>CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 126 PLPYFILGLLGILPRRCLHPVPGVLCRLIRTPSFLPFLPVGHGVSFYHDFSQCSGRFGFM 305
           PLP+ ++ L   L    L   PGVL RL+  P FL       GV     +S  +   GF+
Sbjct: 479 PLPFDVVPLFETLED--LRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFL 536

>CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 126 PLPYFILGLLGILPRRCLHPVPGVLCRLIRTPSFLPFLPVGHGVSFYHDFSQCSGRFGFM 305
           PLP+ ++ L   L    L   PGVL RL+  P FL       GV     +S  +   GF+
Sbjct: 479 PLPFDVVPLFETLED--LRRAPGVLRRLLENPVFLAHARGRGGVEVMIGYSDSNKDAGFL 536

>CAR12_HUMAN (Q9NPP4) Caspase recruitment domain-containing protein 12 (Ice|
           protease-activating factor) (Ipaf) (CARD, LRR, and
           NACHT-containing protein) (Clan protein)
          Length = 1024

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 207 LIRTPSFLPFLPVGHGVSFYHDFSQCSGRFGFMAKESWHHKLRRL 341
           L  TPSFL F P+G  +    +            K+  HH++ +L
Sbjct: 108 LYHTPSFLNFYPLGEDIDIIFNLKSTFTEPVLWRKDQHHHRVEQL 152

>FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1042

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +3

Query: 120 PAPLPYFILGLLGILPRRCLHPVPGVLCRLIRTPS-----FLPFLPV 245
           P PLP    GLLG+LP      VP  +CRL   PS        FLPV
Sbjct: 187 PDPLPDSYYGLLGMLP---CQEVPSHICRL---PSEVLRHIFAFLPV 227

>VE3_BPV2 (P11300) Probable protein E3|
          Length = 95

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 105 SGHASPAPLPYFILGLLGILPRRCLHPVPG 194
           +G +SPAPLP F   L G+    CLHP  G
Sbjct: 34  TGRSSPAPLP-FSCRLGGLSSPLCLHPGAG 62

>MDTH_PHOLL (Q7N568) Multidrug resistance protein mdtH|
          Length = 401

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 105 SGHASPAP-LPYFILGLLGILPRRCLH 182
           +GHA   P LP+F+LG++G++    LH
Sbjct: 359 TGHALNIPQLPWFLLGIIGLITLYALH 385

>TRPA_BACSK (Q5WGS0) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 269

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +3

Query: 144 LGLLGILPRRCLHPVPGVLCRLIRTPSFLPFLPVGHGVSFYHDFSQ 281
           LG+ G   R+ LHP      +L++  S +PF+ VG G+S Y    +
Sbjct: 175 LGVTGA--RKTLHPQVEAFLKLVKEASPVPFV-VGFGISSYEQVEE 217

>TRMB_RHOPA (Q6NCM9) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 265

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 322 CHDSLAMKPKRPEHWLKSW*KLTPCPTGRKGRKEGVRISRQR 197
           C D LA   +R + W K W   T    GRK  +EG R +  R
Sbjct: 223 CFDWLA---QRADDWRKPWPNYTMTRYGRKAEREGRRANYLR 261

>NQO12_THET8 (Q56227) NADH-quinone oxidoreductase subunit 12 (EC 1.6.99.5) (NADH|
           dehydrogenase I chain 12) (NDH-1 subunit 12)
          Length = 606

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 129 LPYFILGLLGILPRRCLHPVPGVLCRLIRTPSFL 230
           LP     LLG+  +R   P+PGVL   +   SFL
Sbjct: 9   LPLLGFALLGLFGKRMREPLPGVLASGLVLASFL 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,332,212
Number of Sequences: 219361
Number of extensions: 684845
Number of successful extensions: 1679
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)