ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 42 1.6
2emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.6
3gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 42 1.6
4dbj|AK002735.1| Mus musculus adult male kidney cDNA, RIKEN full-... 42 1.6
5gb|AF279672.1|AF279672 Mus musculus vanilloid receptor-like prot... 42 1.6
6gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, c... 42 1.6
7gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, c... 42 1.6
8ref|XM_482257.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
9ref|XM_474049.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
10gb|BC000628.2| Homo sapiens COMM domain containing 7, mRNA (cDNA... 40 6.4
11gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, co... 40 6.4
12gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, com... 40 6.4
13gb|AC146201.2| Pan troglodytes BAC clone RP43-34J1 from 7, compl... 40 6.4
14gb|AC117612.9| Mus musculus chromosome 19, clone RP23-103G8, com... 40 6.4
15gb|AC004864.1| Homo sapiens PAC clone RP4-721B17 from 7, complet... 40 6.4
16ref|XM_977783.1| PREDICTED: Mus musculus RIKEN cDNA 2210018M03 g... 40 6.4
17gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
18gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.4
19emb|CR974431.11| Pig DNA sequence from clone CH242-511J12 on chr... 40 6.4
20gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, com... 40 6.4
21emb|BX640505.3| Human DNA sequence from clone WI2-82760E2 on chr... 40 6.4
22emb|AL353684.8| Human DNA sequence from clone RP11-275A14 on chr... 40 6.4
23emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.4
24gb|BC047440.1| Homo sapiens COMM domain containing 7, mRNA (cDNA... 40 6.4
25emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
26emb|AJ720502.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.4
27ref|NM_001006237.1| Gallus gallus Ran GTPase activating protein ... 40 6.4
28dbj|AK097059.1| Homo sapiens cDNA FLJ39740 fis, clone SMINT2016477 40 6.4
29dbj|AK096307.1| Homo sapiens cDNA FLJ38988 fis, clone NT2RI2006973 40 6.4
30dbj|AK027893.1| Homo sapiens cDNA FLJ14987 fis, clone Y79AA1001077 40 6.4
31dbj|AK159396.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 6.4
32gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 6.4
33gb|BC051586.1| Mus musculus cDNA clone IMAGE:5058687 40 6.4
34dbj|AK077458.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 6.4
35dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
38gb|AC055725.22| Homo sapiens 3 BAC RP11-470E12 (Roswell Park Can... 40 6.4
39gb|AC123963.4| Macaca mulatta clone CH250-246J11, complete sequence 40 6.4
40ref|NM_053041.1| Homo sapiens COMM domain containing 7 (COMMD7),... 40 6.4
41gb|AF115564.1|HSSMTNS14 Homo sapiens smoothelin (SMTN) gene, exo... 40 6.4
42dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.4
43dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
44dbj|AK110830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
45dbj|AK108202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
46gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22,... 40 6.4
47gb|AC151530.2| Mus musculus BAC clone RP24-330K6 from 13, comple... 40 6.4
48gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, com... 40 6.4
49gb|AC026949.21| Mus musculus chromosome 7, clone RP23-103E11, co... 40 6.4
50dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.4
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
52gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, com... 40 6.4
53ref|NM_001013012.1| Mus musculus RIKEN cDNA 2210018M03 gene (221... 40 6.4
54dbj|AB209643.1| Homo sapiens mRNA for smoothelin isoform b varia... 40 6.4
55emb|AL807779.12| Mouse DNA sequence from clone RP23-82E21 on chr... 40 6.4 
>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 365  ccggccgcgtcctcctcctgc 385
            |||||||||||||||||||||
Sbjct: 6051 ccggccgcgtcctcctcctgc 6031
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 419    cggcctgccgcggcccacgccgatgcccg 447
              |||| |||||||||||||||||| |||||
Sbjct: 148914 cggcgtgccgcggcccacgccgaagcccg 148886
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>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete
             sequence
          Length = 206093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 365   ccggccgcgtcctcctcctgc 385
             |||||||||||||||||||||
Sbjct: 37635 ccggccgcgtcctcctcctgc 37655
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>dbj|AK002735.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610033B08 product:transient receptor
           potential cation channel, subfamily V, member 4, full
           insert sequence
          Length = 1064

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 365 ccggccgcgtcctcctcctgc 385
           |||||||||||||||||||||
Sbjct: 41  ccggccgcgtcctcctcctgc 21
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>gb|AF279672.1|AF279672 Mus musculus vanilloid receptor-like protein 2 (Vrl2) mRNA,
           complete cds
          Length = 3231

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 365 ccggccgcgtcctcctcctgc 385
           |||||||||||||||||||||
Sbjct: 25  ccggccgcgtcctcctcctgc 5
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>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence
          Length = 208462

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     ctcccccattctcccctctcc 64
              |||||||||||||||||||||
Sbjct: 168762 ctcccccattctcccctctcc 168782
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>gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, complete sequence
          Length = 166320

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ctcccccattctcccctctcc 64
             |||||||||||||||||||||
Sbjct: 53501 ctcccccattctcccctctcc 53521
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>ref|XM_482257.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cggccggtccgccggccgcg 373
           ||||||||||||||||||||
Sbjct: 920 cggccggtccgccggccgcg 901
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>ref|XM_474049.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1179

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 363 cgccggccgcgtcctcctcc 382
           ||||||||||||||||||||
Sbjct: 24  cgccggccgcgtcctcctcc 43
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>gb|BC000628.2| Homo sapiens COMM domain containing 7, mRNA (cDNA clone MGC:3046
            IMAGE:3343149), complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1275 gtttgagttcgagccaacca 1294
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>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   aggaaacagggggaatcaag 272
             ||||||||||||||||||||
Sbjct: 92214 aggaaacagggggaatcaag 92195
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>gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, complete sequence
          Length = 159817

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   ctctggggtgaccaggaaacaggg 263
             |||||||| |||||||||||||||
Sbjct: 19302 ctctggggggaccaggaaacaggg 19325
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>gb|AC146201.2| Pan troglodytes BAC clone RP43-34J1 from 7, complete sequence
          Length = 169640

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ttctcccctctcctgttcat 71
             ||||||||||||||||||||
Sbjct: 89122 ttctcccctctcctgttcat 89141
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>gb|AC117612.9| Mus musculus chromosome 19, clone RP23-103G8, complete sequence
          Length = 186038

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  tgctcttgcctcccagggca 338
            ||||||||||||||||||||
Sbjct: 9939 tgctcttgcctcccagggca 9920
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>gb|AC004864.1| Homo sapiens PAC clone RP4-721B17 from 7, complete sequence
          Length = 106795

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ttctcccctctcctgttcat 71
             ||||||||||||||||||||
Sbjct: 35956 ttctcccctctcctgttcat 35975
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>ref|XM_977783.1| PREDICTED: Mus musculus RIKEN cDNA 2210018M03 gene (2210018M03Rik),
            mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  aaacccttcccgcactccat 177
            ||||||||||||||||||||
Sbjct: 1646 aaacccttcccgcactccat 1627
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>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    tcgcggcctgccgcggccca 435
              ||||||||||||||||||||
Sbjct: 133865 tcgcggcctgccgcggccca 133846
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   gcccacgccgatgcccgctg 450
             ||||||||||||||||||||
Sbjct: 18557 gcccacgccgatgcccgctg 18538
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>emb|CR974431.11| Pig DNA sequence from clone CH242-511J12 on chromosome 17, complete
              sequence
          Length = 207434

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    tcctcctgccccgggctgcc 396
              ||||||||||||||||||||
Sbjct: 203026 tcctcctgccccgggctgcc 203007
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>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence
          Length = 156701

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    tgctcttgcctcccagggca 338
              ||||||||||||||||||||
Sbjct: 117256 tgctcttgcctcccagggca 117237
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>emb|BX640505.3| Human DNA sequence from clone WI2-82760E2 on chromosome 20, complete
             sequence
          Length = 41817

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gtttgagttcgagccaacca 25
             ||||||||||||||||||||
Sbjct: 24983 gtttgagttcgagccaacca 24964
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>emb|AL353684.8| Human DNA sequence from clone RP11-275A14 on chromosome 9, complete
             sequence
          Length = 110462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    attctcccctctcctgttca 70
             ||||||||||||||||||||
Sbjct: 87043 attctcccctctcctgttca 87062
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     atctgactcccccattctcc 57
              ||||||||||||||||||||
Sbjct: 394380 atctgactcccccattctcc 394361
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>gb|BC047440.1| Homo sapiens COMM domain containing 7, mRNA (cDNA clone MGC:48469
            IMAGE:5275167), complete cds
          Length = 1476

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1403 gtttgagttcgagccaacca 1422
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>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
             complete sequence
          Length = 123480

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   cgccggccgcgtcctcctcc 382
             ||||||||||||||||||||
Sbjct: 76246 cgccggccgcgtcctcctcc 76227
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>emb|AJ720502.1| Gallus gallus mRNA for hypothetical protein, clone 19c24
          Length = 2654

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  ctgagttctctgccgaggac 467
            ||||||||||||||||||||
Sbjct: 1965 ctgagttctctgccgaggac 1946
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>ref|NM_001006237.1| Gallus gallus Ran GTPase activating protein 1 (RANGAP1), mRNA
          Length = 2654

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  ctgagttctctgccgaggac 467
            ||||||||||||||||||||
Sbjct: 1965 ctgagttctctgccgaggac 1946
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>dbj|AK097059.1| Homo sapiens cDNA FLJ39740 fis, clone SMINT2016477
          Length = 1987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1930 gtttgagttcgagccaacca 1949
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>dbj|AK096307.1| Homo sapiens cDNA FLJ38988 fis, clone NT2RI2006973
          Length = 1888

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1831 gtttgagttcgagccaacca 1850
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>dbj|AK027893.1| Homo sapiens cDNA FLJ14987 fis, clone Y79AA1001077
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1289 gtttgagttcgagccaacca 1308
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>dbj|AK159396.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420019E14 product:TTF-I interacting
           peptide 20 (Fragment) homolog [Homo sapiens], full
           insert sequence
          Length = 1722

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 aaacccttcccgcactccat 177
           ||||||||||||||||||||
Sbjct: 828 aaacccttcccgcactccat 809
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      ctcccctctcctgttcatcc 73
               ||||||||||||||||||||
Sbjct: 1211279 ctcccctctcctgttcatcc 1211260
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>gb|BC051586.1| Mus musculus cDNA clone IMAGE:5058687
          Length = 904

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 aaacccttcccgcactccat 177
           ||||||||||||||||||||
Sbjct: 801 aaacccttcccgcactccat 820
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>dbj|AK077458.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730411P13 product:TTF-I
           INTERACTING PEPTIDE 20 (FRAGMENT) homolog [Homo
           sapiens], full insert sequence
          Length = 1864

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 aaacccttcccgcactccat 177
           ||||||||||||||||||||
Sbjct: 971 aaacccttcccgcactccat 952
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 363      cgccggccgcgtcctcctcc 382
                ||||||||||||||||||||
Sbjct: 32459445 cgccggccgcgtcctcctcc 32459426
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 416      tcgcggcctgccgcggccca 435
                ||||||||||||||||||||
Sbjct: 22981358 tcgcggcctgccgcggccca 22981339
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 354      cggccggtccgccggccgcg 373
                ||||||||||||||||||||
Sbjct: 19063879 cggccggtccgccggccgcg 19063898
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>gb|AC055725.22| Homo sapiens 3 BAC RP11-470E12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    ccaggaaacagggggaatcaagaa 274
              |||||||||||| |||||||||||
Sbjct: 154858 ccaggaaacaggaggaatcaagaa 154835
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>gb|AC123963.4| Macaca mulatta clone CH250-246J11, complete sequence
          Length = 155432

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ctcccctctcctgttcatcc 73
             ||||||||||||||||||||
Sbjct: 38410 ctcccctctcctgttcatcc 38391
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>ref|NM_053041.1| Homo sapiens COMM domain containing 7 (COMMD7), mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    gtttgagttcgagccaacca 25
            ||||||||||||||||||||
Sbjct: 1403 gtttgagttcgagccaacca 1422
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>gb|AF115564.1|HSSMTNS14 Homo sapiens smoothelin (SMTN) gene, exon 14
          Length = 490

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 catcaaacccttcccgcactccat 177
           ||||||||||||||| ||||||||
Sbjct: 56  catcaaacccttcccacactccat 79
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     atctgactcccccattctcc 57
              ||||||||||||||||||||
Sbjct: 447801 atctgactcccccattctcc 447782
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>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   cggccggtccgccggccgcg 373
             ||||||||||||||||||||
Sbjct: 88666 cggccggtccgccggccgcg 88685
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>dbj|AK110830.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A02, full
           insert sequence
          Length = 1499

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cggccggtccgccggccgcg 373
           ||||||||||||||||||||
Sbjct: 919 cggccggtccgccggccgcg 900
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>dbj|AK108202.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D01, full
           insert sequence
          Length = 1305

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 363 cgccggccgcgtcctcctcc 382
           ||||||||||||||||||||
Sbjct: 30  cgccggccgcgtcctcctcc 49
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>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence
          Length = 133893

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   catcaaacccttcccgcactccat 177
             ||||||||||||||| ||||||||
Sbjct: 81584 catcaaacccttcccacactccat 81561
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>gb|AC151530.2| Mus musculus BAC clone RP24-330K6 from 13, complete sequence
          Length = 155065

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    cccccattctcccctctcct 65
             ||||||||||||||||||||
Sbjct: 66115 cccccattctcccctctcct 66134
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>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence
          Length = 216104

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 240    ctctggggtgaccaggaaacaggg 263
              |||||||| |||||||||||||||
Sbjct: 131536 ctctggggggaccaggaaacaggg 131559
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>gb|AC026949.21| Mus musculus chromosome 7, clone RP23-103E11, complete sequence
          Length = 221070

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    aaacccttcccgcactccat 177
              ||||||||||||||||||||
Sbjct: 187813 aaacccttcccgcactccat 187832
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>dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-628J23, complete
             sequence
          Length = 165097

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tcccccattctcccctctcc 64
             ||||||||||||||||||||
Sbjct: 76377 tcccccattctcccctctcc 76358
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 416      tcgcggcctgccgcggccca 435
                ||||||||||||||||||||
Sbjct: 23291268 tcgcggcctgccgcggccca 23291249
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>gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, complete sequence
          Length = 199824

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     actcccccattctcccctct 62
              ||||||||||||||||||||
Sbjct: 102502 actcccccattctcccctct 102483
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>ref|NM_001013012.1| Mus musculus RIKEN cDNA 2210018M03 gene (2210018M03Rik), mRNA
          Length = 1899

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  aaacccttcccgcactccat 177
            ||||||||||||||||||||
Sbjct: 1003 aaacccttcccgcactccat 984
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>dbj|AB209643.1| Homo sapiens mRNA for smoothelin isoform b variant protein
          Length = 5290

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  catcaaacccttcccgcactccat 177
            ||||||||||||||| ||||||||
Sbjct: 2669 catcaaacccttcccacactccat 2692
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>emb|AL807779.12| Mouse DNA sequence from clone RP23-82E21 on chromosome X, complete
             sequence
          Length = 202297

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    cccccattctcccctctcct 65
             ||||||||||||||||||||
Sbjct: 53374 cccccattctcccctctcct 53355


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,996,875
Number of Sequences: 3902068
Number of extensions: 2996875
Number of successful extensions: 70004
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69773
Number of HSP's gapped (non-prelim): 231
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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