ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast43b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DAPB_BACLD (Q65I50) Dihydrodipicolinate reductase (EC 1.3.1.26) ... 29 6.9
2DAPB_BACSU (P42976) Dihydrodipicolinate reductase (EC 1.3.1.26) ... 28 9.1

>DAPB_BACLD (Q65I50) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 267

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 363 LRQADGVG-PAQGELIPSERGDDRDIVRLHSTR 458
           +R+A   G P + E++P  RG D++ +RLHS R
Sbjct: 178 VREAKTQGHPDEKEILPGARGADQNGIRLHSVR 210



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>DAPB_BACSU (P42976) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 267

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 333 AAALGQVPRELRQADGVGPAQGELIPSERGDDRDIVRLHSTR 458
           A  + +V +E +Q     P + E++P  RG +++ +RLHS R
Sbjct: 172 AEMISEVRKEKQQGH---PDEKEILPGARGAEQNGIRLHSVR 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.130    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,377,149
Number of Sequences: 219361
Number of extensions: 799933
Number of successful extensions: 1618
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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