgtcaatg 82181
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 68283 gctccgcctcttcttccacgactgcttcgtca 68314
>dbj|AK105932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B03, full insert sequence Length = 1258 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 381 ctccgcctcttcttccacgactgcttcgtcaa 412
>dbj|AK104754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F11, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 357 gctccgcctcttcttccacgactgcttcgtca 388
>dbj|AK104645.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G11, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 5.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 344 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcgtccatcct 395
>dbj|AK067000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I12, full insert sequence Length = 1239 Score = 40.1 bits (20), Expect = 5.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 333 tccggctcttcttccatgactgcctcgtcaatggctgtgacgcttccgtcct 384 |||| ||||||||||| |||||| ||||| | ||||| ||||| ||| |||| Sbjct: 344 tccgcctcttcttccacgactgcttcgtccagggctgcgacgcgtccatcct 395
>dbj|AK064918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M23, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 360 gctccgcctcttcttccacgactgcttcgtca 391
>emb|BX901888.8| Zebrafish DNA sequence from clone CH211-235J18 in linkage group 20, complete sequence Length = 49475 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 agaaacggagaagaagcgtgtgcg 155 |||||||||||||||| ||||||| Sbjct: 28527 agaaacggagaagaagtgtgtgcg 28550
>dbj|AK060687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H05, full insert sequence Length = 1183 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 288 ctccgcctcttcttccacgactgcttcgtcaa 319
>dbj|AK058886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C06, full insert sequence Length = 1316 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaatggctgtgacgc 375 ||||| ||||||||||| |||||| |||||| || |||||||| Sbjct: 293 ctccgcctcttcttccacgactgcttcgtcagggggtgtgacgc 336
>gb|AY104176.1| Zea mays PCO083783 mRNA sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 296 gctccgcctcttcttccacgactgcttcgtca 327
>tpe|BN000619.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx90 gene for class III peroxidase 90 precursor, exons 1-4 Length = 2690 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 gctccggctcttcttccatgactgcctcgtca 362 |||||| ||||||||||| |||||| |||||| Sbjct: 207 gctccgcctcttcttccacgactgcttcgtca 238
>tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx86 gene for class III peroxidase 86 precursor, exons 1-3 Length = 1188 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 338 ctcttcttccatgactgcctcgtcaatg 365 |||||||||||||| ||| ||||||||| Sbjct: 205 ctcttcttccatgattgcttcgtcaatg 232
>tpe|BN000614.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx85 gene for class III peroxidase 85 precursor, exons 1-2 Length = 1052 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 181 ctccgcctcttcttccacgactgcttcgtcaa 212
>tpe|BN000611.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx82 gene for class III peroxidase 82 precursor, exons 1-2 Length = 1110 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 214 ctccgcctcttcttccacgactgcttcgtcaa 245
>tpe|BN000531.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx2 gene for class III peroxidase 2 precursor, exons 1-3 Length = 1105 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 332 ctccggctcttcttccatgactgcctcgtcaa 363 ||||| ||||||||||| |||||| ||||||| Sbjct: 163 ctccgcctcttcttccacgactgcttcgtcaa 194
>gb|AF032105.1|AF032105 Homo sapiens ataxin-7 (SCA7) mRNA, complete cds Length = 3367 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 729 cgtgtgcgccgtggcggcggtggc 706
>gb|AF032102.1|AF032102 Homo sapiens ataxin-7 (SCA7) gene, partial cds Length = 2172 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 1451 cgtgtgcgccgtggcggcggtggc 1428
>gb|AF020276.1|AF020276 Homo sapiens spinocerebellar ataxia 7 (SCA7) gene, partial cds Length = 1864 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 1091 cgtgtgcgccgtggcggcggtggc 1068
>emb|AJ000517.1|HSSCA7 Homo Sapiens mRNA for spinocerebellar ataxia 7 Length = 3969 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 737 cgtgtgcgccgtggcggcggtggc 714
>gb|AC012557.23| Homo sapiens 3 BAC RP11-245J9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189220 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgtgtgcgccgtagcggcggtggc 171 |||||||||||| ||||||||||| Sbjct: 69975 cgtgtgcgccgtggcggcggtggc 69952 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,429,656 Number of Sequences: 3902068 Number of extensions: 2429656 Number of successful extensions: 41499 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40951 Number of HSP's gapped (non-prelim): 548 length of query: 401 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 379 effective length of database: 17,147,199,772 effective search space: 6498788713588 effective search space used: 6498788713588 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
